RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 MRE11P49959 708 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 RBP5P82980 135 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 BTG3Q14201 252 aaPredicted RBP11.82□□□□□ -0.52
VARS2-210ENST00000490699 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.82□□□□□ -0.52
VARS2-210ENST00000490699 IRF2BP1Q8IU81 584 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 FBXL13Q8NEE6 735 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 ZSWIM2Q8NEG5 633 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 TET1Q8NFU7 2136 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 DDX27Q96GQ7 796 aaKnown RBP11.82□□□□□ -0.52
VARS2-210ENST00000490699 BORCS6Q96GS4 357 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 ZFP42Q96MM3 310 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 MTMR12Q9C0I1 747 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 GRPEL1Q9HAV7 217 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 AAASQ9NRG9 546 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 DPP3Q9NY33 737 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 INSL6Q9Y581 213 aa11.82□□□□□ -0.52
VARS2-210ENST00000490699 TTC3P53804 2025 aa11.81□□□□□ -0.52
VARS2-210ENST00000490699 LRRC10BA6NIK2 292 aa11.81□□□□□ -0.52
VARS2-210ENST00000490699 H0YGN5 161 aa11.81□□□□□ -0.52
VARS2-210ENST00000490699 INPPL1O15357 1258 aa11.81□□□□□ -0.52
VARS2-210ENST00000490699 TLL1O43897 1013 aa11.81□□□□□ -0.52
VARS2-210ENST00000490699 TRIM21P19474 475 aaKnown RBP11.81□□□□□ -0.52
VARS2-210ENST00000490699 RPL9P32969 192 aaKnown RBP11.81□□□□□ -0.52
VARS2-210ENST00000490699 DLG4P78352 724 aa11.81□□□□□ -0.52
VARS2-210ENST00000490699 CLDN10P78369 228 aa11.81□□□□□ -0.52
VARS2-210ENST00000490699 DEFB103AP81534 67 aa11.81□□□□□ -0.52
VARS2-210ENST00000490699 TUSC3Q13454 348 aa11.81□□□□□ -0.52
VARS2-210ENST00000490699 NCOA4Q13772 614 aa11.81□□□□□ -0.52
VARS2-210ENST00000490699 EXOC3L4Q17RC7 722 aa11.81□□□□□ -0.52
VARS2-210ENST00000490699 PAN2Q504Q3 1202 aaKnown RBP11.81□□□□□ -0.52
VARS2-210ENST00000490699 XKR4Q5GH76 650 aa11.81□□□□□ -0.52
VARS2-210ENST00000490699 LMBRD2Q68DH5 695 aaPredicted RBP11.81□□□□□ -0.52
VARS2-210ENST00000490699 FAM117BQ6P1L5 589 aa11.81□□□□□ -0.52
VARS2-210ENST00000490699 SARM1Q6SZW1 724 aa11.81□□□□□ -0.52
VARS2-210ENST00000490699 ALKAL1Q6UXT8 129 aa11.81□□□□□ -0.52
VARS2-210ENST00000490699 TRAPPC11Q7Z392 1133 aa11.81□□□□□ -0.52
VARS2-210ENST00000490699 CMTR2Q8IYT2 770 aaKnown RBP11.81□□□□□ -0.52
VARS2-210ENST00000490699 TAF4BQ92750 862 aa11.81□□□□□ -0.52
VARS2-210ENST00000490699 FAM81BQ96LP2 452 aa11.81□□□□□ -0.52
VARS2-210ENST00000490699 POP1Q99575 1024 aaKnown RBP11.81□□□□□ -0.52
VARS2-210ENST00000490699 IFNKQ9P0W0 207 aa11.81□□□□□ -0.52
VARS2-210ENST00000490699 GCNT4Q9P109 453 aa11.81□□□□□ -0.52
VARS2-210ENST00000490699 NUB1Q9Y5A7 615 aa11.81□□□□□ -0.52
VARS2-210ENST00000490699 TDRD15B5MCY1 1934 aaKnown RBP11.81□□□□□ -0.52
VARS2-210ENST00000490699 A0A1B0GTH6 734 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 PMM2O15305 246 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 DGKIO75912 1065 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 GJB5O95377 273 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 ITGB3P05106 788 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 ATICP31939 592 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 ALDH7A1P49419 539 aaKnown RBP11.8□□□□□ -0.52
VARS2-210ENST00000490699 TCTN1Q2MV58 587 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 SGSM1Q2NKQ1 1148 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 ZNF699Q32M78 642 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 ZACNQ401N2 412 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 SV2CQ496J9 727 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 CLLU1OSQ5K130 101 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 SV2AQ7L0J3 742 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 C16orf59Q7L2K0 433 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 HERC6Q8IVU3 1022 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 DRC7Q8IY82 874 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 EFCAB13Q8IY85 973 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 FIBCD1Q8N539 461 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 NEK11Q8NG66 645 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 IQCDQ96DY2 449 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 PPP1R10Q96QC0 940 aaKnown RBP11.8□□□□□ -0.52
VARS2-210ENST00000490699 RAD9AQ99638 391 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 TMEM175Q9BSA9 504 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 COLEC11Q9BWP8 271 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 TBC1D13Q9NVG8 400 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 RAB20Q9NX57 234 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 RWDD3Q9Y3V2 267 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 DAAM1Q9Y4D1 1078 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 ANK1P16157 1881 aa11.8□□□□□ -0.52
VARS2-210ENST00000490699 PDCD11Q14690 1871 aaKnown RBP11.79□□□□□ -0.52
VARS2-210ENST00000490699 MEIS3P2A8K0S8 358 aa11.79□□□□□ -0.52
VARS2-210ENST00000490699 PTGESO14684 152 aa11.79□□□□□ -0.52
VARS2-210ENST00000490699 TRAPPC3O43617 180 aa11.79□□□□□ -0.52
VARS2-210ENST00000490699 ZC3H11AO75152 810 aaKnown RBP eCLIP11.79□□□□□ -0.52
VARS2-210ENST00000490699 ALDH2P05091 517 aa11.79□□□□□ -0.52
VARS2-210ENST00000490699 LAG3P18627 525 aa11.79□□□□□ -0.52
VARS2-210ENST00000490699 RFX1P22670 979 aa11.79□□□□□ -0.52
VARS2-210ENST00000490699 POLR2BP30876 1174 aaKnown RBP11.79□□□□□ -0.52
VARS2-210ENST00000490699 OR1G1P47890 313 aa11.79□□□□□ -0.52
VARS2-210ENST00000490699 EPHB4P54760 987 aa11.79□□□□□ -0.52
VARS2-210ENST00000490699 YWHAEP62258 255 aaKnown RBP11.79□□□□□ -0.52
VARS2-210ENST00000490699 TNNC1P63316 161 aa11.79□□□□□ -0.52
VARS2-210ENST00000490699 PPP3CAQ08209 521 aa11.79□□□□□ -0.52
VARS2-210ENST00000490699 TDRD10Q5VZ19 366 aaKnown RBP11.79□□□□□ -0.52
VARS2-210ENST00000490699 FMNL3Q8IVF7 1028 aa11.79□□□□□ -0.52
VARS2-210ENST00000490699 LRRC52Q8N7C0 313 aa11.79□□□□□ -0.52
VARS2-210ENST00000490699 OR5B17Q8NGF7 314 aa11.79□□□□□ -0.52
VARS2-210ENST00000490699 ZMAT2Q96NC0 199 aaKnown RBP11.79□□□□□ -0.52
VARS2-210ENST00000490699 NT5C1BQ96P26 610 aa11.79□□□□□ -0.52
VARS2-210ENST00000490699 CASD1Q96PB1 797 aa11.79□□□□□ -0.52
VARS2-210ENST00000490699 HSD3B7Q9H2F3 369 aa11.79□□□□□ -0.52
VARS2-210ENST00000490699 RTN4Q9NQC3 1192 aaKnown RBP11.79□□□□□ -0.52
VARS2-210ENST00000490699 STK39Q9UEW8 545 aa11.79□□□□□ -0.52
VARS2-210ENST00000490699 TUBGCP4Q9UGJ1 667 aa11.79□□□□□ -0.52
VARS2-210ENST00000490699 AGAP1Q9UPQ3 857 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms