RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 FDXACB1Q9BRP7 624 aaPredicted RBP3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 ANO3Q9BYT9 981 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 ENKD1Q9H0I2 346 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 NRDE2Q9H7Z3 1164 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 DDX21Q9NR30 783 aaKnown RBP eCLIP3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 USP36Q9P275 1121 aaKnown RBP3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 SAP30BPQ9UHR5 308 aaKnown RBP3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 DMTF1Q9Y222 760 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 NESP48681 1621 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 FRMPD2Q68DX3 1309 aaPredicted RBP3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 SMARCA2P51531 1590 aa3.89□□□□□ -1.79
DEPDC1-204ENST00000489862 ST20-MTHFSA0A0A6YYL1 179 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 hCG_1642624A0A1W2PR95 340 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 GOLGA6L6A8MZA4 724 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 HOXA3O43365 443 aaPredicted RBP3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 TIMM44O43615 452 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 IPO13O94829 963 aaKnown RBP3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 GNAT2P19087 354 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 LSP1P33241 339 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 MAN1A1P33908 653 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 GEMIN4P57678 1058 aaKnown RBP3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 IL2P60568 153 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 ZNF267Q14586 743 aaPredicted RBP3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 TERF2Q15554 542 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 CCDC93Q567U6 631 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 RABL3Q5HYI8 236 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 GPR158Q5T848 1215 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 C1orf228Q6PIY5 440 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 B3GNT9Q6UX72 402 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 HTR3DQ70Z44 454 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 HDGFL2Q7Z4V5 671 aaPredicted RBP3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 SRLQ86TD4 932 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 UNC5BQ8IZJ1 945 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 AHI1Q8N157 1196 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 MSL3Q8N5Y2 521 aaKnown RBP3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 PDILTQ8N807 584 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 ZNF610Q8N9Z0 462 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 OR5M3Q8NGP4 307 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 GPR150Q8NGU9 434 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 EPC1Q9H2F5 836 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 RSAD1Q9HA92 442 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 PRDM11Q9NQV5 511 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 TRPS1Q9UHF7 1281 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 DNM3Q9UQ16 869 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 HMGXB3Q12766 1538 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 BAZ1BQ9UIG0 1483 aaKnown RBP3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 ANO9A1A5B4 782 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 GRXCR1A8MXD5 290 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 PRRT4C9JH25 899 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 BRINP1O60477 761 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 SEC24DO94855 1032 aaPredicted RBP3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 ZRANB2O95218 330 aaKnown RBP eCLIP3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 FKBP9O95302 570 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 CLEC2LP0C7M8 214 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 PTMSP20962 102 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 LSSP48449 732 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 ALDH5A1P51649 535 aaPredicted RBP3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 PHC1P78364 1004 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 TRIM14Q14142 442 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 MINDY4Q4G0A6 757 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 ARHGAP29Q52LW3 1261 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 C16orf54Q6UWD8 224 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 FKBP9P1Q75LS8 142 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 MRGPREQ86SM8 312 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 CXorf67Q86X51 503 aaPredicted RBP3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 LYSMD2Q8IV50 215 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 TEX19Q8NA77 164 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 OR2W6PQ8NHA6 318 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 SLC25A43Q8WUT9 341 aaPredicted RBP3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 POF1BQ8WVV4 589 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 NAP1L5Q96NT1 182 aaPredicted RBP3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 CPPED1Q9BRF8 314 aaPredicted RBP3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 PRDM12Q9H4Q4 367 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 IFT22Q9H7X7 185 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 TCF7L1Q9HCS4 588 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 KLHL11Q9NVR0 708 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 TMPRSS11EQ9UL52 423 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 SORCS3Q9UPU3 1222 aa3.88□□□□□ -1.79
DEPDC1-204ENST00000489862 ABHD14A-ACY1A0A1B0GW23 586 aa3.87□□□□□ -1.79
DEPDC1-204ENST00000489862 CT47B1P0C2W7 299 aaPredicted RBP3.87□□□□□ -1.79
DEPDC1-204ENST00000489862 CPEP16870 476 aa3.87□□□□□ -1.79
DEPDC1-204ENST00000489862 TYRP1P17643 537 aa3.87□□□□□ -1.79
DEPDC1-204ENST00000489862 TNFAIP3P21580 790 aa3.87□□□□□ -1.79
DEPDC1-204ENST00000489862 NR4A1P22736 598 aa3.87□□□□□ -1.79
DEPDC1-204ENST00000489862 PPM1FP49593 454 aaPredicted RBP3.87□□□□□ -1.79
DEPDC1-204ENST00000489862 OCRLQ01968 901 aa3.87□□□□□ -1.79
DEPDC1-204ENST00000489862 MGAT5Q09328 741 aa3.87□□□□□ -1.79
DEPDC1-204ENST00000489862 MYBPC2Q14324 1141 aa3.87□□□□□ -1.79
DEPDC1-204ENST00000489862 ALFQ53S48 1182 aa3.87□□□□□ -1.79
DEPDC1-204ENST00000489862 BROXQ5VW32 411 aa3.87□□□□□ -1.79
DEPDC1-204ENST00000489862 CCDC70Q6NSX1 233 aa3.87□□□□□ -1.79
DEPDC1-204ENST00000489862 TAS1R1Q7RTX1 841 aa3.87□□□□□ -1.79
DEPDC1-204ENST00000489862 ZNF276Q8N554 614 aa3.87□□□□□ -1.79
DEPDC1-204ENST00000489862 NKAPQ8N5F7 415 aaKnown RBP3.87□□□□□ -1.79
DEPDC1-204ENST00000489862 HAS1Q92839 578 aa3.87□□□□□ -1.79
DEPDC1-204ENST00000489862 USP7Q93009 1102 aa3.87□□□□□ -1.79
DEPDC1-204ENST00000489862 CDC5LQ99459 802 aaKnown RBP3.87□□□□□ -1.79
DEPDC1-204ENST00000489862 CPEB1Q9BZB8 566 aaKnown RBP3.87□□□□□ -1.79
DEPDC1-204ENST00000489862 EMC7Q9NPA0 242 aa3.87□□□□□ -1.79
DEPDC1-204ENST00000489862 EVLQ9UI08 416 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms