RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 LRRC55Q6ZSA7 311 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 TOGARAM2Q6ZUX3 1019 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 CBWD2Q8IUF1 395 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 SLC9A9Q8IVB4 645 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 XXYLT1Q8NBI6 393 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 SP7Q8TDD2 431 aaPredicted RBP20.95■□□□□ 0.94
CCM2-216ENST00000488727 DUSP9Q99956 384 aaKnown RBP20.95■□□□□ 0.94
CCM2-216ENST00000488727 VPS16Q9H269 839 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 TOPORSQ9NS56 1045 aaPredicted RBP20.95■□□□□ 0.94
CCM2-216ENST00000488727 PCDHA11Q9Y5I1 949 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 TTC26A0AVF1 554 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 ARHGEF15O94989 841 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 POMCP01189 267 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 NR2F2P24468 414 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 CASP14P31944 242 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 WNT7BP56706 349 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 XKR4Q5GH76 650 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 CMTR2Q8IYT2 770 aaKnown RBP20.95■□□□□ 0.94
CCM2-216ENST00000488727 EEF2KMTQ96G04 330 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 RPF1Q9H9Y2 349 aaKnown RBP20.95■□□□□ 0.94
CCM2-216ENST00000488727 TBC1D13Q9NVG8 400 aa20.95■□□□□ 0.94
CCM2-216ENST00000488727 ADRB2P07550 413 aa20.94■□□□□ 0.94
CCM2-216ENST00000488727 CASP4P49662 377 aa20.94■□□□□ 0.94
CCM2-216ENST00000488727 FXR1P51114 621 aaKnown RBP eCLIP20.94■□□□□ 0.94
CCM2-216ENST00000488727 LRRC63Q05C16 580 aa20.94■□□□□ 0.94
CCM2-216ENST00000488727 BTG3Q14201 252 aaPredicted RBP20.94■□□□□ 0.94
CCM2-216ENST00000488727 SNRNP35Q16560 246 aaKnown RBP20.94■□□□□ 0.94
CCM2-216ENST00000488727 GLRA4Q5JXX5 417 aa20.94■□□□□ 0.94
CCM2-216ENST00000488727 FAM114A1Q8IWE2 563 aa20.94■□□□□ 0.94
CCM2-216ENST00000488727 RDH13Q8NBN7 331 aa20.94■□□□□ 0.94
CCM2-216ENST00000488727 ZMAT2Q96NC0 199 aaKnown RBP20.94■□□□□ 0.94
CCM2-216ENST00000488727 CNTN3Q9P232 1028 aa20.94■□□□□ 0.94
CCM2-216ENST00000488727 MAGEC2Q9UBF1 373 aaPredicted RBP20.94■□□□□ 0.94
CCM2-216ENST00000488727 CHD9Q3L8U1 2897 aa20.94■□□□□ 0.94
CCM2-216ENST00000488727 NLRC5Q86WI3 1866 aa20.94■□□□□ 0.94
CCM2-216ENST00000488727 B4GALT3O60512 393 aa20.93■□□□□ 0.94
CCM2-216ENST00000488727 EXOC3O60645 756 aa20.93■□□□□ 0.94
CCM2-216ENST00000488727 CA3P07451 260 aa20.93■□□□□ 0.94
CCM2-216ENST00000488727 CCDC175P0C221 793 aa20.93■□□□□ 0.94
CCM2-216ENST00000488727 SMAD3P84022 425 aaKnown RBP20.93■□□□□ 0.94
CCM2-216ENST00000488727 MYBPC2Q14324 1141 aa20.93■□□□□ 0.94
CCM2-216ENST00000488727 BRSK2Q8IWQ3 736 aa20.93■□□□□ 0.94
CCM2-216ENST00000488727 RPS6KC1Q96S38 1066 aa20.93■□□□□ 0.94
CCM2-216ENST00000488727 TSG101Q99816 390 aa20.93■□□□□ 0.94
CCM2-216ENST00000488727 SRRTQ9BXP5 876 aaKnown RBP20.93■□□□□ 0.94
CCM2-216ENST00000488727 DNAI1Q9UI46 699 aa20.93■□□□□ 0.94
CCM2-216ENST00000488727 SMIM28A0A1B0GU29 152 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 LACTBL1A8MY62 500 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 LINC00271P0C7V0 271 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 PPP2R3AQ06190 1150 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 ADAM9Q13443 819 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 FOXR2Q6PJQ5 311 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 RAD9BQ6WBX8 426 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 ZNF280BQ86YH2 543 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 TMTC1Q8IUR5 882 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 ZC3H3Q8IXZ2 948 aaKnown RBP20.92■□□□□ 0.94
CCM2-216ENST00000488727 LRRC43Q8N309 656 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 URGCPQ8TCY9 931 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 FAM212AQ96EL1 285 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 MRPL9Q9BYD2 267 aaKnown RBP20.92■□□□□ 0.94
CCM2-216ENST00000488727 PLEKHA5Q9HAU0 1116 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 ABHD10Q9NUJ1 306 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 RBAKQ9NYW8 714 aaPredicted RBP20.92■□□□□ 0.94
CCM2-216ENST00000488727 MRPL42Q9Y6G3 142 aaKnown RBP20.92■□□□□ 0.94
CCM2-216ENST00000488727 SOWAHDA6NJG2 315 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 ZNF233A6NK53 670 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 AKAP3O75969 853 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 DNAJB2P25686 324 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 POU5F1Q01860 360 aaKnown RBP20.92■□□□□ 0.94
CCM2-216ENST00000488727 NAB2Q15742 525 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 RAB30Q15771 203 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 SPRED2Q7Z698 418 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 CSGALNACT2Q8N6G5 542 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 RSPH1Q8WYR4 309 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 PPP1R10Q96QC0 940 aaKnown RBP20.92■□□□□ 0.94
CCM2-216ENST00000488727 CWH43Q9H720 699 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 KIAA1586Q9HCI6 787 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 ADGRG1Q9Y653 693 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 CHD7Q9P2D1 2997 aa20.92■□□□□ 0.94
CCM2-216ENST00000488727 LINC01553A4QN01 128 aa20.91■□□□□ 0.94
CCM2-216ENST00000488727 SOX1O00570 391 aaPredicted RBP20.91■□□□□ 0.94
CCM2-216ENST00000488727 DDHD2O94830 711 aa20.91■□□□□ 0.94
CCM2-216ENST00000488727 KCNE1P15382 129 aa20.91■□□□□ 0.94
CCM2-216ENST00000488727 RPL13P26373 211 aaKnown RBP20.91■□□□□ 0.94
CCM2-216ENST00000488727 FKBP3Q00688 224 aaKnown RBP20.91■□□□□ 0.94
CCM2-216ENST00000488727 UBXN1Q04323 297 aa20.91■□□□□ 0.94
CCM2-216ENST00000488727 GRIK3Q13003 919 aa20.91■□□□□ 0.94
CCM2-216ENST00000488727 PDCL2Q8N4E4 241 aa20.91■□□□□ 0.94
CCM2-216ENST00000488727 FIBCD1Q8N539 461 aa20.91■□□□□ 0.94
CCM2-216ENST00000488727 CPLX3Q8WVH0 158 aa20.91■□□□□ 0.94
CCM2-216ENST00000488727 NKX2-4Q9H2Z4 354 aa20.91■□□□□ 0.94
CCM2-216ENST00000488727 PDE11AQ9HCR9 933 aa20.91■□□□□ 0.94
CCM2-216ENST00000488727 KANSL3Q9P2N6 904 aa20.91■□□□□ 0.94
CCM2-216ENST00000488727 MTF1Q14872 753 aa20.9■□□□□ 0.94
CCM2-216ENST00000488727 TMEM130Q8N3G9 435 aa20.9■□□□□ 0.94
CCM2-216ENST00000488727 ASB7Q9H672 318 aa20.9■□□□□ 0.94
CCM2-216ENST00000488727 NRDE2Q9H7Z3 1164 aa20.9■□□□□ 0.94
CCM2-216ENST00000488727 DNAJB4Q9UDY4 337 aa20.9■□□□□ 0.94
CCM2-216ENST00000488727 MSRAQ9UJ68 235 aa20.9■□□□□ 0.94
CCM2-216ENST00000488727 FANCGO15287 622 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms