RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 HNRNPA1P09651 372 aaKnown RBP eCLIP15.05■□□□□ -0
SPTLC1-207ENST00000488921 CXCL8P10145 99 aa15.05■□□□□ -0
SPTLC1-207ENST00000488921 TKTP29401 623 aaKnown RBP15.05■□□□□ -0
SPTLC1-207ENST00000488921 HOXA9P31269 272 aa15.05■□□□□ -0
SPTLC1-207ENST00000488921 BRCC3P46736 316 aa15.05■□□□□ -0
SPTLC1-207ENST00000488921 NASPP49321 788 aaPredicted RBP15.05■□□□□ -0
SPTLC1-207ENST00000488921 RAB33AQ14088 237 aa15.05■□□□□ -0
SPTLC1-207ENST00000488921 SLC10A6Q3KNW5 377 aa15.05■□□□□ -0
SPTLC1-207ENST00000488921 SEZ6Q53EL9 994 aa15.05■□□□□ -0
SPTLC1-207ENST00000488921 PPM1LQ5SGD2 360 aa15.05■□□□□ -0
SPTLC1-207ENST00000488921 USP49Q70CQ1 688 aa15.05■□□□□ -0
SPTLC1-207ENST00000488921 RTL10Q7L3V2 364 aa15.05■□□□□ -0
SPTLC1-207ENST00000488921 ZNF707Q96C28 371 aaPredicted RBP15.05■□□□□ -0
SPTLC1-207ENST00000488921 ZNF396Q96N95 335 aaPredicted RBP15.05■□□□□ -0
SPTLC1-207ENST00000488921 ST6GALNAC4Q9H4F1 302 aa15.05■□□□□ -0
SPTLC1-207ENST00000488921 LIMD1Q9UGP4 676 aa15.05■□□□□ -0
SPTLC1-207ENST00000488921 BACE2Q9Y5Z0 518 aa15.05■□□□□ -0
SPTLC1-207ENST00000488921 ZNF318Q5VUA4 2279 aa15.05■□□□□ -0
SPTLC1-207ENST00000488921 TTC26A0AVF1 554 aa15.04■□□□□ -0
SPTLC1-207ENST00000488921 H7C4K7 107 aa15.04■□□□□ -0
SPTLC1-207ENST00000488921 XYLBO75191 536 aa15.04■□□□□ -0
SPTLC1-207ENST00000488921 C8AP07357 584 aa15.04■□□□□ -0
SPTLC1-207ENST00000488921 MYBP10242 640 aa15.04■□□□□ -0
SPTLC1-207ENST00000488921 GAP43P17677 238 aa15.04■□□□□ -0
SPTLC1-207ENST00000488921 CYP3A5P20815 502 aa15.04■□□□□ -0
SPTLC1-207ENST00000488921 GBP2P32456 591 aaPredicted RBP15.04■□□□□ -0
SPTLC1-207ENST00000488921 OR1D2P34982 312 aa15.04■□□□□ -0
SPTLC1-207ENST00000488921 STAT6P42226 847 aa15.04■□□□□ -0
SPTLC1-207ENST00000488921 UVSSAQ2YD98 709 aa15.04■□□□□ -0
SPTLC1-207ENST00000488921 DYMQ7RTS9 669 aa15.04■□□□□ -0
SPTLC1-207ENST00000488921 FBXL6Q8N531 539 aa15.04■□□□□ -0
SPTLC1-207ENST00000488921 DDX12PQ92771 950 aa15.04■□□□□ -0
SPTLC1-207ENST00000488921 C18orf25Q96B23 403 aaPredicted RBP15.04■□□□□ -0
SPTLC1-207ENST00000488921 FIZ1Q96SL8 496 aa15.04■□□□□ -0
SPTLC1-207ENST00000488921 MSTO1Q9BUK6 570 aa15.04■□□□□ -0
SPTLC1-207ENST00000488921 HAPLN2Q9GZV7 340 aa15.04■□□□□ -0
SPTLC1-207ENST00000488921 RPF1Q9H9Y2 349 aaKnown RBP15.04■□□□□ -0
SPTLC1-207ENST00000488921 IGSF9Q9P2J2 1179 aa15.04■□□□□ -0
SPTLC1-207ENST00000488921 UBQLN1Q9UMX0 589 aaKnown RBP15.04■□□□□ -0
SPTLC1-207ENST00000488921 CDY1Q9Y6F8 540 aa15.04■□□□□ -0
SPTLC1-207ENST00000488921 TCHHQ07283 1943 aa15.04■□□□□ -0
SPTLC1-207ENST00000488921 I3L4J1 428 aa15.03■□□□□ -0
SPTLC1-207ENST00000488921 PPP6R2O75170 966 aa15.03■□□□□ -0
SPTLC1-207ENST00000488921 ASGR2P07307 311 aa15.03■□□□□ -0
SPTLC1-207ENST00000488921 POU2F2P09086 479 aa15.03■□□□□ -0
SPTLC1-207ENST00000488921 NMT1P30419 496 aaKnown RBP15.03■□□□□ -0
SPTLC1-207ENST00000488921 MCM4P33991 863 aa15.03■□□□□ -0
SPTLC1-207ENST00000488921 VARS2Q5ST30 1063 aaKnown RBP15.03■□□□□ -0
SPTLC1-207ENST00000488921 SLFN12LQ6IEE8 588 aa15.03■□□□□ -0
SPTLC1-207ENST00000488921 CD300LGQ6UXG3 332 aa15.03■□□□□ -0
SPTLC1-207ENST00000488921 SFR1Q86XK3 245 aa15.03■□□□□ -0
SPTLC1-207ENST00000488921 CD302Q8IX05 232 aa15.03■□□□□ -0
SPTLC1-207ENST00000488921 APPL2Q8NEU8 664 aa15.03■□□□□ -0
SPTLC1-207ENST00000488921 FEZF2Q8TBJ5 459 aa15.03■□□□□ -0
SPTLC1-207ENST00000488921 KIF12Q96FN5 646 aa15.03■□□□□ -0
SPTLC1-207ENST00000488921 ASIC4Q96FT7 647 aa15.03■□□□□ -0
SPTLC1-207ENST00000488921 SUSD3Q96L08 255 aa15.03■□□□□ -0
SPTLC1-207ENST00000488921 PRRX2Q99811 253 aa15.03■□□□□ -0
SPTLC1-207ENST00000488921 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.03■□□□□ -0
SPTLC1-207ENST00000488921 TUBGCP4Q9UGJ1 667 aa15.03■□□□□ -0
SPTLC1-207ENST00000488921 TSC2P49815 1807 aa15.02■□□□□ -0
SPTLC1-207ENST00000488921 A0A0B4J269 797 aa15.02■□□□□ -0
SPTLC1-207ENST00000488921 SPTLC2O15270 562 aa15.02■□□□□ -0
SPTLC1-207ENST00000488921 MEFVO15553 781 aaPredicted RBP15.02■□□□□ -0
SPTLC1-207ENST00000488921 ADAM12O43184 909 aa15.02■□□□□ -0
SPTLC1-207ENST00000488921 FAM189A1O60320 539 aa15.02■□□□□ -0
SPTLC1-207ENST00000488921 YEATS4O95619 227 aa15.02■□□□□ -0
SPTLC1-207ENST00000488921 LRPAP1P30533 357 aa15.02■□□□□ -0
SPTLC1-207ENST00000488921 TNFSF9P41273 254 aa15.02■□□□□ -0
SPTLC1-207ENST00000488921 TDGQ13569 410 aa15.02■□□□□ -0
SPTLC1-207ENST00000488921 ALCAMQ13740 583 aa15.02■□□□□ -0
SPTLC1-207ENST00000488921 ENOX2Q16206 610 aaKnown RBP15.02■□□□□ -0
SPTLC1-207ENST00000488921 AXDND1Q5T1B0 1012 aaPredicted RBP15.02■□□□□ -0
SPTLC1-207ENST00000488921 SLC8B1Q6J4K2 584 aa15.02■□□□□ -0
SPTLC1-207ENST00000488921 ZNF280DQ6N043 979 aa15.02■□□□□ -0
SPTLC1-207ENST00000488921 GET4Q7L5D6 327 aaPredicted RBP15.02■□□□□ -0
SPTLC1-207ENST00000488921 LINC00301Q8NCQ3 95 aa15.02■□□□□ -0
SPTLC1-207ENST00000488921 SLC7A14Q8TBB6 771 aa15.02■□□□□ -0
SPTLC1-207ENST00000488921 NXPE3Q969Y0 559 aa15.02■□□□□ -0
SPTLC1-207ENST00000488921 MRPL44Q9H9J2 332 aaKnown RBP15.02■□□□□ -0
SPTLC1-207ENST00000488921 EPS15L1Q9UBC2 864 aa15.02■□□□□ -0
SPTLC1-207ENST00000488921 EXOC7Q9UPT5 735 aa15.02■□□□□ -0
SPTLC1-207ENST00000488921 ZFP37Q9Y6Q3 630 aaPredicted RBP15.02■□□□□ -0
SPTLC1-207ENST00000488921 MYMKA6NI61 221 aa15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 LACTBL1A8MY62 500 aa15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 ADRB2P07550 413 aa15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 PAX3P23760 479 aa15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 IGFBP6P24592 240 aaPredicted RBP15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 ELF1P32519 619 aa15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 POU5F1Q01860 360 aaKnown RBP15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 ROR1Q01973 937 aa15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 ZC2HC1CQ53FD0 456 aaPredicted RBP15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 ADALQ6DHV7 355 aa15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 SLC39A4Q6P5W5 647 aa15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 ZNF720Q7Z2F6 126 aa15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 BEST2Q8NFU1 509 aa15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 DNAJC19Q96DA6 116 aa15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 OXCT2Q9BYC2 517 aaPredicted RBP15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 LRRC27Q9C0I9 530 aa15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 CUEDC2Q9H467 287 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms