RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 C5orf42Q9H799 3197 aa25.83■■□□□ 1.73
RNF38-208ENST00000488058 C2orf16Q68DN1 1984 aa25.83■■□□□ 1.73
RNF38-208ENST00000488058 CCDC195A0A1B0GUA6 201 aa25.82■■□□□ 1.72
RNF38-208ENST00000488058 TTC26A0AVF1 554 aa25.82■■□□□ 1.72
RNF38-208ENST00000488058 LACTBL1A8MY62 500 aa25.82■■□□□ 1.72
RNF38-208ENST00000488058 RFPL2O75678 378 aa25.82■■□□□ 1.72
RNF38-208ENST00000488058 RPL9P32969 192 aaKnown RBP25.82■■□□□ 1.72
RNF38-208ENST00000488058 MCM4P33991 863 aa25.82■■□□□ 1.72
RNF38-208ENST00000488058 ENOX2Q16206 610 aaKnown RBP25.82■■□□□ 1.72
RNF38-208ENST00000488058 TMEM31Q5JXX7 168 aa25.82■■□□□ 1.72
RNF38-208ENST00000488058 SLFN12LQ6IEE8 588 aa25.82■■□□□ 1.72
RNF38-208ENST00000488058 CCDC65Q8IXS2 484 aa25.82■■□□□ 1.72
RNF38-208ENST00000488058 TMEM130Q8N3G9 435 aa25.82■■□□□ 1.72
RNF38-208ENST00000488058 IQUBQ8NA54 791 aa25.82■■□□□ 1.72
RNF38-208ENST00000488058 CUEDC2Q9H467 287 aa25.82■■□□□ 1.72
RNF38-208ENST00000488058 EXOC7Q9UPT5 735 aa25.82■■□□□ 1.72
RNF38-208ENST00000488058 TULP1O00294 542 aaPredicted RBP25.81■■□□□ 1.72
RNF38-208ENST00000488058 FAM189A1O60320 539 aa25.81■■□□□ 1.72
RNF38-208ENST00000488058 PPP1R37O75864 691 aa25.81■■□□□ 1.72
RNF38-208ENST00000488058 ACOT2P49753 483 aa25.81■■□□□ 1.72
RNF38-208ENST00000488058 CASP5P51878 434 aa25.81■■□□□ 1.72
RNF38-208ENST00000488058 L1TD1Q5T7N2 865 aaKnown RBP25.81■■□□□ 1.72
RNF38-208ENST00000488058 KREMEN2Q8NCW0 462 aa25.81■■□□□ 1.72
RNF38-208ENST00000488058 POMGNT1Q8WZA1 660 aa25.81■■□□□ 1.72
RNF38-208ENST00000488058 ACCSQ96QU6 501 aa25.81■■□□□ 1.72
RNF38-208ENST00000488058 PLEKHA4Q9H4M7 779 aa25.81■■□□□ 1.72
RNF38-208ENST00000488058 OLFML3Q9NRN5 406 aa25.81■■□□□ 1.72
RNF38-208ENST00000488058 CPSF3Q9UKF6 684 aaKnown RBP25.81■■□□□ 1.72
RNF38-208ENST00000488058 AGO2Q9UKV8 859 aaKnown RBP25.81■■□□□ 1.72
RNF38-208ENST00000488058 UBQLN1Q9UMX0 589 aaKnown RBP25.81■■□□□ 1.72
RNF38-208ENST00000488058 C2CD4DB7Z1M9 353 aa25.8■■□□□ 1.72
RNF38-208ENST00000488058 POLR2DO15514 142 aaKnown RBP25.8■■□□□ 1.72
RNF38-208ENST00000488058 ADAM12O43184 909 aa25.8■■□□□ 1.72
RNF38-208ENST00000488058 ASIC1P78348 528 aa25.8■■□□□ 1.72
RNF38-208ENST00000488058 AMPD3Q01432 767 aa25.8■■□□□ 1.72
RNF38-208ENST00000488058 KCNA1Q09470 495 aa25.8■■□□□ 1.72
RNF38-208ENST00000488058 LILRA6Q6PI73 481 aa25.8■■□□□ 1.72
RNF38-208ENST00000488058 SYCP3Q8IZU3 236 aa25.8■■□□□ 1.72
RNF38-208ENST00000488058 FGFBP2Q9BYJ0 223 aa25.8■■□□□ 1.72
RNF38-208ENST00000488058 PIDD1Q9HB75 910 aa25.8■■□□□ 1.72
RNF38-208ENST00000488058 KBTBD4Q9NVX7 518 aa25.8■■□□□ 1.72
RNF38-208ENST00000488058 PCDHB13Q9Y5F0 798 aa25.8■■□□□ 1.72
RNF38-208ENST00000488058 DENND4AQ7Z401 1863 aa25.8■■□□□ 1.72
RNF38-208ENST00000488058 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.79■■□□□ 1.72
RNF38-208ENST00000488058 FRMD3A2A2Y4 597 aa25.79■■□□□ 1.72
RNF38-208ENST00000488058 XPOTO43592 962 aaKnown RBP25.79■■□□□ 1.72
RNF38-208ENST00000488058 OR1D2P34982 312 aa25.79■■□□□ 1.72
RNF38-208ENST00000488058 GUCY2FP51841 1108 aa25.79■■□□□ 1.72
RNF38-208ENST00000488058 JADE1Q6IE81 842 aa25.79■■□□□ 1.72
RNF38-208ENST00000488058 C15orf39Q6ZRI6 1047 aa25.79■■□□□ 1.72
RNF38-208ENST00000488058 CCDC149Q6ZUS6 474 aa25.79■■□□□ 1.72
RNF38-208ENST00000488058 ANKS3Q6ZW76 656 aa25.79■■□□□ 1.72
RNF38-208ENST00000488058 TDRD5Q8NAT2 981 aaKnown RBP25.79■■□□□ 1.72
RNF38-208ENST00000488058 CMASQ8NFW8 434 aaPredicted RBP25.79■■□□□ 1.72
RNF38-208ENST00000488058 HDAC7Q8WUI4 952 aa25.79■■□□□ 1.72
RNF38-208ENST00000488058 SMG7Q92540 1137 aaKnown RBP25.79■■□□□ 1.72
RNF38-208ENST00000488058 CHAMP1Q96JM3 812 aa25.79■■□□□ 1.72
RNF38-208ENST00000488058 LRFN3Q9BTN0 628 aa25.79■■□□□ 1.72
RNF38-208ENST00000488058 STRA6Q9BX79 667 aa25.79■■□□□ 1.72
RNF38-208ENST00000488058 C11orf16Q9NQ32 467 aa25.79■■□□□ 1.72
RNF38-208ENST00000488058 MTRRQ9UBK8 725 aa25.79■■□□□ 1.72
RNF38-208ENST00000488058 RCOR1Q9UKL0 485 aa25.79■■□□□ 1.72
RNF38-208ENST00000488058 ZDHHC9Q9Y397 364 aa25.79■■□□□ 1.72
RNF38-208ENST00000488058 CDY1Q9Y6F8 540 aa25.79■■□□□ 1.72
RNF38-208ENST00000488058 ALCAMQ13740 583 aa25.78■■□□□ 1.72
RNF38-208ENST00000488058 LIN9Q5TKA1 542 aa25.78■■□□□ 1.72
RNF38-208ENST00000488058 RESP18Q5W5W9 173 aa25.78■■□□□ 1.72
RNF38-208ENST00000488058 TRIM9Q9C026 710 aa25.78■■□□□ 1.72
RNF38-208ENST00000488058 FBXW11Q9UKB1 542 aa25.78■■□□□ 1.72
RNF38-208ENST00000488058 STYXL1Q9Y6J8 313 aa25.78■■□□□ 1.72
RNF38-208ENST00000488058 ANK1P16157 1881 aa25.77■■□□□ 1.72
RNF38-208ENST00000488058 GPR37L1O60883 481 aa25.77■■□□□ 1.72
RNF38-208ENST00000488058 PRPF6O94906 941 aaKnown RBP25.77■■□□□ 1.72
RNF38-208ENST00000488058 C1RP00736 705 aa25.77■■□□□ 1.72
RNF38-208ENST00000488058 KRT85P78386 507 aa25.77■■□□□ 1.72
RNF38-208ENST00000488058 BECN1Q14457 450 aa25.77■■□□□ 1.72
RNF38-208ENST00000488058 POSTNQ15063 836 aa25.77■■□□□ 1.72
RNF38-208ENST00000488058 VARS2Q5ST30 1063 aaKnown RBP25.77■■□□□ 1.72
RNF38-208ENST00000488058 RSPO2Q6UXX9 243 aaPredicted RBP25.77■■□□□ 1.72
RNF38-208ENST00000488058 CD302Q8IX05 232 aa25.77■■□□□ 1.72
RNF38-208ENST00000488058 NOC3LQ8WTT2 800 aaKnown RBP25.77■■□□□ 1.72
RNF38-208ENST00000488058 HPS3Q969F9 1004 aa25.77■■□□□ 1.72
RNF38-208ENST00000488058 SPATA32Q96LK8 384 aa25.77■■□□□ 1.72
RNF38-208ENST00000488058 ZMYND10O75800 440 aa25.76■■□□□ 1.71
RNF38-208ENST00000488058 NFICP08651 508 aa25.76■■□□□ 1.71
RNF38-208ENST00000488058 CYP3A5P20815 502 aa25.76■■□□□ 1.71
RNF38-208ENST00000488058 LRPAP1P30533 357 aa25.76■■□□□ 1.71
RNF38-208ENST00000488058 ARPP19P56211 112 aa25.76■■□□□ 1.71
RNF38-208ENST00000488058 ZBTB6Q15916 424 aa25.76■■□□□ 1.71
RNF38-208ENST00000488058 BEST2Q8NFU1 509 aa25.76■■□□□ 1.71
RNF38-208ENST00000488058 ZDHHC7Q9NXF8 308 aa25.76■■□□□ 1.71
RNF38-208ENST00000488058 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.76■■□□□ 1.71
RNF38-208ENST00000488058 BACE2Q9Y5Z0 518 aa25.76■■□□□ 1.71
RNF38-208ENST00000488058 SYN3O14994 580 aa25.75■■□□□ 1.71
RNF38-208ENST00000488058 C8AP07357 584 aa25.75■■□□□ 1.71
RNF38-208ENST00000488058 COL9A1P20849 921 aa25.75■■□□□ 1.71
RNF38-208ENST00000488058 ADSSP30520 456 aa25.75■■□□□ 1.71
RNF38-208ENST00000488058 AFMP43652 599 aa25.75■■□□□ 1.71
RNF38-208ENST00000488058 RAB33AQ14088 237 aa25.75■■□□□ 1.71
RNF38-208ENST00000488058 TMEM132DQ14C87 1099 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms