RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 PCDH12Q9NPG4 1184 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 KLC4Q9NSK0 619 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 G3BP2Q9UN86 482 aaKnown RBP10.37□□□□□ -0.75
TSC1-207ENST00000493467 EXOC7Q9UPT5 735 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 ARID2Q68CP9 1835 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 YDJCA8MPS7 323 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 TMEM110-MUSTN1A8MSY1 372 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 H0YIN7 160 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 DDX39AO00148 427 aaKnown RBP10.37□□□□□ -0.75
TSC1-207ENST00000493467 ATMINO43313 823 aaPredicted RBP10.37□□□□□ -0.75
TSC1-207ENST00000493467 GSTA1P08263 222 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 HSD3B2P26439 372 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 GTF2H1P32780 548 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 RWDD2BP57060 319 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 XRCC4Q13426 336 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 TKFCQ3LXA3 575 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 PCNX4Q63HM2 1172 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 KRT39Q6A163 491 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 KRT27Q7Z3Y8 459 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 PIGWQ7Z7B1 504 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 MAP4K3Q8IVH8 894 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 C4orf19Q8IY42 314 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 MDM1Q8TC05 714 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 HELQQ8TDG4 1101 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 C7orf43Q8WVR3 580 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 ZNF653Q96CK0 615 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 CCDC114Q96M63 670 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 SEMA4AQ9H3S1 761 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 TMEM8AQ9HCN3 771 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 MAP3K20Q9NYL2 800 aaKnown RBP10.37□□□□□ -0.75
TSC1-207ENST00000493467 WHRNQ9P202 907 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 COL20A1Q9P218 1284 aa10.37□□□□□ -0.75
TSC1-207ENST00000493467 ASTN2O75129 1339 aaPredicted RBP10.36□□□□□ -0.75
TSC1-207ENST00000493467 PHF20L1A8MW92 1017 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 DNM1LO00429 736 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 FSCN2O14926 492 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 CHUKO15111 745 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 SPOPO43791 374 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 ECEL1O95672 775 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 RARAP10276 462 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 CYP11B1P15538 503 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 MPSTP25325 297 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 MAN1A1P33908 653 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 CAP2P40123 477 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 SCTRP47872 440 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 PDE6CP51160 858 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 MNAT1P51948 309 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 SPRED3Q2MJR0 410 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 FKBP1CQ5VVH2 108 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 SYDE1Q6ZW31 735 aaPredicted RBP10.36□□□□□ -0.75
TSC1-207ENST00000493467 MIGA2Q7L4E1 593 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 TAOK1Q7L7X3 1001 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 RETREG3Q86VR2 466 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 IL31RAQ8NI17 732 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 MAIP1Q8WWC4 291 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 CLEC4DQ8WXI8 215 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 DDX1Q92499 740 aaKnown RBP10.36□□□□□ -0.75
TSC1-207ENST00000493467 CNKSR1Q969H4 720 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 FBXL18Q96ME1 805 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 PLVAPQ9BX97 442 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 ANKEF1Q9NU02 776 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 TBC1D22BQ9NU19 505 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 ZNF70Q9UC06 446 aaPredicted RBP10.36□□□□□ -0.75
TSC1-207ENST00000493467 CCPG1Q9ULG6 757 aa10.36□□□□□ -0.75
TSC1-207ENST00000493467 TCP10L2B9ZVM9 353 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 ANKRD63C9JTQ0 380 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 CYP26A1O43174 497 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 IGHA2P01877 340 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 WEE1P30291 646 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 YWHABP31946 246 aaKnown RBP10.35□□□□□ -0.75
TSC1-207ENST00000493467 AUHQ13825 339 aaKnown RBP10.35□□□□□ -0.75
TSC1-207ENST00000493467 SNRNP35Q16560 246 aaKnown RBP10.35□□□□□ -0.75
TSC1-207ENST00000493467 KCTD19Q17RG1 926 aaPredicted RBP10.35□□□□□ -0.75
TSC1-207ENST00000493467 MAP7D1Q3KQU3 841 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 RHBDF2Q6PJF5 856 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 RNF207Q6ZRF8 634 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 SLC47A2Q86VL8 602 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 CCDC50Q8IVM0 306 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 CCDC105Q8IYK2 499 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 PPM1KQ8N3J5 372 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 ZSWIM2Q8NEG5 633 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 MAGEC3Q8TD91 643 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 PARD3BQ8TEW8 1205 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 SEMA4DQ92854 862 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 NT5C1BQ96P26 610 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 SELENOSQ9BQE4 189 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 NSRP1Q9H0G5 558 aaKnown RBP10.35□□□□□ -0.75
TSC1-207ENST00000493467 AVENQ9NQS1 362 aaPredicted RBP10.35□□□□□ -0.75
TSC1-207ENST00000493467 FBXO28Q9NVF7 368 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 TCRBV7S2A1N4TA0A589 114 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 CCT8L1PA6NM43 557 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 RASGRF2O14827 1237 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 JAK3P52333 1124 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 MRPS9P82933 396 aaKnown RBP10.35□□□□□ -0.75
TSC1-207ENST00000493467 MAP2K1Q02750 393 aaPredicted RBP10.35□□□□□ -0.75
TSC1-207ENST00000493467 SPP2Q13103 211 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 CLEC16AQ2KHT3 1053 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 OXLD1Q5BKU9 147 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 ACAD10Q6JQN1 1059 aa10.35□□□□□ -0.75
TSC1-207ENST00000493467 ENOSF1Q7L5Y1 443 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms