RNA–Protein interactions for RNA: ENST00000492016.5

NELFCD-211, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 606 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-211ENST00000492016 C15orf39Q6ZRI6 1047 aa17.1■□□□□ 0.33
NELFCD-211ENST00000492016 C18orf25Q96B23 403 aaPredicted RBP17.1■□□□□ 0.33
NELFCD-211ENST00000492016 ZNF558Q96NG5 402 aa17.1■□□□□ 0.33
NELFCD-211ENST00000492016 PLVAPQ9BX97 442 aa17.1■□□□□ 0.33
NELFCD-211ENST00000492016 TMEM8AQ9HCN3 771 aa17.1■□□□□ 0.33
NELFCD-211ENST00000492016 STK39Q9UEW8 545 aa17.1■□□□□ 0.33
NELFCD-211ENST00000492016 PTPRSQ13332 1948 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 ANO9A1A5B4 782 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 LRRC10BA6NIK2 292 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 GOLGA6L19H0YKK7 550 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 ZC3H11AO75152 810 aaKnown RBP eCLIP17.09■□□□□ 0.33
NELFCD-211ENST00000492016 C4BPAP04003 597 aaKnown RBP17.09■□□□□ 0.33
NELFCD-211ENST00000492016 GALTP07902 379 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 TPM2P07951 284 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 PNPLA4P41247 253 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 BCAR1P56945 870 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 SOX4Q06945 474 aaPredicted RBP17.09■□□□□ 0.33
NELFCD-211ENST00000492016 MAN2A1Q16706 1144 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 UPP1Q16831 310 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 DCAF17Q5H9S7 520 aaPredicted RBP17.09■□□□□ 0.33
NELFCD-211ENST00000492016 TCERG1LQ5VWI1 586 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 KRT39Q6A163 491 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 DCLRE1AQ6PJP8 1040 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 KCNT2Q6UVM3 1135 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 TRAPPC11Q7Z392 1133 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 LRRC52Q8N7C0 313 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 C1orf127Q8N9H9 656 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 OR5B17Q8NGF7 314 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 ZNF516Q92618 1163 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 POP1Q99575 1024 aaKnown RBP17.09■□□□□ 0.33
NELFCD-211ENST00000492016 COLEC11Q9BWP8 271 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 MTMR12Q9C0I1 747 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 HSD3B7Q9H2F3 369 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 TUBGCP4Q9UGJ1 667 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 FAN1Q9Y2M0 1017 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 YBX2Q9Y2T7 364 aaKnown RBP17.09■□□□□ 0.33
NELFCD-211ENST00000492016 PCDHB12Q9Y5F1 795 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 PTPRJQ12913 1337 aa17.09■□□□□ 0.33
NELFCD-211ENST00000492016 TMEM265A0A087WTH1 108 aa17.08■□□□□ 0.32
NELFCD-211ENST00000492016 LCHNA4D1U4 455 aa17.08■□□□□ 0.32
NELFCD-211ENST00000492016 C5orf67F2Z3F1 127 aa17.08■□□□□ 0.32
NELFCD-211ENST00000492016 PIRO00625 290 aa17.08■□□□□ 0.32
NELFCD-211ENST00000492016 RB1P06400 928 aa17.08■□□□□ 0.32
NELFCD-211ENST00000492016 CA3P07451 260 aa17.08■□□□□ 0.32
NELFCD-211ENST00000492016 CDK11BP21127 795 aaKnown RBP17.08■□□□□ 0.32
NELFCD-211ENST00000492016 DNAJB2P25686 324 aa17.08■□□□□ 0.32
NELFCD-211ENST00000492016 BMPR1AP36894 532 aa17.08■□□□□ 0.32
NELFCD-211ENST00000492016 MTIF2P46199 727 aaKnown RBP17.08■□□□□ 0.32
NELFCD-211ENST00000492016 RBP5P82980 135 aa17.08■□□□□ 0.32
NELFCD-211ENST00000492016 PPP3CAQ08209 521 aa17.08■□□□□ 0.32
NELFCD-211ENST00000492016 CETN1Q12798 172 aa17.08■□□□□ 0.32
NELFCD-211ENST00000492016 SPOUT1Q5T280 376 aaKnown RBP17.08■□□□□ 0.32
NELFCD-211ENST00000492016 C9orf57Q5W0N0 161 aa17.08■□□□□ 0.32
NELFCD-211ENST00000492016 SV2AQ7L0J3 742 aa17.08■□□□□ 0.32
NELFCD-211ENST00000492016 LUZP1Q86V48 1076 aa17.08■□□□□ 0.32
NELFCD-211ENST00000492016 COLGALT1Q8NBJ5 622 aa17.08■□□□□ 0.32
NELFCD-211ENST00000492016 CXorf38Q8TB03 319 aa17.08■□□□□ 0.32
NELFCD-211ENST00000492016 TGS1Q96RS0 853 aaKnown RBP17.08■□□□□ 0.32
NELFCD-211ENST00000492016 TUBGCP2Q9BSJ2 902 aa17.08■□□□□ 0.32
NELFCD-211ENST00000492016 SLC28A3Q9HAS3 691 aa17.08■□□□□ 0.32
NELFCD-211ENST00000492016 DNAJB4Q9UDY4 337 aa17.08■□□□□ 0.32
NELFCD-211ENST00000492016 LIMA1Q9UHB6 759 aaKnown RBP17.08■□□□□ 0.32
NELFCD-211ENST00000492016 COQ4Q9Y3A0 265 aa17.08■□□□□ 0.32
NELFCD-211ENST00000492016 R3HCC1Q9Y3T6 440 aaKnown RBP17.08■□□□□ 0.32
NELFCD-211ENST00000492016 FNDC1Q4ZHG4 1894 aaPredicted RBP17.07■□□□□ 0.32
NELFCD-211ENST00000492016 CEP290O15078 2479 aa17.07■□□□□ 0.32
NELFCD-211ENST00000492016 CASTOR2A6NHX0 329 aa17.07■□□□□ 0.32
NELFCD-211ENST00000492016 PODXLO00592 558 aa17.07■□□□□ 0.32
NELFCD-211ENST00000492016 NRP1O14786 923 aa17.07■□□□□ 0.32
NELFCD-211ENST00000492016 B4GALT3O60512 393 aa17.07■□□□□ 0.32
NELFCD-211ENST00000492016 STAU1O95793 577 aaKnown RBP17.07■□□□□ 0.32
NELFCD-211ENST00000492016 AFPP02771 609 aaKnown RBP17.07■□□□□ 0.32
NELFCD-211ENST00000492016 TRIM49P0CI25 452 aa17.07■□□□□ 0.32
NELFCD-211ENST00000492016 TRIM49CP0CI26 452 aa17.07■□□□□ 0.32
NELFCD-211ENST00000492016 ATICP31939 592 aa17.07■□□□□ 0.32
NELFCD-211ENST00000492016 OR1G1P47890 313 aa17.07■□□□□ 0.32
NELFCD-211ENST00000492016 SLC11A1P49279 550 aa17.07■□□□□ 0.32
NELFCD-211ENST00000492016 MXI1P50539 228 aa17.07■□□□□ 0.32
NELFCD-211ENST00000492016 CLCNKBP51801 687 aa17.07■□□□□ 0.32
NELFCD-211ENST00000492016 ERVK-21P61565 698 aa17.07■□□□□ 0.32
NELFCD-211ENST00000492016 TAP1Q03518 808 aa17.07■□□□□ 0.32
NELFCD-211ENST00000492016 KCNH2Q12809 1159 aa17.07■□□□□ 0.32
NELFCD-211ENST00000492016 TDRD10Q5VZ19 366 aaKnown RBP17.07■□□□□ 0.32
NELFCD-211ENST00000492016 SLC39A11Q8N1S5 342 aa17.07■□□□□ 0.32
NELFCD-211ENST00000492016 TAF4BQ92750 862 aa17.07■□□□□ 0.32
NELFCD-211ENST00000492016 ZNF560Q96MR9 790 aa17.07■□□□□ 0.32
NELFCD-211ENST00000492016 SPG21Q9NZD8 308 aa17.07■□□□□ 0.32
NELFCD-211ENST00000492016 CITO14578 2027 aa17.07■□□□□ 0.32
NELFCD-211ENST00000492016 GTPBP10A4D1E9 387 aaKnown RBP17.06■□□□□ 0.32
NELFCD-211ENST00000492016 PHACTR2O75167 634 aa17.06■□□□□ 0.32
NELFCD-211ENST00000492016 ITGB3P05106 788 aa17.06■□□□□ 0.32
NELFCD-211ENST00000492016 MYOGP15173 224 aa17.06■□□□□ 0.32
NELFCD-211ENST00000492016 PBX2P40425 430 aa17.06■□□□□ 0.32
NELFCD-211ENST00000492016 GCLMP48507 274 aa17.06■□□□□ 0.32
NELFCD-211ENST00000492016 FMO5P49326 533 aa17.06■□□□□ 0.32
NELFCD-211ENST00000492016 PLCB3Q01970 1234 aa17.06■□□□□ 0.32
NELFCD-211ENST00000492016 ELAVL2Q12926 359 aaKnown RBP17.06■□□□□ 0.32
NELFCD-211ENST00000492016 BIRC3Q13489 604 aa17.06■□□□□ 0.32
NELFCD-211ENST00000492016 TRPC3Q13507 836 aa17.06■□□□□ 0.32
NELFCD-211ENST00000492016 VWA3BQ502W6 1294 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms