RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 CXorf38Q8TB03 319 aa10.15□□□□□ -0.78
SF3B1-211ENST00000487698 FAM212AQ96EL1 285 aa10.15□□□□□ -0.78
SF3B1-211ENST00000487698 NAPGQ99747 312 aaPredicted RBP10.15□□□□□ -0.78
SF3B1-211ENST00000487698 XYLT2Q9H1B5 865 aa10.15□□□□□ -0.78
SF3B1-211ENST00000487698 DDX20Q9UHI6 824 aaKnown RBP10.15□□□□□ -0.78
SF3B1-211ENST00000487698 CNTN6Q9UQ52 1028 aa10.15□□□□□ -0.78
SF3B1-211ENST00000487698 MRFAP1Q9Y605 127 aa10.15□□□□□ -0.78
SF3B1-211ENST00000487698 UMODL1Q5DID0 1318 aa10.15□□□□□ -0.78
SF3B1-211ENST00000487698 ANO9A1A5B4 782 aa10.15□□□□□ -0.79
SF3B1-211ENST00000487698 FKTNO75072 461 aa10.15□□□□□ -0.79
SF3B1-211ENST00000487698 PHACTR2O75167 634 aa10.15□□□□□ -0.79
SF3B1-211ENST00000487698 URI1O94763 535 aaPredicted RBP10.15□□□□□ -0.79
SF3B1-211ENST00000487698 TNNC2P02585 160 aa10.15□□□□□ -0.79
SF3B1-211ENST00000487698 TMEM191BP0C7N4 346 aa10.15□□□□□ -0.79
SF3B1-211ENST00000487698 USP8P40818 1118 aa10.15□□□□□ -0.79
SF3B1-211ENST00000487698 MYL6P60660 151 aa10.15□□□□□ -0.79
SF3B1-211ENST00000487698 TFAMQ00059 246 aaKnown RBP10.15□□□□□ -0.79
SF3B1-211ENST00000487698 KCNA10Q16322 511 aa10.15□□□□□ -0.79
SF3B1-211ENST00000487698 SMYD5Q6GMV2 418 aa10.15□□□□□ -0.79
SF3B1-211ENST00000487698 JADE1Q6IE81 842 aa10.15□□□□□ -0.79
SF3B1-211ENST00000487698 NOTUMQ6P988 496 aa10.15□□□□□ -0.79
SF3B1-211ENST00000487698 APBB1IPQ7Z5R6 666 aaPredicted RBP10.15□□□□□ -0.79
SF3B1-211ENST00000487698 TRIM58Q8NG06 486 aa10.15□□□□□ -0.79
SF3B1-211ENST00000487698 RAET1EQ8TD07 263 aa10.15□□□□□ -0.79
SF3B1-211ENST00000487698 U2AF1L4Q8WU68 220 aaKnown RBP10.15□□□□□ -0.79
SF3B1-211ENST00000487698 DDX1Q92499 740 aaKnown RBP10.15□□□□□ -0.79
SF3B1-211ENST00000487698 ANKRD36BP1Q96IX9 119 aa10.15□□□□□ -0.79
SF3B1-211ENST00000487698 ACP6Q9NPH0 428 aa10.15□□□□□ -0.79
SF3B1-211ENST00000487698 SIX4Q9UIU6 781 aa10.15□□□□□ -0.79
SF3B1-211ENST00000487698 GRIN2DO15399 1336 aa10.14□□□□□ -0.79
SF3B1-211ENST00000487698 MOCS3O95396 460 aa10.14□□□□□ -0.79
SF3B1-211ENST00000487698 NPTXRO95502 500 aa10.14□□□□□ -0.79
SF3B1-211ENST00000487698 CYP11B1P15538 503 aa10.14□□□□□ -0.79
SF3B1-211ENST00000487698 TNFAIP3P21580 790 aa10.14□□□□□ -0.79
SF3B1-211ENST00000487698 MRPS6P82932 125 aaKnown RBP10.14□□□□□ -0.79
SF3B1-211ENST00000487698 FMO1Q01740 532 aa10.14□□□□□ -0.79
SF3B1-211ENST00000487698 SGSM1Q2NKQ1 1148 aa10.14□□□□□ -0.79
SF3B1-211ENST00000487698 RPAINQ86UA6 219 aa10.14□□□□□ -0.79
SF3B1-211ENST00000487698 C1orf127Q8N9H9 656 aa10.14□□□□□ -0.79
SF3B1-211ENST00000487698 PCSK9Q8NBP7 692 aaKnown RBP10.14□□□□□ -0.79
SF3B1-211ENST00000487698 ZNF296Q8WUU4 475 aaPredicted RBP10.14□□□□□ -0.79
SF3B1-211ENST00000487698 WNT8BQ93098 351 aa10.14□□□□□ -0.79
SF3B1-211ENST00000487698 ACAP3Q96P50 834 aa10.14□□□□□ -0.79
SF3B1-211ENST00000487698 EIF2AQ9BY44 585 aaKnown RBP10.14□□□□□ -0.79
SF3B1-211ENST00000487698 CELF4Q9BZC1 486 aaKnown RBP10.14□□□□□ -0.79
SF3B1-211ENST00000487698 IMPG2Q9BZV3 1241 aa10.14□□□□□ -0.79
SF3B1-211ENST00000487698 C2CD2Q9Y426 696 aa10.14□□□□□ -0.79
SF3B1-211ENST00000487698 PCDHGC5Q9Y5F6 944 aa10.14□□□□□ -0.79
SF3B1-211ENST00000487698 NCANO14594 1321 aa10.14□□□□□ -0.79
SF3B1-211ENST00000487698 SCN1AP35498 2009 aa10.14□□□□□ -0.79
SF3B1-211ENST00000487698 A0A0A6YYK5 440 aaPredicted RBP10.13□□□□□ -0.79
SF3B1-211ENST00000487698 TACC1O75410 805 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 H2AFZP0C0S5 128 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 PDE6CP51160 858 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 PRMT2P55345 433 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 CDR2Q01850 454 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 NCBP1Q09161 790 aaKnown RBP10.13□□□□□ -0.79
SF3B1-211ENST00000487698 PAPD7Q5XG87 772 aaKnown RBP10.13□□□□□ -0.79
SF3B1-211ENST00000487698 H2AFVQ71UI9 128 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 DNAAF5Q86Y56 855 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 NT5DC4Q86YG4 428 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 CD302Q8IX05 232 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 RPUSD2Q8IZ73 545 aaKnown RBP10.13□□□□□ -0.79
SF3B1-211ENST00000487698 SLAIN1Q8ND83 568 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 TAF4BQ92750 862 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 NOX5Q96PH1 765 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 PCDHB18PQ96TA0 734 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 NIF3L1Q9GZT8 377 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 ISCUQ9H1K1 167 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 TAS2R14Q9NYV8 317 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 DNAH12Q6ZR08 3092 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 SLU7O95391 586 aaKnown RBP10.13□□□□□ -0.79
SF3B1-211ENST00000487698 ATP1A1P05023 1023 aaKnown RBP10.13□□□□□ -0.79
SF3B1-211ENST00000487698 INHAP05111 366 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 RPLP2P05387 115 aaKnown RBP10.13□□□□□ -0.79
SF3B1-211ENST00000487698 TMEM253P0C7T8 217 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 GZMAP12544 262 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 KRT5P13647 590 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 ASPAP45381 313 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 ZNF132P52740 706 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 GALCP54803 685 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 TRPC3Q13507 836 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 TUBB2AQ13885 445 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 TMEM132DQ14C87 1099 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 ZNF699Q32M78 642 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 UBXN11Q5T124 520 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 FAM228AQ86W67 206 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 SNX27Q96L92 541 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 ALS2CR12Q96Q35 445 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 TUBB2BQ9BVA1 445 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 CCDC94Q9BW85 323 aaPredicted RBP10.13□□□□□ -0.79
SF3B1-211ENST00000487698 SENP6Q9GZR1 1112 aaPredicted RBP10.13□□□□□ -0.79
SF3B1-211ENST00000487698 PLEKHA5Q9HAU0 1116 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 CDC23Q9UJX2 597 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 PIN4Q9Y237 131 aaKnown RBP10.13□□□□□ -0.79
SF3B1-211ENST00000487698 DERAQ9Y315 318 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 TRPV2Q9Y5S1 764 aa10.13□□□□□ -0.79
SF3B1-211ENST00000487698 BUB1O43683 1085 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 CABYRO75952 493 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 MMEP08473 750 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms