RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 LIG4P49917 911 aa19.64■□□□□ 0.73
HMGN1-219ENST00000491183 TDGQ13569 410 aa19.64■□□□□ 0.73
HMGN1-219ENST00000491183 ZBTB6Q15916 424 aa19.64■□□□□ 0.73
HMGN1-219ENST00000491183 PPM1LQ5SGD2 360 aa19.64■□□□□ 0.73
HMGN1-219ENST00000491183 ZBTB41Q5SVQ8 909 aa19.64■□□□□ 0.73
HMGN1-219ENST00000491183 AXDND1Q5T1B0 1012 aaPredicted RBP19.64■□□□□ 0.73
HMGN1-219ENST00000491183 ANKS3Q6ZW76 656 aa19.64■□□□□ 0.73
HMGN1-219ENST00000491183 RSAD2Q8WXG1 361 aa19.64■□□□□ 0.73
HMGN1-219ENST00000491183 PLEKHA5Q9HAU0 1116 aa19.64■□□□□ 0.73
HMGN1-219ENST00000491183 EPS15L1Q9UBC2 864 aa19.64■□□□□ 0.73
HMGN1-219ENST00000491183 TUBGCP4Q9UGJ1 667 aa19.64■□□□□ 0.73
HMGN1-219ENST00000491183 STX6O43752 255 aa19.63■□□□□ 0.73
HMGN1-219ENST00000491183 TBC1D4O60343 1298 aa19.63■□□□□ 0.73
HMGN1-219ENST00000491183 HNRNPA1P09651 372 aaKnown RBP eCLIP19.63■□□□□ 0.73
HMGN1-219ENST00000491183 SCP2P22307 547 aa19.63■□□□□ 0.73
HMGN1-219ENST00000491183 AVPR2P30518 371 aa19.63■□□□□ 0.73
HMGN1-219ENST00000491183 NTHL1P78549 312 aa19.63■□□□□ 0.73
HMGN1-219ENST00000491183 GTF2BQ00403 316 aa19.63■□□□□ 0.73
HMGN1-219ENST00000491183 MRPL58Q14197 206 aaKnown RBP19.63■□□□□ 0.73
HMGN1-219ENST00000491183 SLC39A14Q15043 492 aa19.63■□□□□ 0.73
HMGN1-219ENST00000491183 ZC2HC1CQ53FD0 456 aaPredicted RBP19.63■□□□□ 0.73
HMGN1-219ENST00000491183 VARS2Q5ST30 1063 aaKnown RBP19.63■□□□□ 0.73
HMGN1-219ENST00000491183 LIN9Q5TKA1 542 aa19.63■□□□□ 0.73
HMGN1-219ENST00000491183 SLC39A4Q6P5W5 647 aa19.63■□□□□ 0.73
HMGN1-219ENST00000491183 GRASPQ7Z6J2 395 aaPredicted RBP19.63■□□□□ 0.73
HMGN1-219ENST00000491183 PRSS33Q8NF86 280 aa19.63■□□□□ 0.73
HMGN1-219ENST00000491183 IGSF9Q9P2J2 1179 aa19.63■□□□□ 0.73
HMGN1-219ENST00000491183 CCDC39Q9UFE4 941 aa19.63■□□□□ 0.73
HMGN1-219ENST00000491183 MORC2Q9Y6X9 1032 aaPredicted RBP19.63■□□□□ 0.73
HMGN1-219ENST00000491183 ZDBF2Q9HCK1 2354 aa19.62■□□□□ 0.73
HMGN1-219ENST00000491183 A0A0B4J269 797 aa19.62■□□□□ 0.73
HMGN1-219ENST00000491183 LACTBL1A8MY62 500 aa19.62■□□□□ 0.73
HMGN1-219ENST00000491183 ANKRD63C9JTQ0 380 aa19.62■□□□□ 0.73
HMGN1-219ENST00000491183 HNRNPDLO14979 420 aaKnown RBP19.62■□□□□ 0.73
HMGN1-219ENST00000491183 SYN3O14994 580 aa19.62■□□□□ 0.73
HMGN1-219ENST00000491183 OGTO15294 1046 aa19.62■□□□□ 0.73
HMGN1-219ENST00000491183 CCL16O15467 120 aa19.62■□□□□ 0.73
HMGN1-219ENST00000491183 TBCAO75347 108 aaKnown RBP19.62■□□□□ 0.73
HMGN1-219ENST00000491183 ADRB2P07550 413 aa19.62■□□□□ 0.73
HMGN1-219ENST00000491183 HOXA9P31269 272 aa19.62■□□□□ 0.73
HMGN1-219ENST00000491183 HOXD11P31277 338 aaPredicted RBP19.62■□□□□ 0.73
HMGN1-219ENST00000491183 NHLH1Q02575 133 aa19.62■□□□□ 0.73
HMGN1-219ENST00000491183 ENOX2Q16206 610 aaKnown RBP19.62■□□□□ 0.73
HMGN1-219ENST00000491183 UVSSAQ2YD98 709 aa19.62■□□□□ 0.73
HMGN1-219ENST00000491183 RRAGBQ5VZM2 374 aa19.62■□□□□ 0.73
HMGN1-219ENST00000491183 SLC8B1Q6J4K2 584 aa19.62■□□□□ 0.73
HMGN1-219ENST00000491183 DYMQ7RTS9 669 aa19.62■□□□□ 0.73
HMGN1-219ENST00000491183 SLC7A14Q8TBB6 771 aa19.62■□□□□ 0.73
HMGN1-219ENST00000491183 SNX21Q969T3 373 aa19.62■□□□□ 0.73
HMGN1-219ENST00000491183 SUSD3Q96L08 255 aa19.62■□□□□ 0.73
HMGN1-219ENST00000491183 ZSCAN16Q9H4T2 348 aaPredicted RBP19.62■□□□□ 0.73
HMGN1-219ENST00000491183 STK17AQ9UEE5 414 aa19.62■□□□□ 0.73
HMGN1-219ENST00000491183 NUB1Q9Y5A7 615 aa19.62■□□□□ 0.73
HMGN1-219ENST00000491183 WDFY4Q6ZS81 3184 aa19.62■□□□□ 0.73
HMGN1-219ENST00000491183 NOTCH4Q99466 2003 aa19.61■□□□□ 0.73
HMGN1-219ENST00000491183 MYMKA6NI61 221 aa19.61■□□□□ 0.73
HMGN1-219ENST00000491183 LAMP2P13473 410 aa19.61■□□□□ 0.73
HMGN1-219ENST00000491183 ROR1Q01973 937 aa19.61■□□□□ 0.73
HMGN1-219ENST00000491183 GET4Q7L5D6 327 aaPredicted RBP19.61■□□□□ 0.73
HMGN1-219ENST00000491183 MAP4K3Q8IVH8 894 aa19.61■□□□□ 0.73
HMGN1-219ENST00000491183 KRI1Q8N9T8 703 aaKnown RBP19.61■□□□□ 0.73
HMGN1-219ENST00000491183 IKZF4Q9H2S9 585 aa19.61■□□□□ 0.73
HMGN1-219ENST00000491183 ST6GALNAC4Q9H4F1 302 aa19.61■□□□□ 0.73
HMGN1-219ENST00000491183 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.61■□□□□ 0.73
HMGN1-219ENST00000491183 DUSP12Q9UNI6 340 aa19.61■□□□□ 0.73
HMGN1-219ENST00000491183 A0A087X0B3 334 aa19.6■□□□□ 0.73
HMGN1-219ENST00000491183 TISP43B9A030 160 aa19.6■□□□□ 0.73
HMGN1-219ENST00000491183 NARSO43776 548 aaKnown RBP19.6■□□□□ 0.73
HMGN1-219ENST00000491183 ABLIM3O94929 683 aa19.6■□□□□ 0.73
HMGN1-219ENST00000491183 FSHRP23945 695 aa19.6■□□□□ 0.73
HMGN1-219ENST00000491183 LRPAP1P30533 357 aa19.6■□□□□ 0.73
HMGN1-219ENST00000491183 KYAT1Q16773 422 aa19.6■□□□□ 0.73
HMGN1-219ENST00000491183 ZNF720Q7Z2F6 126 aa19.6■□□□□ 0.73
HMGN1-219ENST00000491183 SFR1Q86XK3 245 aa19.6■□□□□ 0.73
HMGN1-219ENST00000491183 SLC44A3Q8N4M1 653 aa19.6■□□□□ 0.73
HMGN1-219ENST00000491183 ZNF461Q8TAF7 563 aa19.6■□□□□ 0.73
HMGN1-219ENST00000491183 DDX12PQ92771 950 aa19.6■□□□□ 0.73
HMGN1-219ENST00000491183 DNAJC19Q96DA6 116 aa19.6■□□□□ 0.73
HMGN1-219ENST00000491183 KIF12Q96FN5 646 aa19.6■□□□□ 0.73
HMGN1-219ENST00000491183 PANK2Q9BZ23 570 aa19.6■□□□□ 0.73
HMGN1-219ENST00000491183 RPF1Q9H9Y2 349 aaKnown RBP19.6■□□□□ 0.73
HMGN1-219ENST00000491183 HCFC1R1Q9NWW0 138 aa19.6■□□□□ 0.73
HMGN1-219ENST00000491183 DNMT3BQ9UBC3 853 aaKnown RBP19.6■□□□□ 0.73
HMGN1-219ENST00000491183 CPSF3Q9UKF6 684 aaKnown RBP19.6■□□□□ 0.73
HMGN1-219ENST00000491183 POLIQ9UNA4 740 aa19.6■□□□□ 0.73
HMGN1-219ENST00000491183 WDR27A2RRH5 827 aa19.59■□□□□ 0.73
HMGN1-219ENST00000491183 POU2F2P09086 479 aa19.59■□□□□ 0.73
HMGN1-219ENST00000491183 CYP3A5P20815 502 aa19.59■□□□□ 0.73
HMGN1-219ENST00000491183 MCM4P33991 863 aa19.59■□□□□ 0.73
HMGN1-219ENST00000491183 NASPP49321 788 aaPredicted RBP19.59■□□□□ 0.73
HMGN1-219ENST00000491183 GUCY2FP51841 1108 aa19.59■□□□□ 0.73
HMGN1-219ENST00000491183 PPP2R3AQ06190 1150 aa19.59■□□□□ 0.73
HMGN1-219ENST00000491183 TCF15Q12870 199 aa19.59■□□□□ 0.73
HMGN1-219ENST00000491183 SV2BQ7L1I2 683 aa19.59■□□□□ 0.73
HMGN1-219ENST00000491183 RTL10Q7L3V2 364 aa19.59■□□□□ 0.73
HMGN1-219ENST00000491183 ST13P5Q8NFI4 369 aaPredicted RBP19.59■□□□□ 0.73
HMGN1-219ENST00000491183 MSTO1Q9BUK6 570 aa19.59■□□□□ 0.73
HMGN1-219ENST00000491183 STRA6Q9BX79 667 aa19.59■□□□□ 0.73
HMGN1-219ENST00000491183 FBXL5Q9UKA1 691 aa19.59■□□□□ 0.73
HMGN1-219ENST00000491183 UBQLN1Q9UMX0 589 aaKnown RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms