RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 ATG4DQ86TL0 474 aaPredicted RBP7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 ZNF589Q86UQ0 364 aaPredicted RBP7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 TICAM2Q86XR7 235 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 FOXP4Q8IVH2 680 aaPredicted RBP7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 NOSTRINQ8IVI9 506 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 CEP89Q96ST8 783 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 IL25Q9H293 177 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 DHX36Q9H2U1 1008 aaKnown RBP7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 DNAJC18Q9H819 358 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 EPB41L4AQ9HCS5 686 aaPredicted RBP7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 EMC7Q9NPA0 242 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 HELLSQ9NRZ9 838 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 ATP8A2Q9NTI2 1148 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 MCM9Q9NXL9 1143 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 PI4KBQ9UBF8 816 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 ASH2LQ9UBL3 628 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 RBBP6Q7Z6E9 1792 aaKnown RBP7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 NCOR1O75376 2440 aa7.3□□□□□ -1.24
RTFDC1-209ENST00000487211 DOCK2Q92608 1830 aa7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 ZFHX4Q86UP3 3567 aa7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 CLASP2O75122 1294 aaKnown RBP7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 KATNA1O75449 491 aa7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 CHMLP26374 656 aa7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 EXOSC10Q01780 885 aaKnown RBP7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 GABPAQ06546 454 aa7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 GRM1Q13255 1194 aa7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 VGLL4Q14135 290 aa7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 NR1I3Q14994 352 aa7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 SHROOM1Q2M3G4 852 aaPredicted RBP7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 C12orf60Q5U649 245 aa7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 IQSEC1Q6DN90 963 aa7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 NECAB2Q7Z6G3 386 aa7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 KIAA1958Q8N8K9 716 aa7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 WRNIP1Q96S55 665 aa7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 ZNF341Q9BYN7 854 aa7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 SLC6A17Q9H1V8 727 aa7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 PCIF1Q9H4Z3 704 aa7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 RIC8BQ9NVN3 520 aa7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 TELO2Q9Y4R8 837 aa7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 RPAP1Q9BWH6 1393 aaPredicted RBP7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 SETXQ7Z333 2677 aaKnown RBP7.29□□□□□ -1.24
RTFDC1-209ENST00000487211 TCRBV5S2A0A599 114 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 DVL2O14641 736 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 FGAP02671 866 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 HSPD1P10809 573 aaKnown RBP7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 GNAT2P19087 354 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 SLC9A1P19634 815 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 KIF11P52732 1056 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 SBK1Q52WX2 424 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 BTBD8Q5XKL5 378 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 TATDN1Q6P1N9 297 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 RPTNQ6XPR3 784 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 RASAL3Q86YV0 1011 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 PASD1Q8IV76 773 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 TRIM48Q8IWZ4 208 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 EFHBQ8N7U6 833 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 COG1Q8WTW3 980 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 HOOK2Q96ED9 719 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 DYNLL2Q96FJ2 89 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 IRF2BPLQ9H1B7 796 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 PRO3102Q9H379 93 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 INCENPQ9NQS7 918 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 HCFC2Q9Y5Z7 792 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 ECM29Q5VYK3 1845 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 BDP1A6H8Y1 2624 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 TRPM7Q96QT4 1865 aa7.28□□□□□ -1.24
RTFDC1-209ENST00000487211 OR14I1A6ND48 311 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 HIP1O00291 1037 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 CTNND1O60716 968 aaKnown RBP7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 ULK1O75385 1050 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 HLA-DOAP06340 250 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 PTPN1P18031 435 aaKnown RBP7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 SHMT1P34896 483 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 ECE1P42892 770 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 EPHA5P54756 1037 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 PRR5P85299 388 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 KIF23Q02241 960 aaPredicted RBP7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 GRIN1Q05586 938 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 ITKQ08881 620 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 SEC23AQ15436 765 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 ALX1Q15699 326 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 KCNMB1Q16558 191 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 BMP2KLQ5H9B9 411 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 CBLL1Q75N03 491 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 SLC44A5Q8NCS7 719 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 ARRDC4Q8NCT1 418 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 CLEC4DQ8WXI8 215 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 OPTNQ96CV9 577 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 MTMR8Q96EF0 704 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 ELF4Q99607 663 aaPredicted RBP7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 BCAS3Q9H6U6 928 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 TOMM22Q9NS69 142 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 DIAPH3Q9NSV4 1193 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 KLHL14Q9P2G3 628 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 HERC5Q9UII4 1024 aaKnown RBP7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 SERPINB13Q9UIV8 391 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 SPO11Q9Y5K1 396 aa7.27□□□□□ -1.25
RTFDC1-209ENST00000487211 COL2A1P02458 1487 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms