RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 RSPO2Q6UXX9 243 aaPredicted RBP12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 SIX5Q8N196 739 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 TMEM130Q8N3G9 435 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 FLCNQ8NFG4 579 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 PIK3R5Q8WYR1 880 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 LARP4BQ92615 738 aaKnown RBP12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 RAD54LQ92698 747 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 DRC1Q96MC2 740 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 PNMA5Q96PV4 448 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 PPP1R10Q96QC0 940 aaKnown RBP12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 ADPGKQ9BRR6 497 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 TTPALQ9BTX7 342 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 PRKD2Q9BZL6 878 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 CDT1Q9H211 546 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 MFSD1Q9H3U5 465 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 PLEKHA4Q9H4M7 779 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 C17orf75Q9HAS0 396 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 ZDHHC7Q9NXF8 308 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 EPS15L1Q9UBC2 864 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 HOOK1Q9UJC3 728 aaKnown RBP12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 TSC2P49815 1807 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 WDR87Q6ZQQ6 2873 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 PHLPP2Q6ZVD8 1323 aa12.06□□□□□ -0.48
TMEM39A-211ENST00000491685 PATJQ8NI35 1801 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 KRBA1A5PL33 1030 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 ABLIM1O14639 778 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 POLR2DO15514 142 aaKnown RBP12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 C1RP00736 705 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 PLCG1P19174 1290 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 SYKP43405 635 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 BRCC3P46736 316 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 ID4P47928 161 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 NPTX2P47972 431 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 SMTNP53814 917 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 OSTNP61366 133 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 TMEM119Q4V9L6 283 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 RINT1Q6NUQ1 792 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 CYP26C1Q6V0L0 522 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 GPR65Q8IYL9 337 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 PDILTQ8N807 584 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 HDAC7Q8WUI4 952 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 DHX58Q96C10 678 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 MAGEF1Q9HAY2 307 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 PIDD1Q9HB75 910 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 GDPD2Q9HCC8 539 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 PTPRHQ9HD43 1115 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 IGSF9Q9P2J2 1179 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 LARSQ9P2J5 1176 aaKnown RBP12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 ARHGAP28Q9P2N2 729 aa12.05□□□□□ -0.48
TMEM39A-211ENST00000491685 COL4A2P08572 1712 aa12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 CCDC169A6NNP5 214 aa12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 SFI1A8K8P3 1242 aa12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 H0YCG3 227 aa12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 CCL16O15467 120 aa12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 C8AP07357 584 aa12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 SCP2P22307 547 aa12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 FGFR3P22607 806 aa12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 GUCY2CP25092 1073 aa12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 TKTP29401 623 aaKnown RBP12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 ABCD1P33897 745 aa12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 EFNA5P52803 228 aa12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 HTR4Q13639 388 aa12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 ZNF568Q3ZCX4 644 aa12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 C1orf186Q6ZWK4 172 aa12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 USP49Q70CQ1 688 aa12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 GRASPQ7Z6J2 395 aaPredicted RBP12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 SLC44A3Q8N4M1 653 aa12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 STAMQ92783 540 aa12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 NKD2Q969F2 451 aaPredicted RBP12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 CCDC47Q96A33 483 aaKnown RBP12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 DDX27Q96GQ7 796 aaKnown RBP12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 ZMAT2Q96NC0 199 aaKnown RBP12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 ACO2Q99798 780 aaKnown RBP12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 RPP25Q9BUL9 199 aaKnown RBP12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 TARS2Q9BW92 718 aaKnown RBP12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 HCFC1R1Q9NWW0 138 aa12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 FBXL21Q9UKT6 434 aa12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 CA14Q9ULX7 337 aa12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 TNFSF13BQ9Y275 285 aa12.04□□□□□ -0.48
TMEM39A-211ENST00000491685 DNAH14Q0VDD8 3507 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 SMIM28A0A1B0GU29 152 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 A0A1B0GVL5 298 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 ANHXE9PGG2 379 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 TMEM189-UBE2V1I3L0A0 370 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 K7ERI5 159 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 SLC16A4O15374 487 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 PRPF40AO75400 957 aaKnown RBP12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 HARSP12081 509 aaKnown RBP12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 LAMP2P13473 410 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 AOC1P19801 751 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 PROZP22891 400 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 FSHRP23945 695 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 GRM5P41594 1212 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 CLCN5P51795 746 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 SLC12A3P55017 1021 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 CACNB1Q02641 598 aaPredicted RBP12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 RAD51AP2Q09MP3 1159 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 MCM6Q14566 821 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 UPP1Q16831 310 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms