RNA–Protein interactions for RNA: ENST00000488723.1

CDK5RAP1-214, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-214ENST00000488723 PMS1P54277 932 aaKnown RBP18.48■□□□□ 0.55
CDK5RAP1-214ENST00000488723 SOX4Q06945 474 aaPredicted RBP18.48■□□□□ 0.55
CDK5RAP1-214ENST00000488723 BMS1Q14692 1282 aaKnown RBP18.48■□□□□ 0.55
CDK5RAP1-214ENST00000488723 CEP135Q66GS9 1140 aa18.48■□□□□ 0.55
CDK5RAP1-214ENST00000488723 KLHL10Q6JEL2 608 aa18.48■□□□□ 0.55
CDK5RAP1-214ENST00000488723 CAVIN1Q6NZI2 390 aaKnown RBP18.48■□□□□ 0.55
CDK5RAP1-214ENST00000488723 SPRED2Q7Z698 418 aa18.48■□□□□ 0.55
CDK5RAP1-214ENST00000488723 NOC3LQ8WTT2 800 aaKnown RBP18.48■□□□□ 0.55
CDK5RAP1-214ENST00000488723 C18orf25Q96B23 403 aaPredicted RBP18.48■□□□□ 0.55
CDK5RAP1-214ENST00000488723 CERS4Q9HA82 394 aa18.48■□□□□ 0.55
CDK5RAP1-214ENST00000488723 INTS13Q9NVM9 706 aa18.48■□□□□ 0.55
CDK5RAP1-214ENST00000488723 ANO10Q9NW15 660 aa18.48■□□□□ 0.55
CDK5RAP1-214ENST00000488723 MTMR10Q9NXD2 777 aa18.48■□□□□ 0.55
CDK5RAP1-214ENST00000488723 ADAM28Q9UKQ2 775 aa18.48■□□□□ 0.55
CDK5RAP1-214ENST00000488723 CDH23Q9H251 3354 aa18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 ANO9A1A5B4 782 aa18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 CASTOR2A6NHX0 329 aa18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 PODXLO00592 558 aa18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 TADA2AO75478 443 aa18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 GNA14O95837 355 aa18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 EPB41P11171 864 aaKnown RBP18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 CASP4P49662 377 aa18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 NFKBIBQ15653 356 aa18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 EFCAB13Q8IY85 973 aa18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 FAM186BQ8IYM0 893 aa18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 RNF168Q8IYW5 571 aaPredicted RBP18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 MRPL38Q96DV4 380 aaKnown RBP18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 ANKRD36BP1Q96IX9 119 aa18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 GAS2L1Q99501 681 aaPredicted RBP18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 CGRRF1Q99675 332 aa18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 DUSP9Q99956 384 aaKnown RBP18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 PRDM12Q9H4Q4 367 aa18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 METTL14Q9HCE5 456 aaKnown RBP18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 NGRNQ9NPE2 291 aaKnown RBP18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 MARCH5Q9NX47 278 aa18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 DPP3Q9NY33 737 aa18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 ITGA11Q9UKX5 1188 aa18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 MYO7AQ13402 2215 aa18.47■□□□□ 0.55
CDK5RAP1-214ENST00000488723 EPOPA6NHQ4 379 aa18.46■□□□□ 0.55
CDK5RAP1-214ENST00000488723 NT5C1B-RDH14C9J2C7 533 aa18.46■□□□□ 0.55
CDK5RAP1-214ENST00000488723 PIRO00625 290 aa18.46■□□□□ 0.55
CDK5RAP1-214ENST00000488723 B3GAT3O94766 335 aa18.46■□□□□ 0.55
CDK5RAP1-214ENST00000488723 KRT13P13646 458 aa18.46■□□□□ 0.55
CDK5RAP1-214ENST00000488723 TNNI1P19237 187 aa18.46■□□□□ 0.55
CDK5RAP1-214ENST00000488723 PBX3P40426 434 aa18.46■□□□□ 0.55
CDK5RAP1-214ENST00000488723 SPAG1Q07617 926 aa18.46■□□□□ 0.55
CDK5RAP1-214ENST00000488723 DPCR1Q3MIW9 517 aa18.46■□□□□ 0.55
CDK5RAP1-214ENST00000488723 FRMD5Q7Z6J6 570 aa18.46■□□□□ 0.55
CDK5RAP1-214ENST00000488723 CSGALNACT2Q8N6G5 542 aa18.46■□□□□ 0.55
CDK5RAP1-214ENST00000488723 BORCS6Q96GS4 357 aa18.46■□□□□ 0.55
CDK5RAP1-214ENST00000488723 ALG13Q9NP73 1137 aaKnown RBP18.46■□□□□ 0.55
CDK5RAP1-214ENST00000488723 TUBGCP4Q9UGJ1 667 aa18.46■□□□□ 0.55
CDK5RAP1-214ENST00000488723 CTNND2Q9UQB3 1225 aa18.46■□□□□ 0.55
CDK5RAP1-214ENST00000488723 SSX2IPQ9Y2D8 614 aa18.46■□□□□ 0.55
CDK5RAP1-214ENST00000488723 PRG3Q9Y2Y8 225 aaPredicted RBP18.46■□□□□ 0.55
CDK5RAP1-214ENST00000488723 IRAK3Q9Y616 596 aa18.46■□□□□ 0.55
CDK5RAP1-214ENST00000488723 SF3B1O75533 1304 aaKnown RBP eCLIP18.46■□□□□ 0.55
CDK5RAP1-214ENST00000488723 TRIM49BA6NDI0 452 aa18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 GRM6O15303 877 aa18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 TNNC2P02585 160 aa18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 SOD2P04179 222 aa18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 TMEM191BP0C7N4 346 aa18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 GTF2H1P32780 548 aa18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 PNPLA4P41247 253 aa18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 VAMP7P51809 220 aa18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 WNT7BP56706 349 aa18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 TFAMQ00059 246 aaKnown RBP18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 STX1AQ16623 288 aa18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 C9orf57Q5W0N0 161 aa18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 TMEM173Q86WV6 379 aaPredicted RBP18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 POF1BQ8WVV4 589 aa18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 CCDC127Q96BQ5 260 aa18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 CDX2Q99626 313 aaPredicted RBP18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 PAAF1Q9BRP4 392 aa18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 GZF1Q9H116 711 aaPredicted RBP18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 GOLGA2P5Q9HBQ8 144 aa18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 TLR9Q9NR96 1032 aa18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 CHST7Q9NS84 486 aa18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 PRRC2BQ5JSZ5 2229 aaKnown RBP18.45■□□□□ 0.54
CDK5RAP1-214ENST00000488723 ARHGEF37A1IGU5 675 aa18.44■□□□□ 0.54
CDK5RAP1-214ENST00000488723 STX10O60499 249 aa18.44■□□□□ 0.54
CDK5RAP1-214ENST00000488723 KIF4AO95239 1232 aa18.44■□□□□ 0.54
CDK5RAP1-214ENST00000488723 DLATP10515 647 aaKnown RBP18.44■□□□□ 0.54
CDK5RAP1-214ENST00000488723 AARSP49588 968 aaKnown RBP eCLIP18.44■□□□□ 0.54
CDK5RAP1-214ENST00000488723 MARSP56192 900 aaKnown RBP18.44■□□□□ 0.54
CDK5RAP1-214ENST00000488723 RBP5P82980 135 aa18.44■□□□□ 0.54
CDK5RAP1-214ENST00000488723 BFSP1Q12934 665 aa18.44■□□□□ 0.54
CDK5RAP1-214ENST00000488723 CAMK1Q14012 370 aa18.44■□□□□ 0.54
CDK5RAP1-214ENST00000488723 USP41Q3LFD5 358 aa18.44■□□□□ 0.54
CDK5RAP1-214ENST00000488723 FUT10Q6P4F1 479 aa18.44■□□□□ 0.54
CDK5RAP1-214ENST00000488723 CD300LGQ6UXG3 332 aa18.44■□□□□ 0.54
CDK5RAP1-214ENST00000488723 Q7L0L9 218 aa18.44■□□□□ 0.54
CDK5RAP1-214ENST00000488723 VPS52Q8N1B4 723 aa18.44■□□□□ 0.54
CDK5RAP1-214ENST00000488723 LRRC52Q8N7C0 313 aa18.44■□□□□ 0.54
CDK5RAP1-214ENST00000488723 GDPD5Q8WTR4 605 aa18.44■□□□□ 0.54
CDK5RAP1-214ENST00000488723 BCL7CQ8WUZ0 217 aaPredicted RBP18.44■□□□□ 0.54
CDK5RAP1-214ENST00000488723 ARMCX3Q9UH62 379 aaPredicted RBP18.44■□□□□ 0.54
CDK5RAP1-214ENST00000488723 R3HCC1Q9Y3T6 440 aaKnown RBP18.44■□□□□ 0.54
CDK5RAP1-214ENST00000488723 FSCN2O14926 492 aa18.43■□□□□ 0.54
CDK5RAP1-214ENST00000488723 CTSAP10619 480 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms