RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 ZNF483Q8TF39 744 aaPredicted RBP5.59□□□□□ -1.51
ITGB1-214ENST00000488427 CACTINQ8WUQ7 758 aaKnown RBP5.59□□□□□ -1.51
ITGB1-214ENST00000488427 STAG1Q8WVM7 1258 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 HAS1Q92839 578 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 MTFMTQ96DP5 389 aaKnown RBP5.59□□□□□ -1.51
ITGB1-214ENST00000488427 ZNF503Q96F45 646 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 CLPTM1LQ96KA5 538 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 MAP3K14Q99558 947 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 PCGF6Q9BYE7 350 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 RNPEPQ9H4A4 650 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 TRPM5Q9NZQ8 1165 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 SIK3Q9Y2K2 1263 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 ACTL7AQ9Y615 435 aa5.59□□□□□ -1.51
ITGB1-214ENST00000488427 ADAMTSL3P82987 1691 aa5.59□□□□□ -1.52
ITGB1-214ENST00000488427 ABLIM3O94929 683 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 ANXA1P04083 346 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 ADH4P08319 380 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 PF4V1P10720 104 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 C6P13671 934 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 ZSCAN20P17040 1043 aaPredicted RBP5.58□□□□□ -1.52
ITGB1-214ENST00000488427 LAG3P18627 525 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 APOBEC3AP31941 199 aaPredicted RBP5.58□□□□□ -1.52
ITGB1-214ENST00000488427 MCL1Q07820 350 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 GTF2H3Q13889 308 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 UBXN2BQ14CS0 331 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 PLEKHG6Q3KR16 790 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 CCDC157Q569K6 752 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 C1QL3Q5VWW1 255 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 USP45Q70EL2 814 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 RHOT2Q8IXI1 618 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 RNF169Q8NCN4 708 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 OR2I1PQ8NGU4 316 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 STON2Q8WXE9 905 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 NMRK2Q9NPI5 230 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 RNF181Q9P0P0 153 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 CEP72Q9P209 647 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 LIMCH1Q9UPQ0 1083 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 RUVBL1Q9Y265 456 aaKnown RBP5.58□□□□□ -1.52
ITGB1-214ENST00000488427 PCDHA13Q9Y5I0 950 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 FPGT-TNNI3KV9GXZ4 949 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 ADCY10Q96PN6 1610 aa5.58□□□□□ -1.52
ITGB1-214ENST00000488427 OVOL3O00110 214 aa5.57□□□□□ -1.52
ITGB1-214ENST00000488427 KIAA0391O15091 583 aaKnown RBP5.57□□□□□ -1.52
ITGB1-214ENST00000488427 ZNF202O95125 648 aa5.57□□□□□ -1.52
ITGB1-214ENST00000488427 PDCP20941 246 aa5.57□□□□□ -1.52
ITGB1-214ENST00000488427 ATP8B2P98198 1209 aa5.57□□□□□ -1.52
ITGB1-214ENST00000488427 ODF1Q14990 250 aa5.57□□□□□ -1.52
ITGB1-214ENST00000488427 PGS1Q32NB8 556 aa5.57□□□□□ -1.52
ITGB1-214ENST00000488427 TIGD2Q4W5G0 525 aa5.57□□□□□ -1.52
ITGB1-214ENST00000488427 LY6G5CQ5SRR4 150 aa5.57□□□□□ -1.52
ITGB1-214ENST00000488427 ANKS6Q68DC2 871 aa5.57□□□□□ -1.52
ITGB1-214ENST00000488427 CRIP3Q6Q6R5 217 aa5.57□□□□□ -1.52
ITGB1-214ENST00000488427 FBXO18Q8NFZ0 1043 aa5.57□□□□□ -1.52
ITGB1-214ENST00000488427 SLC35B2Q8TB61 432 aa5.57□□□□□ -1.52
ITGB1-214ENST00000488427 NSUN6Q8TEA1 469 aaKnown RBP5.57□□□□□ -1.52
ITGB1-214ENST00000488427 LENG9Q96B70 501 aa5.57□□□□□ -1.52
ITGB1-214ENST00000488427 RGMAQ96B86 450 aa5.57□□□□□ -1.52
ITGB1-214ENST00000488427 AIFM3Q96NN9 605 aa5.57□□□□□ -1.52
ITGB1-214ENST00000488427 PUS7Q96PZ0 661 aaKnown RBP5.57□□□□□ -1.52
ITGB1-214ENST00000488427 ZNF747Q9BV97 191 aa5.57□□□□□ -1.52
ITGB1-214ENST00000488427 SIK2Q9H0K1 926 aa5.57□□□□□ -1.52
ITGB1-214ENST00000488427 CDH19Q9H159 772 aa5.57□□□□□ -1.52
ITGB1-214ENST00000488427 WDCPQ9H6R7 721 aa5.57□□□□□ -1.52
ITGB1-214ENST00000488427 SIDT1Q9NXL6 827 aaKnown RBP5.57□□□□□ -1.52
ITGB1-214ENST00000488427 FEZ2Q9UHY8 353 aaPredicted RBP5.57□□□□□ -1.52
ITGB1-214ENST00000488427 FZD1Q9UP38 647 aa5.57□□□□□ -1.52
ITGB1-214ENST00000488427 NOX1Q9Y5S8 564 aa5.57□□□□□ -1.52
ITGB1-214ENST00000488427 DRGXA6NNA5 263 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 AKAP10O43572 662 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 MARCH6O60337 910 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 FAM20BO75063 409 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 RPS6KA4O75676 772 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 RFPL1O75677 317 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 ZRANB2O95218 330 aaKnown RBP eCLIP5.56□□□□□ -1.52
ITGB1-214ENST00000488427 AMY1AP04745 511 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 ITGB1P05556 798 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 POU2F2P09086 479 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 C1SP09871 688 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 PCSK1P29120 753 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 CHN2P52757 468 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 RNASE9P60153 205 aaKnown RBP5.56□□□□□ -1.52
ITGB1-214ENST00000488427 BLOC1S1P78537 153 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 C3orf36Q3SXR2 165 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 IFIT1BQ5T764 474 aaKnown RBP5.56□□□□□ -1.52
ITGB1-214ENST00000488427 AGAP9Q5VTM2 703 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 CXorf57Q6NSI4 855 aaKnown RBP5.56□□□□□ -1.52
ITGB1-214ENST00000488427 MED25Q71SY5 747 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 FAM43AQ8N2R8 423 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 IFI44Q8TCB0 444 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 NUP133Q8WUM0 1156 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 JPH3Q8WXH2 748 aaPredicted RBP5.56□□□□□ -1.52
ITGB1-214ENST00000488427 PHACTR3Q96KR7 559 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 MED15Q96RN5 788 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 SCAND2PQ9GZW5 306 aaPredicted RBP5.56□□□□□ -1.52
ITGB1-214ENST00000488427 NRDE2Q9H7Z3 1164 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 RLIMQ9NVW2 624 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 CFAP97Q9P2B7 532 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 NEU2Q9Y3R4 380 aa5.56□□□□□ -1.52
ITGB1-214ENST00000488427 TDRD9Q8NDG6 1382 aaKnown RBP5.55□□□□□ -1.52
ITGB1-214ENST00000488427 GOLGA6CA6NDK9 693 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms