RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, human

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHC3-212	ENST00000490723	SGTA	O43765	313 aa		5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	RAMP2	O60895	175 aa		5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	ZRANB2	O95218	330 aa	Known RBP eCLIP	5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	ELANE	P08246	267 aa		5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	SBK3	P0C264	359 aa		5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	FGFR4	P22455	802 aa		5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	GCSH	P23434	173 aa		5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	BMPR1A	P36894	532 aa		5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	RECQL	P46063	649 aa	Predicted RBP	5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	ADK	P55263	362 aa	Known RBP	5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	ZNF280A	P59817	542 aa	Predicted RBP	5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	HSD11B2	P80365	405 aa		5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	GUCY1B3	Q02153	619 aa		5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	SPDYE7P	Q495Y7	208 aa		5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	GADL1	Q6ZQY3	521 aa		5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	MRGPRG	Q86SM5	289 aa		5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	FITM2	Q8N6M3	262 aa		5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	PRRX2	Q99811	253 aa		5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	ADAM2	Q99965	735 aa		5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	RNPEP	Q9H4A4	650 aa		5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	SERHL2	Q9H4I8	314 aa		5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	CYP4F11	Q9HBI6	524 aa		5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	FAM30A	Q9NZY2	134 aa		5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	LUC7L2	Q9Y383	392 aa	Known RBP	5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	PCDHB1	Q9Y5F3	818 aa		5.54	□□□□□ -1.52
PHC3-212	ENST00000490723	WDR33	Q9C0J8	1336 aa	Known RBP	5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	FOXN1	O15353	648 aa		5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	CFI	P05156	583 aa		5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	CKB	P12277	381 aa		5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	NOMO3	P69849	1222 aa		5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	IGBP1	P78318	339 aa		5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	OCA2	Q04671	838 aa		5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	TP53BP2	Q13625	1128 aa		5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	NOMO2	Q5JPE7	1267 aa		5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	DACT2	Q5SW24	774 aa		5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	FOXR2	Q6PJQ5	311 aa		5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	ARHGEF19	Q8IW93	802 aa		5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	TMEM132C	Q8N3T6	1108 aa		5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	RNF31	Q96EP0	1072 aa		5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	MARS2	Q96GW9	593 aa	Known RBP	5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	CEP89	Q96ST8	783 aa		5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	ALOXE3	Q9BYJ1	711 aa		5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	AASDHPPT	Q9NRN7	309 aa		5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	RNF181	Q9P0P0	153 aa		5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	DKK2	Q9UBU2	259 aa		5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	NOX1	Q9Y5S8	564 aa		5.53	□□□□□ -1.52
PHC3-212	ENST00000490723	ERN1	O75460	977 aa	Known RBP	5.52	□□□□□ -1.53
PHC3-212	ENST00000490723	CDKL5	O76039	1030 aa		5.52	□□□□□ -1.53
PHC3-212	ENST00000490723	SPDEF	O95238	335 aa		5.52	□□□□□ -1.53
PHC3-212	ENST00000490723	IL33	O95760	270 aa		5.52	□□□□□ -1.53
PHC3-212	ENST00000490723	GPANK1	O95872	356 aa		5.52	□□□□□ -1.53
PHC3-212	ENST00000490723	RPLP2	P05387	115 aa	Known RBP	5.52	□□□□□ -1.53
PHC3-212	ENST00000490723	CD1A	P06126	327 aa		5.52	□□□□□ -1.53
PHC3-212	ENST00000490723	MTHFD1	P11586	935 aa	Known RBP	5.52	□□□□□ -1.53
PHC3-212	ENST00000490723	SLC6A4	P31645	630 aa		5.52	□□□□□ -1.53
PHC3-212	ENST00000490723	ZEB1	P37275	1124 aa	Predicted RBP	5.52	□□□□□ -1.53
PHC3-212	ENST00000490723	EXOSC10	Q01780	885 aa	Known RBP	5.52	□□□□□ -1.53
PHC3-212	ENST00000490723	RAB39A	Q14964	217 aa		5.52	□□□□□ -1.53
PHC3-212	ENST00000490723	PABPC1L	Q4VXU2	614 aa	Known RBP	5.52	□□□□□ -1.53
PHC3-212	ENST00000490723	B3GNTL1	Q67FW5	361 aa	Predicted RBP	5.52	□□□□□ -1.53
PHC3-212	ENST00000490723	CMTR2	Q8IYT2	770 aa	Known RBP	5.52	□□□□□ -1.53
PHC3-212	ENST00000490723	LCORL	Q8N3X6	602 aa		5.52	□□□□□ -1.53
PHC3-212	ENST00000490723	CHMP4C	Q96CF2	233 aa		5.52	□□□□□ -1.53
PHC3-212	ENST00000490723	MRGPRX4	Q96LA9	322 aa		5.52	□□□□□ -1.53
PHC3-212	ENST00000490723	VRK1	Q99986	396 aa	Predicted RBP	5.52	□□□□□ -1.53
PHC3-212	ENST00000490723	MTO1	Q9Y2Z2	717 aa	Known RBP	5.52	□□□□□ -1.53
PHC3-212	ENST00000490723	SHROOM4	Q9ULL8	1493 aa		5.51	□□□□□ -1.53
PHC3-212	ENST00000490723	MARCH11	A6NNE9	402 aa		5.51	□□□□□ -1.53
PHC3-212	ENST00000490723	B3GALT2	O43825	422 aa		5.51	□□□□□ -1.53
PHC3-212	ENST00000490723	HAUS5	O94927	633 aa		5.51	□□□□□ -1.53
PHC3-212	ENST00000490723	AGFG2	O95081	481 aa		5.51	□□□□□ -1.53
PHC3-212	ENST00000490723	NEK2	P51955	445 aa		5.51	□□□□□ -1.53
PHC3-212	ENST00000490723	TLE1	Q04724	770 aa		5.51	□□□□□ -1.53
PHC3-212	ENST00000490723	KHDC1	Q4VXA5	237 aa	Known RBP	5.51	□□□□□ -1.53
PHC3-212	ENST00000490723	UTP14C	Q5TAP6	766 aa	Known RBP	5.51	□□□□□ -1.53
PHC3-212	ENST00000490723	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	5.51	□□□□□ -1.53
PHC3-212	ENST00000490723	TTC7B	Q86TV6	843 aa		5.51	□□□□□ -1.53
PHC3-212	ENST00000490723	BEND2	Q8NDZ0	799 aa		5.51	□□□□□ -1.53
PHC3-212	ENST00000490723	NUP133	Q8WUM0	1156 aa		5.51	□□□□□ -1.53
PHC3-212	ENST00000490723	ASB10	Q8WXI3	467 aa		5.51	□□□□□ -1.53
PHC3-212	ENST00000490723	DMRTA2	Q96SC8	542 aa		5.51	□□□□□ -1.53
PHC3-212	ENST00000490723	PACSIN1	Q9BY11	444 aa		5.51	□□□□□ -1.53
PHC3-212	ENST00000490723	DMRT1	Q9Y5R6	373 aa		5.51	□□□□□ -1.53
PHC3-212	ENST00000490723	CFAP20	Q9Y6A4	193 aa	Known RBP	5.51	□□□□□ -1.53
PHC3-212	ENST00000490723	COL4A3	Q01955	1670 aa		5.5	□□□□□ -1.53
PHC3-212	ENST00000490723	GRID2IP	A4D2P6	1211 aa		5.5	□□□□□ -1.53
PHC3-212	ENST00000490723	LRRC14B	A6NHZ5	514 aa		5.5	□□□□□ -1.53
PHC3-212	ENST00000490723	FOS	P01100	380 aa	Predicted RBP	5.5	□□□□□ -1.53
PHC3-212	ENST00000490723	GC	P02774	474 aa		5.5	□□□□□ -1.53
PHC3-212	ENST00000490723	ITGAM	P11215	1152 aa		5.5	□□□□□ -1.53
PHC3-212	ENST00000490723	PDC	P20941	246 aa		5.5	□□□□□ -1.53
PHC3-212	ENST00000490723	USP14	P54578	494 aa		5.5	□□□□□ -1.53
PHC3-212	ENST00000490723	CXADR	P78310	365 aa		5.5	□□□□□ -1.53
PHC3-212	ENST00000490723	DSC2	Q02487	901 aa		5.5	□□□□□ -1.53
PHC3-212	ENST00000490723	CPA6	Q8N4T0	437 aa		5.5	□□□□□ -1.53
PHC3-212	ENST00000490723	NSUN6	Q8TEA1	469 aa	Known RBP	5.5	□□□□□ -1.53
PHC3-212	ENST00000490723	HSPBAP1	Q96EW2	488 aa		5.5	□□□□□ -1.53
PHC3-212	ENST00000490723	PNKP	Q96T60	521 aa		5.5	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms