RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, human

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC3-223	ENST00000492275	LTBR	P36941	435 aa		28.01	■■■□□ 2.07
TTC3-223	ENST00000492275	DSG1	Q02413	1049 aa		28.01	■■■□□ 2.07
TTC3-223	ENST00000492275	SPATA1	Q5VX52	437 aa		28.01	■■■□□ 2.07
TTC3-223	ENST00000492275	HS2ST1	Q7LGA3	356 aa		28.01	■■■□□ 2.07
TTC3-223	ENST00000492275	C12orf56	Q8IXR9	622 aa		28.01	■■■□□ 2.07
TTC3-223	ENST00000492275	EFHB	Q8N7U6	833 aa		28.01	■■■□□ 2.07
TTC3-223	ENST00000492275	FBXL18	Q96ME1	805 aa		28.01	■■■□□ 2.07
TTC3-223	ENST00000492275	GSDMA	Q96QA5	445 aa		28.01	■■■□□ 2.07
TTC3-223	ENST00000492275	UBE2Z	Q9H832	354 aa	Predicted RBP	28.01	■■■□□ 2.07
TTC3-223	ENST00000492275	RBAK	Q9NYW8	714 aa	Predicted RBP	28.01	■■■□□ 2.07
TTC3-223	ENST00000492275	CGN	Q9P2M7	1197 aa	Known RBP	28.01	■■■□□ 2.07
TTC3-223	ENST00000492275	IL18RAP	O95256	599 aa		28	■■■□□ 2.07
TTC3-223	ENST00000492275	GLUD2	P49448	558 aa		28	■■■□□ 2.07
TTC3-223	ENST00000492275	TFF2	Q03403	129 aa		28	■■■□□ 2.07
TTC3-223	ENST00000492275	TMEM132D	Q14C87	1099 aa		28	■■■□□ 2.07
TTC3-223	ENST00000492275	USP41	Q3LFD5	358 aa		28	■■■□□ 2.07
TTC3-223	ENST00000492275	CBWD2	Q8IUF1	395 aa		28	■■■□□ 2.07
TTC3-223	ENST00000492275	EFCAB13	Q8IY85	973 aa		28	■■■□□ 2.07
TTC3-223	ENST00000492275	VN1R2	Q8NFZ6	395 aa		28	■■■□□ 2.07
TTC3-223	ENST00000492275	NOC3L	Q8WTT2	800 aa	Known RBP	28	■■■□□ 2.07
TTC3-223	ENST00000492275	CDCA3	Q99618	268 aa	Predicted RBP	28	■■■□□ 2.07
TTC3-223	ENST00000492275	MRPL17	Q9NRX2	175 aa	Known RBP	28	■■■□□ 2.07
TTC3-223	ENST00000492275	CLDND1	Q9NY35	253 aa		28	■■■□□ 2.07
TTC3-223	ENST00000492275	THEG	Q9P2T0	379 aa		28	■■■□□ 2.07
TTC3-223	ENST00000492275	HOOK1	Q9UJC3	728 aa	Known RBP	28	■■■□□ 2.07
TTC3-223	ENST00000492275	MAPK8IP1	Q9UQF2	711 aa		28	■■■□□ 2.07
TTC3-223	ENST00000492275	C2CD2	Q9Y426	696 aa		28	■■■□□ 2.07
TTC3-223	ENST00000492275	C2CD2L	O14523	706 aa		27.99	■■■□□ 2.07
TTC3-223	ENST00000492275	CLASP2	O75122	1294 aa	Known RBP	27.99	■■■□□ 2.07
TTC3-223	ENST00000492275	GLP2R	O95838	553 aa		27.99	■■■□□ 2.07
TTC3-223	ENST00000492275	UROD	P06132	367 aa		27.99	■■■□□ 2.07
TTC3-223	ENST00000492275	BRCC3	P46736	316 aa		27.99	■■■□□ 2.07
TTC3-223	ENST00000492275	CYP2J2	P51589	502 aa		27.99	■■■□□ 2.07
TTC3-223	ENST00000492275	RBM10	P98175	930 aa	Known RBP	27.99	■■■□□ 2.07
TTC3-223	ENST00000492275	DLX2	Q07687	328 aa	Predicted RBP	27.99	■■■□□ 2.07
TTC3-223	ENST00000492275	KCNC3	Q14003	757 aa		27.99	■■■□□ 2.07
TTC3-223	ENST00000492275	FAM171A1	Q5VUB5	890 aa		27.99	■■■□□ 2.07
TTC3-223	ENST00000492275	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	27.99	■■■□□ 2.07	3e-6	■■■■■ 28.8
TTC3-223	ENST00000492275	SMARCE1	Q969G3	411 aa		27.99	■■■□□ 2.07
TTC3-223	ENST00000492275	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	27.99	■■■□□ 2.07
TTC3-223	ENST00000492275	SCN1A	P35498	2009 aa		27.99	■■■□□ 2.07
TTC3-223	ENST00000492275	ZNF233	A6NK53	670 aa		27.98	■■■□□ 2.07
TTC3-223	ENST00000492275		I3L4J1	428 aa		27.98	■■■□□ 2.07
TTC3-223	ENST00000492275	XPOT	O43592	962 aa	Known RBP	27.98	■■■□□ 2.07
TTC3-223	ENST00000492275	SMC2	O95347	1197 aa		27.98	■■■□□ 2.07
TTC3-223	ENST00000492275	CNP	P09543	421 aa	Known RBP	27.98	■■■□□ 2.07
TTC3-223	ENST00000492275	RTP2	Q5QGT7	225 aa		27.98	■■■□□ 2.07
TTC3-223	ENST00000492275	KIAA1841	Q6NSI8	718 aa		27.98	■■■□□ 2.07
TTC3-223	ENST00000492275	SMYD4	Q8IYR2	804 aa	Predicted RBP	27.98	■■■□□ 2.07
TTC3-223	ENST00000492275	GUF1	Q8N442	669 aa	Known RBP	27.98	■■■□□ 2.07
TTC3-223	ENST00000492275	XXYLT1	Q8NBI6	393 aa		27.98	■■■□□ 2.07
TTC3-223	ENST00000492275	BEST2	Q8NFU1	509 aa		27.98	■■■□□ 2.07
TTC3-223	ENST00000492275	KLHL5	Q96PQ7	755 aa		27.98	■■■□□ 2.07
TTC3-223	ENST00000492275	KIAA1586	Q9HCI6	787 aa		27.98	■■■□□ 2.07
TTC3-223	ENST00000492275	PDE11A	Q9HCR9	933 aa		27.98	■■■□□ 2.07
TTC3-223	ENST00000492275	DMAC2	Q9NW81	257 aa		27.98	■■■□□ 2.07
TTC3-223	ENST00000492275	RMND1	Q9NWS8	449 aa		27.98	■■■□□ 2.07
TTC3-223	ENST00000492275	PDXK	O00764	312 aa		27.97	■■■□□ 2.07
TTC3-223	ENST00000492275	ELAVL2	Q12926	359 aa	Known RBP	27.97	■■■□□ 2.07
TTC3-223	ENST00000492275	EP400NL	Q6ZTU2	488 aa		27.97	■■■□□ 2.07
TTC3-223	ENST00000492275	RDH13	Q8NBN7	331 aa		27.97	■■■□□ 2.07
TTC3-223	ENST00000492275	GOLGA5	Q8TBA6	731 aa		27.97	■■■□□ 2.07
TTC3-223	ENST00000492275	TMEM174	Q8WUU8	243 aa		27.97	■■■□□ 2.07
TTC3-223	ENST00000492275	RXFP1	Q9HBX9	757 aa		27.97	■■■□□ 2.07
TTC3-223	ENST00000492275	LMBRD1	Q9NUN5	540 aa		27.97	■■■□□ 2.07
TTC3-223	ENST00000492275	SSX2IP	Q9Y2D8	614 aa		27.97	■■■□□ 2.07
TTC3-223	ENST00000492275	PPEF2	O14830	753 aa		27.96	■■■□□ 2.07
TTC3-223	ENST00000492275	TBX10	O75333	385 aa		27.96	■■■□□ 2.07
TTC3-223	ENST00000492275	KCNA5	P22460	613 aa		27.96	■■■□□ 2.07
TTC3-223	ENST00000492275	FGFR3	P22607	806 aa		27.96	■■■□□ 2.07
TTC3-223	ENST00000492275	CEP57	Q86XR8	500 aa		27.96	■■■□□ 2.07
TTC3-223	ENST00000492275	NT5DC4	Q86YG4	428 aa		27.96	■■■□□ 2.07
TTC3-223	ENST00000492275	GPR65	Q8IYL9	337 aa		27.96	■■■□□ 2.07
TTC3-223	ENST00000492275	ATXN2L	Q8WWM7	1075 aa	Known RBP	27.96	■■■□□ 2.07
TTC3-223	ENST00000492275	RIN2	Q8WYP3	895 aa	Predicted RBP	27.96	■■■□□ 2.07
TTC3-223	ENST00000492275	TTPAL	Q9BTX7	342 aa		27.96	■■■□□ 2.07
TTC3-223	ENST00000492275	CLEC1B	Q9P126	229 aa		27.96	■■■□□ 2.07
TTC3-223	ENST00000492275	TULP1	O00294	542 aa	Predicted RBP	27.95	■■■□□ 2.06
TTC3-223	ENST00000492275	KIF20A	O95235	890 aa		27.95	■■■□□ 2.06
TTC3-223	ENST00000492275	SNRNP35	Q16560	246 aa	Known RBP	27.95	■■■□□ 2.06
TTC3-223	ENST00000492275	ZNF658	Q5TYW1	1059 aa	Predicted RBP	27.95	■■■□□ 2.06
TTC3-223	ENST00000492275	C9orf57	Q5W0N0	161 aa		27.95	■■■□□ 2.06
TTC3-223	ENST00000492275	PRSS55	Q6UWB4	352 aa	Predicted RBP	27.95	■■■□□ 2.06
TTC3-223	ENST00000492275	TMEM184A	Q6ZMB5	413 aa		27.95	■■■□□ 2.06
TTC3-223	ENST00000492275	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	27.95	■■■□□ 2.06
TTC3-223	ENST00000492275	SLC9A9	Q8IVB4	645 aa		27.95	■■■□□ 2.06
TTC3-223	ENST00000492275	SLC22A17	Q8WUG5	538 aa		27.95	■■■□□ 2.06
TTC3-223	ENST00000492275	FAM84A	Q96KN4	292 aa		27.95	■■■□□ 2.06
TTC3-223	ENST00000492275	EMILIN2	Q9BXX0	1053 aa		27.95	■■■□□ 2.06
TTC3-223	ENST00000492275	DPP3	Q9NY33	737 aa		27.95	■■■□□ 2.06
TTC3-223	ENST00000492275	TRAF3IP3	Q9Y228	551 aa		27.95	■■■□□ 2.06
TTC3-223	ENST00000492275	PLXNA3	P51805	1871 aa		27.95	■■■□□ 2.06
TTC3-223	ENST00000492275	ANO9	A1A5B4	782 aa		27.94	■■■□□ 2.06
TTC3-223	ENST00000492275		H3BQ06	376 aa	Predicted RBP	27.94	■■■□□ 2.06
TTC3-223	ENST00000492275	PIR	O00625	290 aa		27.94	■■■□□ 2.06
TTC3-223	ENST00000492275	TRAPPC3	O43617	180 aa		27.94	■■■□□ 2.06
TTC3-223	ENST00000492275	PRCP	P42785	496 aa		27.94	■■■□□ 2.06
TTC3-223	ENST00000492275	LLGL2	Q6P1M3	1020 aa		27.94	■■■□□ 2.06
TTC3-223	ENST00000492275	LNX1	Q8TBB1	728 aa	Predicted RBP	27.94	■■■□□ 2.06
TTC3-223	ENST00000492275	PIK3R5	Q8WYR1	880 aa		27.94	■■■□□ 2.06

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms