RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 FOXS1O43638 330 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 MFAP3LO75121 409 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 AMHP03971 560 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 ALAS1P13196 640 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 PLP2Q04941 152 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 FOXL1Q12952 345 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 PICALMQ13492 652 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 SEMA5AQ13591 1074 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 METTL24Q5JXM2 366 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 SWSAP1Q6NVH7 229 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 ZNF529Q6P280 563 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 XYLT1Q86Y38 959 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 FAM90A1Q86YD7 464 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 EXOC8Q8IYI6 725 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 D2HGDHQ8N465 521 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 MDGA1Q8NFP4 955 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 ZFP28Q8NHY6 868 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 BRIX1Q8TDN6 353 aaKnown RBP6.22□□□□□ -1.41
CCL20-204ENST00000489160 LRTOMTQ8WZ04 291 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 TFAP2CQ92754 450 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 NDC1Q9BTX1 674 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 BDH2Q9BUT1 245 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 ZNF700Q9H0M5 742 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 BHMT2Q9H2M3 363 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 SARS2Q9NP81 518 aaKnown RBP6.22□□□□□ -1.41
CCL20-204ENST00000489160 CNNM1Q9NRU3 951 aa6.22□□□□□ -1.41
CCL20-204ENST00000489160 A0A1W2PPL8 197 aa6.21□□□□□ -1.42
CCL20-204ENST00000489160 TCRBV7S2A1N4TA0A589 114 aa6.21□□□□□ -1.42
CCL20-204ENST00000489160 KIAA0391O15091 583 aaKnown RBP6.21□□□□□ -1.42
CCL20-204ENST00000489160 PHGDHO43175 533 aaKnown RBP6.21□□□□□ -1.42
CCL20-204ENST00000489160 FRS3O43559 492 aa6.21□□□□□ -1.42
CCL20-204ENST00000489160 MGEA5O60502 916 aa6.21□□□□□ -1.42
CCL20-204ENST00000489160 POMCP01189 267 aa6.21□□□□□ -1.42
CCL20-204ENST00000489160 PEX2P28328 305 aa6.21□□□□□ -1.42
CCL20-204ENST00000489160 PIK3CGP48736 1102 aa6.21□□□□□ -1.42
CCL20-204ENST00000489160 RAP2BP61225 183 aa6.21□□□□□ -1.42
CCL20-204ENST00000489160 HHEXQ03014 270 aa6.21□□□□□ -1.42
CCL20-204ENST00000489160 ATXN7L2Q5T6C5 722 aaPredicted RBP6.21□□□□□ -1.42
CCL20-204ENST00000489160 EFCAB12Q6NXP0 572 aa6.21□□□□□ -1.42
CCL20-204ENST00000489160 DRICH1Q6PGQ1 229 aaPredicted RBP6.21□□□□□ -1.42
CCL20-204ENST00000489160 LIMS2Q7Z4I7 341 aa6.21□□□□□ -1.42
CCL20-204ENST00000489160 ELOA2Q8IYF1 753 aaPredicted RBP6.21□□□□□ -1.42
CCL20-204ENST00000489160 ANKRD35Q8N283 1001 aa6.21□□□□□ -1.42
CCL20-204ENST00000489160 SVIPQ8NHG7 77 aa6.21□□□□□ -1.42
CCL20-204ENST00000489160 NT5C1BQ96P26 610 aa6.21□□□□□ -1.42
CCL20-204ENST00000489160 RBM15Q96T37 977 aaKnown RBP eCLIP6.21□□□□□ -1.42
CCL20-204ENST00000489160 PACSIN1Q9BY11 444 aa6.21□□□□□ -1.42
CCL20-204ENST00000489160 MRPL46Q9H2W6 279 aaKnown RBP6.21□□□□□ -1.42
CCL20-204ENST00000489160 ZMAT3Q9HA38 289 aaKnown RBP6.21□□□□□ -1.42
CCL20-204ENST00000489160 STAP2Q9UGK3 403 aa6.21□□□□□ -1.42
CCL20-204ENST00000489160 PCDHA1Q9Y5I3 950 aa6.21□□□□□ -1.42
CCL20-204ENST00000489160 PNPLA7Q6ZV29 1317 aa6.21□□□□□ -1.42
CCL20-204ENST00000489160 PMM2O15305 246 aa6.2□□□□□ -1.42
CCL20-204ENST00000489160 SLC43A1O75387 559 aa6.2□□□□□ -1.42
CCL20-204ENST00000489160 GNAI3P08754 354 aa6.2□□□□□ -1.42
CCL20-204ENST00000489160 SBK3P0C264 359 aa6.2□□□□□ -1.42
CCL20-204ENST00000489160 MGAT1P26572 445 aa6.2□□□□□ -1.42
CCL20-204ENST00000489160 GNAI1P63096 354 aa6.2□□□□□ -1.42
CCL20-204ENST00000489160 UBXN2BQ14CS0 331 aa6.2□□□□□ -1.42
CCL20-204ENST00000489160 POLD3Q15054 466 aaPredicted RBP6.2□□□□□ -1.42
CCL20-204ENST00000489160 KHDC1LQ5JSQ8 128 aa6.2□□□□□ -1.42
CCL20-204ENST00000489160 UBE3BQ7Z3V4 1068 aa6.2□□□□□ -1.42
CCL20-204ENST00000489160 PPP1R3BQ86XI6 285 aa6.2□□□□□ -1.42
CCL20-204ENST00000489160 OR52N2Q8NGI0 321 aa6.2□□□□□ -1.42
CCL20-204ENST00000489160 MIEF2Q96C03 454 aa6.2□□□□□ -1.42
CCL20-204ENST00000489160 SSBP3Q9BWW4 388 aaPredicted RBP6.2□□□□□ -1.42
CCL20-204ENST00000489160 CPEB1Q9BZB8 566 aaKnown RBP6.2□□□□□ -1.42
CCL20-204ENST00000489160 C22orf23Q9BZE7 217 aa6.2□□□□□ -1.42
CCL20-204ENST00000489160 ATP6V0A4Q9HBG4 840 aa6.2□□□□□ -1.42
CCL20-204ENST00000489160 SPON1Q9HCB6 807 aa6.2□□□□□ -1.42
CCL20-204ENST00000489160 JKAMPQ9P055 326 aa6.2□□□□□ -1.42
CCL20-204ENST00000489160 CPA4Q9UI42 421 aa6.2□□□□□ -1.42
CCL20-204ENST00000489160 ZDHHC8Q9ULC8 765 aa6.2□□□□□ -1.42
CCL20-204ENST00000489160 TPCN1Q9ULQ1 816 aa6.2□□□□□ -1.42
CCL20-204ENST00000489160 PATE3B3GLJ2 98 aa6.19□□□□□ -1.42
CCL20-204ENST00000489160 HAUS5O94927 633 aa6.19□□□□□ -1.42
CCL20-204ENST00000489160 COMTP21964 271 aa6.19□□□□□ -1.42
CCL20-204ENST00000489160 CCDC93Q567U6 631 aa6.19□□□□□ -1.42
CCL20-204ENST00000489160 DCAF17Q5H9S7 520 aaPredicted RBP6.19□□□□□ -1.42
CCL20-204ENST00000489160 SYCP2LQ5T4T6 812 aa6.19□□□□□ -1.42
CCL20-204ENST00000489160 EMC10Q5UCC4 262 aa6.19□□□□□ -1.42
CCL20-204ENST00000489160 APOA5Q6Q788 366 aa6.19□□□□□ -1.42
CCL20-204ENST00000489160 COL23A1Q86Y22 540 aaPredicted RBP6.19□□□□□ -1.42
CCL20-204ENST00000489160 KRT78Q8N1N4 520 aa6.19□□□□□ -1.42
CCL20-204ENST00000489160 AOPEPQ8N6M6 819 aa6.19□□□□□ -1.42
CCL20-204ENST00000489160 TNPO1Q92973 898 aaKnown RBP6.19□□□□□ -1.42
CCL20-204ENST00000489160 C1orf43Q9BWL3 253 aa6.19□□□□□ -1.42
CCL20-204ENST00000489160 KRTAP4-2Q9BYR5 136 aa6.19□□□□□ -1.42
CCL20-204ENST00000489160 NUP62CLQ9H1M0 184 aa6.19□□□□□ -1.42
CCL20-204ENST00000489160 CHST12Q9NRB3 414 aa6.19□□□□□ -1.42
CCL20-204ENST00000489160 RLIMQ9NVW2 624 aa6.19□□□□□ -1.42
CCL20-204ENST00000489160 PIH1D1Q9NWS0 290 aaKnown RBP6.19□□□□□ -1.42
CCL20-204ENST00000489160 CFAP97Q9P2B7 532 aa6.19□□□□□ -1.42
CCL20-204ENST00000489160 PCDHA6Q9UN73 950 aa6.19□□□□□ -1.42
CCL20-204ENST00000489160 PCDHGB6Q9Y5F9 930 aa6.19□□□□□ -1.42
CCL20-204ENST00000489160 K7ESM1 405 aa6.18□□□□□ -1.42
CCL20-204ENST00000489160 PQBP1O60828 265 aaKnown RBP6.18□□□□□ -1.42
CCL20-204ENST00000489160 MYF5P13349 255 aa6.18□□□□□ -1.42
CCL20-204ENST00000489160 SLC6A4P31645 630 aa6.18□□□□□ -1.42
CCL20-204ENST00000489160 RHBDL3P58872 404 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms