RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 SYDE1Q6ZW31 735 aaPredicted RBP15.99■□□□□ 0.15
COL9A1-208ENST00000489611 SLC13A5Q86YT5 568 aaPredicted RBP15.99■□□□□ 0.15
COL9A1-208ENST00000489611 MCOLN2Q8IZK6 566 aa15.99■□□□□ 0.15
COL9A1-208ENST00000489611 ASAP3Q8TDY4 903 aa15.99■□□□□ 0.15
COL9A1-208ENST00000489611 C2orf40Q9H1Z8 148 aa15.99■□□□□ 0.15
COL9A1-208ENST00000489611 HOMER3Q9NSC5 361 aa15.99■□□□□ 0.15
COL9A1-208ENST00000489611 MTRF1LQ9UGC7 380 aaKnown RBP15.99■□□□□ 0.15
COL9A1-208ENST00000489611 LRRC37A2A6NM11 1700 aa15.98■□□□□ 0.15
COL9A1-208ENST00000489611 H0YGN5 161 aa15.98■□□□□ 0.15
COL9A1-208ENST00000489611 NR1D1P20393 614 aa15.98■□□□□ 0.15
COL9A1-208ENST00000489611 MAPK4P31152 587 aa15.98■□□□□ 0.15
COL9A1-208ENST00000489611 NLRP11P59045 1033 aaKnown RBP15.98■□□□□ 0.15
COL9A1-208ENST00000489611 ZNF211Q13398 564 aaPredicted RBP15.98■□□□□ 0.15
COL9A1-208ENST00000489611 TDRD10Q5VZ19 366 aaKnown RBP15.98■□□□□ 0.15
COL9A1-208ENST00000489611 CHADLQ6NUI6 762 aa15.98■□□□□ 0.15
COL9A1-208ENST00000489611 CRELD2Q6UXH1 353 aaPredicted RBP15.98■□□□□ 0.15
COL9A1-208ENST00000489611 FASTKD5Q7L8L6 764 aaKnown RBP15.98■□□□□ 0.15
COL9A1-208ENST00000489611 KRT35Q92764 455 aa15.98■□□□□ 0.15
COL9A1-208ENST00000489611 MAGOHBQ96A72 148 aaKnown RBP15.98■□□□□ 0.15
COL9A1-208ENST00000489611 TSPYL1Q9H0U9 437 aa15.98■□□□□ 0.15
COL9A1-208ENST00000489611 NFS1Q9Y697 457 aa15.98■□□□□ 0.15
COL9A1-208ENST00000489611 SCINQ9Y6U3 715 aa15.98■□□□□ 0.15
COL9A1-208ENST00000489611 UNCXA6NJT0 531 aa15.98■□□□□ 0.15
COL9A1-208ENST00000489611 CLDN3O15551 220 aa15.98■□□□□ 0.15
COL9A1-208ENST00000489611 TOM1L1O75674 476 aa15.98■□□□□ 0.15
COL9A1-208ENST00000489611 CDR1P51861 262 aa15.98■□□□□ 0.15
COL9A1-208ENST00000489611 PLPPR4Q7Z2D5 763 aa15.98■□□□□ 0.15
COL9A1-208ENST00000489611 DDX42Q86XP3 938 aaKnown RBP eCLIP15.98■□□□□ 0.15
COL9A1-208ENST00000489611 WDR49Q8IV35 697 aa15.98■□□□□ 0.15
COL9A1-208ENST00000489611 PRELID2Q8N945 189 aa15.98■□□□□ 0.15
COL9A1-208ENST00000489611 PAGR1Q9BTK6 254 aa15.98■□□□□ 0.15
COL9A1-208ENST00000489611 MRPL4Q9BYD3 311 aaKnown RBP15.98■□□□□ 0.15
COL9A1-208ENST00000489611 CELF4Q9BZC1 486 aaKnown RBP15.98■□□□□ 0.15
COL9A1-208ENST00000489611 PLEKHA4Q9H4M7 779 aa15.98■□□□□ 0.15
COL9A1-208ENST00000489611 LRRC19Q9H756 370 aa15.98■□□□□ 0.15
COL9A1-208ENST00000489611 PASKQ96RG2 1323 aa15.97■□□□□ 0.15
COL9A1-208ENST00000489611 SOWAHBA6NEL2 793 aa15.97■□□□□ 0.15
COL9A1-208ENST00000489611 TMEM110-MUSTN1A8MSY1 372 aa15.97■□□□□ 0.15
COL9A1-208ENST00000489611 MYO1FO00160 1098 aa15.97■□□□□ 0.15
COL9A1-208ENST00000489611 FSCN2O14926 492 aa15.97■□□□□ 0.15
COL9A1-208ENST00000489611 DHX9Q08211 1270 aaKnown RBP15.97■□□□□ 0.15
COL9A1-208ENST00000489611 SLMAPQ14BN4 828 aa15.97■□□□□ 0.15
COL9A1-208ENST00000489611 CDCA2Q69YH5 1023 aaPredicted RBP15.97■□□□□ 0.15
COL9A1-208ENST00000489611 CCDC137Q6PK04 289 aaKnown RBP15.97■□□□□ 0.15
COL9A1-208ENST00000489611 HOOK3Q86VS8 718 aa15.97■□□□□ 0.15
COL9A1-208ENST00000489611 NCAPG2Q86XI2 1143 aa15.97■□□□□ 0.15
COL9A1-208ENST00000489611 ZBTB8OSQ8IWT0 167 aa15.97■□□□□ 0.15
COL9A1-208ENST00000489611 UBLCP1Q8WVY7 318 aaPredicted RBP15.97■□□□□ 0.15
COL9A1-208ENST00000489611 MS4A4AQ96JQ5 239 aa15.97■□□□□ 0.15
COL9A1-208ENST00000489611 TXLNGYQ9BZA5 131 aa15.97■□□□□ 0.15
COL9A1-208ENST00000489611 ZDHHC18Q9NUE0 388 aa15.97■□□□□ 0.15
COL9A1-208ENST00000489611 ANAPC7Q9UJX3 599 aa15.97■□□□□ 0.15
COL9A1-208ENST00000489611 LGR5O75473 907 aa15.96■□□□□ 0.15
COL9A1-208ENST00000489611 CLTAP09496 248 aa15.96■□□□□ 0.15
COL9A1-208ENST00000489611 NUDT17P0C025 328 aa15.96■□□□□ 0.15
COL9A1-208ENST00000489611 PYGMP11217 842 aa15.96■□□□□ 0.15
COL9A1-208ENST00000489611 ACO1P21399 889 aaKnown RBP15.96■□□□□ 0.15
COL9A1-208ENST00000489611 TCF7P36402 384 aaPredicted RBP15.96■□□□□ 0.15
COL9A1-208ENST00000489611 PTGIRP43119 386 aa15.96■□□□□ 0.15
COL9A1-208ENST00000489611 ACOT2P49753 483 aa15.96■□□□□ 0.15
COL9A1-208ENST00000489611 GNGT1P63211 74 aa15.96■□□□□ 0.15
COL9A1-208ENST00000489611 C1QBPQ07021 282 aaKnown RBP15.96■□□□□ 0.15
COL9A1-208ENST00000489611 CAPSQ13938 189 aa15.96■□□□□ 0.15
COL9A1-208ENST00000489611 UAP1Q16222 522 aaPredicted RBP15.96■□□□□ 0.15
COL9A1-208ENST00000489611 DNAJC21Q5F1R6 531 aaKnown RBP15.96■□□□□ 0.15
COL9A1-208ENST00000489611 NAA35Q5VZE5 725 aa15.96■□□□□ 0.15
COL9A1-208ENST00000489611 SPATS2Q86XZ4 545 aaKnown RBP15.96■□□□□ 0.15
COL9A1-208ENST00000489611 PHF13Q86YI8 300 aaPredicted RBP15.96■□□□□ 0.15
COL9A1-208ENST00000489611 BRSK2Q8IWQ3 736 aa15.96■□□□□ 0.15
COL9A1-208ENST00000489611 ABRAQ8N0Z2 381 aa15.96■□□□□ 0.15
COL9A1-208ENST00000489611 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.96■□□□□ 0.15
COL9A1-208ENST00000489611 ATP8B4Q8TF62 1192 aa15.96■□□□□ 0.15
COL9A1-208ENST00000489611 FAXDC2Q96IV6 333 aa15.96■□□□□ 0.15
COL9A1-208ENST00000489611 PCYT2Q99447 389 aa15.96■□□□□ 0.15
COL9A1-208ENST00000489611 PI4K2AQ9BTU6 479 aa15.96■□□□□ 0.15
COL9A1-208ENST00000489611 TARS2Q9BW92 718 aaKnown RBP15.96■□□□□ 0.15
COL9A1-208ENST00000489611 NEUROG2Q9H2A3 272 aa15.96■□□□□ 0.15
COL9A1-208ENST00000489611 DPH5Q9H2P9 285 aa15.96■□□□□ 0.15
COL9A1-208ENST00000489611 ERVK-5Q9HDB9 667 aa15.96■□□□□ 0.15
COL9A1-208ENST00000489611 TXNRD2Q9NNW7 524 aa15.96■□□□□ 0.15
COL9A1-208ENST00000489611 NR2E1Q9Y466 385 aa15.96■□□□□ 0.15
COL9A1-208ENST00000489611 CNTNAP2Q9UHC6 1331 aa15.96■□□□□ 0.15
COL9A1-208ENST00000489611 PSTPIP1O43586 416 aa15.96■□□□□ 0.14
COL9A1-208ENST00000489611 CNMDO75829 334 aa15.96■□□□□ 0.14
COL9A1-208ENST00000489611 VNN1O95497 513 aa15.96■□□□□ 0.14
COL9A1-208ENST00000489611 COILP38432 576 aaPredicted RBP15.96■□□□□ 0.14
COL9A1-208ENST00000489611 ZNF844Q08AG5 666 aa15.96■□□□□ 0.14
COL9A1-208ENST00000489611 GRK7Q8WTQ7 553 aa15.96■□□□□ 0.14
COL9A1-208ENST00000489611 PABPC3Q9H361 631 aaKnown RBP15.96■□□□□ 0.14
COL9A1-208ENST00000489611 R3HDMLQ9H3Y0 253 aa15.96■□□□□ 0.14
COL9A1-208ENST00000489611 ACP6Q9NPH0 428 aa15.96■□□□□ 0.14
COL9A1-208ENST00000489611 ANKFY1Q9P2R3 1169 aa15.96■□□□□ 0.14
COL9A1-208ENST00000489611 TELO2Q9Y4R8 837 aa15.96■□□□□ 0.14
COL9A1-208ENST00000489611 ATMINO43313 823 aaPredicted RBP15.95■□□□□ 0.14
COL9A1-208ENST00000489611 LSM8O95777 96 aaKnown RBP15.95■□□□□ 0.14
COL9A1-208ENST00000489611 CYP2C8P10632 490 aa15.95■□□□□ 0.14
COL9A1-208ENST00000489611 OSBPP22059 807 aa15.95■□□□□ 0.14
COL9A1-208ENST00000489611 GNA15P30679 374 aa15.95■□□□□ 0.14
COL9A1-208ENST00000489611 CETN2P41208 172 aa15.95■□□□□ 0.14
COL9A1-208ENST00000489611 NOP14P78316 857 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms