RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 IMPG2Q9BZV3 1241 aa22.49■■□□□ 1.19
SND1-214ENST00000489417 ATP11BQ9Y2G3 1177 aa22.49■■□□□ 1.19
SND1-214ENST00000489417 SOWAHDA6NJG2 315 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 F8VZ95 297 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 CST3P01034 146 aaPredicted RBP22.48■■□□□ 1.19
SND1-214ENST00000489417 MSNP26038 577 aaKnown RBP22.48■■□□□ 1.19
SND1-214ENST00000489417 KCNJ6P48051 423 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 MRPL10Q7Z7H8 261 aaKnown RBP22.48■■□□□ 1.19
SND1-214ENST00000489417 GPIHBP1Q8IV16 184 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 KIAA1524Q8TCG1 905 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 KAT5Q92993 513 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 ZMAT2Q96NC0 199 aaKnown RBP22.48■■□□□ 1.19
SND1-214ENST00000489417 CXCL16Q9H2A7 254 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 HIPK3Q9H422 1215 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 KLK14Q9P0G3 267 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 SIX4Q9UIU6 781 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 UMODL1Q5DID0 1318 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 CITO14578 2027 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 ESPNB1AK53 854 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 ZNF623O75123 536 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 ASS1P00966 412 aaKnown RBP22.48■■□□□ 1.19
SND1-214ENST00000489417 SKIP12755 728 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 KCNE1P15382 129 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 SOX5P35711 763 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 MYL6P60660 151 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 NOP14P78316 857 aaKnown RBP22.48■■□□□ 1.19
SND1-214ENST00000489417 GCNT1Q02742 428 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 SGSM1Q2NKQ1 1148 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 SCARA3Q6AZY7 606 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 SPOPLQ6IQ16 392 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 RAD9BQ6WBX8 426 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 ENOSF1Q7L5Y1 443 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 NECAB2Q7Z6G3 386 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 FMNL3Q8IVF7 1028 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 ELMO3Q96BJ8 720 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 KREMEN1Q96MU8 473 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 GPR88Q9GZN0 384 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 APOBEC3GQ9HC16 384 aaKnown RBP22.48■■□□□ 1.19
SND1-214ENST00000489417 DPP3Q9NY33 737 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 ITGA11Q9UKX5 1188 aa22.48■■□□□ 1.19
SND1-214ENST00000489417 A0A0U1RQF3 1178 aa22.47■■□□□ 1.19
SND1-214ENST00000489417 NBNO60934 754 aa22.47■■□□□ 1.19
SND1-214ENST00000489417 CLSTN1O94985 981 aa22.47■■□□□ 1.19
SND1-214ENST00000489417 ITGB3P05106 788 aa22.47■■□□□ 1.19
SND1-214ENST00000489417 SERPING1P05155 500 aa22.47■■□□□ 1.19
SND1-214ENST00000489417 KRT19P08727 400 aa22.47■■□□□ 1.19
SND1-214ENST00000489417 FERP16591 822 aa22.47■■□□□ 1.19
SND1-214ENST00000489417 ZBTB6Q15916 424 aa22.47■■□□□ 1.19
SND1-214ENST00000489417 BEST2Q8NFU1 509 aa22.47■■□□□ 1.19
SND1-214ENST00000489417 ARHGAP20Q9P2F6 1191 aa22.47■■□□□ 1.19
SND1-214ENST00000489417 UBQLN1Q9UMX0 589 aaKnown RBP22.47■■□□□ 1.19
SND1-214ENST00000489417 SMIM28A0A1B0GU29 152 aa22.46■■□□□ 1.19
SND1-214ENST00000489417 PNMA6AP0CW24 399 aaPredicted RBP22.46■■□□□ 1.19
SND1-214ENST00000489417 GUCY2FP51841 1108 aa22.46■■□□□ 1.19
SND1-214ENST00000489417 ARID5AQ03989 594 aa22.46■■□□□ 1.19
SND1-214ENST00000489417 MTF1Q14872 753 aa22.46■■□□□ 1.19
SND1-214ENST00000489417 GPNMBQ14956 572 aa22.46■■□□□ 1.19
SND1-214ENST00000489417 GLRA4Q5JXX5 417 aa22.46■■□□□ 1.19
SND1-214ENST00000489417 HGSNATQ68CP4 663 aa22.46■■□□□ 1.19
SND1-214ENST00000489417 CXorf38Q8TB03 319 aa22.46■■□□□ 1.19
SND1-214ENST00000489417 TAF4BQ92750 862 aa22.46■■□□□ 1.19
SND1-214ENST00000489417 FTHL17Q9BXU8 183 aa22.46■■□□□ 1.19
SND1-214ENST00000489417 RGS18Q9NS28 235 aa22.46■■□□□ 1.19
SND1-214ENST00000489417 TBX21Q9UL17 535 aa22.46■■□□□ 1.19
SND1-214ENST00000489417 GIT1Q9Y2X7 761 aa22.46■■□□□ 1.19
SND1-214ENST00000489417 NUB1Q9Y5A7 615 aa22.46■■□□□ 1.19
SND1-214ENST00000489417 FOXN3O00409 490 aaPredicted RBP22.45■■□□□ 1.18
SND1-214ENST00000489417 XPOTO43592 962 aaKnown RBP22.45■■□□□ 1.18
SND1-214ENST00000489417 GFPT2O94808 682 aa22.45■■□□□ 1.18
SND1-214ENST00000489417 PARNO95453 639 aaKnown RBP22.45■■□□□ 1.18
SND1-214ENST00000489417 POLR2BP30876 1174 aaKnown RBP22.45■■□□□ 1.18
SND1-214ENST00000489417 RBP5P82980 135 aa22.45■■□□□ 1.18
SND1-214ENST00000489417 KLHL30Q0D2K2 578 aa22.45■■□□□ 1.18
SND1-214ENST00000489417 LRRC26Q2I0M4 334 aa22.45■■□□□ 1.18
SND1-214ENST00000489417 ZNF699Q32M78 642 aa22.45■■□□□ 1.18
SND1-214ENST00000489417 FAM43BQ6ZT52 329 aaPredicted RBP22.45■■□□□ 1.18
SND1-214ENST00000489417 IRF2BP2Q7Z5L9 587 aa22.45■■□□□ 1.18
SND1-214ENST00000489417 TMEM130Q8N3G9 435 aa22.45■■□□□ 1.18
SND1-214ENST00000489417 LINC01599Q8WXQ3 324 aa22.45■■□□□ 1.18
SND1-214ENST00000489417 SHC3Q92529 594 aa22.45■■□□□ 1.18
SND1-214ENST00000489417 LPPQ93052 612 aa22.45■■□□□ 1.18
SND1-214ENST00000489417 PGBD4Q96DM1 585 aa22.45■■□□□ 1.18
SND1-214ENST00000489417 PPP1R12CQ9BZL4 782 aa22.45■■□□□ 1.18
SND1-214ENST00000489417 XYLT2Q9H1B5 865 aa22.45■■□□□ 1.18
SND1-214ENST00000489417 NHEJ1Q9H9Q4 299 aaPredicted RBP22.45■■□□□ 1.18
SND1-214ENST00000489417 TUBGCP4Q9UGJ1 667 aa22.45■■□□□ 1.18
SND1-214ENST00000489417 R3HCC1Q9Y3T6 440 aaKnown RBP22.45■■□□□ 1.18
SND1-214ENST00000489417 TANC1Q9C0D5 1861 aa22.44■■□□□ 1.18
SND1-214ENST00000489417 MEIS3P2A8K0S8 358 aa22.44■■□□□ 1.18
SND1-214ENST00000489417 PLEKP08567 350 aaPredicted RBP22.44■■□□□ 1.18
SND1-214ENST00000489417 ATF7P17544 494 aaPredicted RBP22.44■■□□□ 1.18
SND1-214ENST00000489417 TBXAS1P24557 533 aaPredicted RBP22.44■■□□□ 1.18
SND1-214ENST00000489417 ATICP31939 592 aa22.44■■□□□ 1.18
SND1-214ENST00000489417 EIF4A3P38919 411 aaKnown RBP22.44■■□□□ 1.18
SND1-214ENST00000489417 PRKCIP41743 596 aa22.44■■□□□ 1.18
SND1-214ENST00000489417 CUL2Q13617 745 aa22.44■■□□□ 1.18
SND1-214ENST00000489417 TDRD12Q587J7 1177 aaKnown RBP22.44■■□□□ 1.18
SND1-214ENST00000489417 PLEKHG4Q58EX7 1191 aa22.44■■□□□ 1.18
SND1-214ENST00000489417 AGMOQ6ZNB7 445 aa22.44■■□□□ 1.18
SND1-214ENST00000489417 ECHDC2Q86YB7 292 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms