RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CCDC138Q96M89 665 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 LRRC37BQ96QE4 947 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 LMF1Q96S06 567 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 SEC61A2Q9H9S3 476 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 KIAA1586Q9HCI6 787 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 SLAMF7Q9NQ25 335 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 CORO2BQ9UQ03 480 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 SNX13Q9Y5W8 968 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 MYO1FO00160 1098 aa6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 MATN4O95460 622 aa6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 MTHFD1P11586 935 aaKnown RBP6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 PHKA1P46020 1223 aa6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 PIK3CGP48736 1102 aa6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 SUMO3P55854 103 aaPredicted RBP6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 SOX8P57073 446 aa6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 FMO1Q01740 532 aa6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 ZNF529Q6P280 563 aa6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 XRRA1Q6P2D8 792 aa6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 UBE3BQ7Z3V4 1068 aa6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 PLEKHH3Q7Z736 793 aa6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 PGBD4Q96DM1 585 aa6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 TMEM176AQ96HP8 235 aa6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 NDC1Q9BTX1 674 aa6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 BTBD1Q9H0C5 482 aa6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 RSAD1Q9HA92 442 aa6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 ZNF287Q9HBT7 754 aa6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 USP40Q9NVE5 1235 aa6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 GNL3LQ9NVN8 582 aaKnown RBP6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 PIH1D1Q9NWS0 290 aaKnown RBP6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 SIDT1Q9NXL6 827 aaKnown RBP6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 CPNE7Q9UBL6 633 aa6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 DMTF1Q9Y222 760 aa6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 PNPLA7Q6ZV29 1317 aa6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 ADAMTS20P59510 1910 aa6.13□□□□□ -1.43
PRPF38A-203ENST00000487160 PRSS29PA6NIE9 313 aa6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 TBKBP1A7MCY6 615 aa6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 TBX3O15119 743 aa6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 KPNA5O15131 536 aa6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 PJA2O43164 708 aa6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 EIF3JO75822 258 aaKnown RBP6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 SNRPA1P09661 255 aaKnown RBP6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 BRAFP15056 766 aa6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 ZKSCAN1P17029 563 aaPredicted RBP6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 CLRN1P58418 232 aa6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 RAP2BP61225 183 aa6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 EXOSC9Q06265 439 aaKnown RBP6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 CNGA2Q16280 664 aa6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 CCDC93Q567U6 631 aa6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 TAX1BP1Q86VP1 789 aa6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 BORCS6Q96GS4 357 aa6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 SGCZQ96LD1 299 aa6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 ZNF512Q96ME7 567 aaPredicted RBP6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 FMNL2Q96PY5 1086 aa6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 P2RX7Q99572 595 aaKnown RBP6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 PLA2G12BQ9BX93 195 aa6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 NELFAQ9H3P2 528 aa6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 OGDHLQ9ULD0 1010 aa6.12□□□□□ -1.43
PRPF38A-203ENST00000487160 ISM1B1AKI9 464 aa6.11□□□□□ -1.43
PRPF38A-203ENST00000487160 B5MCH6 92 aa6.11□□□□□ -1.43
PRPF38A-203ENST00000487160 SLC43A1O75387 559 aa6.11□□□□□ -1.43
PRPF38A-203ENST00000487160 CFPP27918 469 aa6.11□□□□□ -1.43
PRPF38A-203ENST00000487160 SLC6A4P31645 630 aa6.11□□□□□ -1.43
PRPF38A-203ENST00000487160 CASP5P51878 434 aa6.11□□□□□ -1.43
PRPF38A-203ENST00000487160 EPHB4P54760 987 aa6.11□□□□□ -1.43
PRPF38A-203ENST00000487160 NOMO3P69849 1222 aa6.11□□□□□ -1.43
PRPF38A-203ENST00000487160 DUSP8Q13202 625 aa6.11□□□□□ -1.43
PRPF38A-203ENST00000487160 BMT2Q1RMZ1 405 aa6.11□□□□□ -1.43
PRPF38A-203ENST00000487160 LONRF3Q496Y0 759 aa6.11□□□□□ -1.43
PRPF38A-203ENST00000487160 FKBP15Q5T1M5 1219 aa6.11□□□□□ -1.43
PRPF38A-203ENST00000487160 ACRBPQ8NEB7 543 aa6.11□□□□□ -1.43
PRPF38A-203ENST00000487160 VPS37AQ8NEZ2 397 aa6.11□□□□□ -1.43
PRPF38A-203ENST00000487160 RIPOR3Q96MK2 946 aa6.11□□□□□ -1.43
PRPF38A-203ENST00000487160 GNRHR2Q96P88 292 aa6.11□□□□□ -1.43
PRPF38A-203ENST00000487160 LSM14BQ9BX40 385 aaKnown RBP6.11□□□□□ -1.43
PRPF38A-203ENST00000487160 PACSIN1Q9BY11 444 aa6.11□□□□□ -1.43
PRPF38A-203ENST00000487160 PLCB1Q9NQ66 1216 aa6.11□□□□□ -1.43
PRPF38A-203ENST00000487160 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.11□□□□□ -1.43
PRPF38A-203ENST00000487160 DUSP10Q9Y6W6 482 aa6.11□□□□□ -1.43
PRPF38A-203ENST00000487160 BAZ1BQ9UIG0 1483 aaKnown RBP6.1□□□□□ -1.43
PRPF38A-203ENST00000487160 RASA4BC9J798 803 aa6.1□□□□□ -1.43
PRPF38A-203ENST00000487160 RASA4O43374 803 aa6.1□□□□□ -1.43
PRPF38A-203ENST00000487160 TRIM13O60858 407 aa6.1□□□□□ -1.43
PRPF38A-203ENST00000487160 POMCP01189 267 aa6.1□□□□□ -1.43
PRPF38A-203ENST00000487160 AMHP03971 560 aa6.1□□□□□ -1.43
PRPF38A-203ENST00000487160 C8AP07357 584 aa6.1□□□□□ -1.43
PRPF38A-203ENST00000487160 GNAI3P08754 354 aa6.1□□□□□ -1.43
PRPF38A-203ENST00000487160 RPL17P18621 184 aaKnown RBP6.1□□□□□ -1.43
PRPF38A-203ENST00000487160 EN2P19622 333 aaPredicted RBP6.1□□□□□ -1.43
PRPF38A-203ENST00000487160 KCNJ5P48544 419 aa6.1□□□□□ -1.43
PRPF38A-203ENST00000487160 GNAI1P63096 354 aa6.1□□□□□ -1.43
PRPF38A-203ENST00000487160 ZNF543Q08ER8 600 aa6.1□□□□□ -1.43
PRPF38A-203ENST00000487160 GRM7Q14831 915 aa6.1□□□□□ -1.43
PRPF38A-203ENST00000487160 UBXN2BQ14CS0 331 aa6.1□□□□□ -1.43
PRPF38A-203ENST00000487160 SURF1Q15526 300 aa6.1□□□□□ -1.43
PRPF38A-203ENST00000487160 CSRP2Q16527 193 aa6.1□□□□□ -1.43
PRPF38A-203ENST00000487160 SESTD1Q86VW0 696 aa6.1□□□□□ -1.43
PRPF38A-203ENST00000487160 SP8Q8IXZ3 490 aa6.1□□□□□ -1.43
PRPF38A-203ENST00000487160 LRRC56Q8IYG6 542 aaPredicted RBP6.1□□□□□ -1.43
PRPF38A-203ENST00000487160 TOX2Q96NM4 488 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms