RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 C1RP00736 705 aa15.86■□□□□ 0.13
LIMS3-205ENST00000487150 IRS1P35568 1242 aa15.86■□□□□ 0.13
LIMS3-205ENST00000487150 PNPLA4P41247 253 aa15.86■□□□□ 0.13
LIMS3-205ENST00000487150 ERVFC1P60507 584 aa15.86■□□□□ 0.13
LIMS3-205ENST00000487150 DSG1Q02413 1049 aa15.86■□□□□ 0.13
LIMS3-205ENST00000487150 PTPN14Q15678 1187 aa15.86■□□□□ 0.13
LIMS3-205ENST00000487150 CCDC85BQ15834 202 aaPredicted RBP15.86■□□□□ 0.13
LIMS3-205ENST00000487150 ZBTB6Q15916 424 aa15.86■□□□□ 0.13
LIMS3-205ENST00000487150 EDRF1Q3B7T1 1238 aa15.86■□□□□ 0.13
LIMS3-205ENST00000487150 CRELD2Q6UXH1 353 aaPredicted RBP15.86■□□□□ 0.13
LIMS3-205ENST00000487150 EFHBQ8N7U6 833 aa15.86■□□□□ 0.13
LIMS3-205ENST00000487150 PPM1EQ8WY54 764 aa15.86■□□□□ 0.13
LIMS3-205ENST00000487150 HLA-CQ95604 372 aa15.86■□□□□ 0.13
LIMS3-205ENST00000487150 PABPC5Q96DU9 382 aaKnown RBP15.86■□□□□ 0.13
LIMS3-205ENST00000487150 ANKRD36BP1Q96IX9 119 aa15.86■□□□□ 0.13
LIMS3-205ENST00000487150 ZNF560Q96MR9 790 aa15.86■□□□□ 0.13
LIMS3-205ENST00000487150 TTPALQ9BTX7 342 aa15.86■□□□□ 0.13
LIMS3-205ENST00000487150 KCTD10Q9H3F6 313 aa15.86■□□□□ 0.13
LIMS3-205ENST00000487150 TUBGCP4Q9UGJ1 667 aa15.86■□□□□ 0.13
LIMS3-205ENST00000487150 ITGA11Q9UKX5 1188 aa15.86■□□□□ 0.13
LIMS3-205ENST00000487150 C2orf71A6NGG8 1288 aa15.85■□□□□ 0.13
LIMS3-205ENST00000487150 CXCL14O95715 111 aa15.85■□□□□ 0.13
LIMS3-205ENST00000487150 TNNC2P02585 160 aa15.85■□□□□ 0.13
LIMS3-205ENST00000487150 NR3C1P04150 777 aa15.85■□□□□ 0.13
LIMS3-205ENST00000487150 ADH1AP07327 375 aa15.85■□□□□ 0.13
LIMS3-205ENST00000487150 NFICP08651 508 aa15.85■□□□□ 0.13
LIMS3-205ENST00000487150 TMEM191BP0C7N4 346 aa15.85■□□□□ 0.13
LIMS3-205ENST00000487150 AP3M2P53677 418 aa15.85■□□□□ 0.13
LIMS3-205ENST00000487150 LRRC63Q05C16 580 aa15.85■□□□□ 0.13
LIMS3-205ENST00000487150 SOX4Q06945 474 aaPredicted RBP15.85■□□□□ 0.13
LIMS3-205ENST00000487150 COL19A1Q14993 1142 aa15.85■□□□□ 0.13
LIMS3-205ENST00000487150 DUSP6Q16828 381 aa15.85■□□□□ 0.13
LIMS3-205ENST00000487150 ANKS3Q6ZW76 656 aa15.85■□□□□ 0.13
LIMS3-205ENST00000487150 WDR49Q8IV35 697 aa15.85■□□□□ 0.13
LIMS3-205ENST00000487150 APPL2Q8NEU8 664 aa15.85■□□□□ 0.13
LIMS3-205ENST00000487150 C18orf25Q96B23 403 aaPredicted RBP15.85■□□□□ 0.13
LIMS3-205ENST00000487150 OXCT2Q9BYC2 517 aaPredicted RBP15.85■□□□□ 0.13
LIMS3-205ENST00000487150 IKZF4Q9H2S9 585 aa15.85■□□□□ 0.13
LIMS3-205ENST00000487150 CHST7Q9NS84 486 aa15.85■□□□□ 0.13
LIMS3-205ENST00000487150 FAM50BQ9Y247 325 aa15.85■□□□□ 0.13
LIMS3-205ENST00000487150 GOLGA8IPA6NC78 632 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 GOLGA8JA6NMD2 632 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 CLIC2O15247 247 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 MAPK13O15264 365 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 MEFVO15553 781 aaPredicted RBP15.84■□□□□ 0.13
LIMS3-205ENST00000487150 EFEMP2O95967 443 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 NR2F2P24468 414 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 MCM4P33991 863 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 NRIP1P48552 1158 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 TFAMQ00059 246 aaKnown RBP15.84■□□□□ 0.13
LIMS3-205ENST00000487150 ENPEPQ07075 957 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 HYAL1Q12794 435 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 PSMD6Q15008 389 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 DUOXA2Q1HG44 320 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 FAM171A1Q5VUB5 890 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 FOXR2Q6PJQ5 311 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 CBWD2Q8IUF1 395 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 HASPINQ8TF76 798 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 ATXN2LQ8WWM7 1075 aaKnown RBP15.84■□□□□ 0.13
LIMS3-205ENST00000487150 PIK3R5Q8WYR1 880 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 CASP10Q92851 521 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 SUSD3Q96L08 255 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 PAAF1Q9BRP4 392 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 GPR62Q9BZJ7 368 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 NUP62CLQ9H1M0 184 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 CLSTN2Q9H4D0 955 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 GOLGA2P5Q9HBQ8 144 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 FNIP2Q9P278 1114 aa15.84■□□□□ 0.13
LIMS3-205ENST00000487150 KIAA1671Q9BY89 1806 aa15.83■□□□□ 0.12
LIMS3-205ENST00000487150 BICDL2A1A5D9 508 aa15.83■□□□□ 0.12
LIMS3-205ENST00000487150 H7C4K7 107 aa15.83■□□□□ 0.12
LIMS3-205ENST00000487150 PTMSP20962 102 aa15.83■□□□□ 0.12
LIMS3-205ENST00000487150 NDUFV1P49821 464 aa15.83■□□□□ 0.12
LIMS3-205ENST00000487150 SPAG1Q07617 926 aa15.83■□□□□ 0.12
LIMS3-205ENST00000487150 CYP24A1Q07973 514 aa15.83■□□□□ 0.12
LIMS3-205ENST00000487150 PUS10Q3MIT2 529 aaKnown RBP15.83■□□□□ 0.12
LIMS3-205ENST00000487150 SV2CQ496J9 727 aa15.83■□□□□ 0.12
LIMS3-205ENST00000487150 LRRC52Q8N7C0 313 aa15.83■□□□□ 0.12
LIMS3-205ENST00000487150 RIN2Q8WYP3 895 aaPredicted RBP15.83■□□□□ 0.12
LIMS3-205ENST00000487150 DHTKD1Q96HY7 919 aaPredicted RBP15.83■□□□□ 0.12
LIMS3-205ENST00000487150 MKNK1Q9BUB5 465 aa15.83■□□□□ 0.12
LIMS3-205ENST00000487150 VN1R3Q9BXE9 311 aa15.83■□□□□ 0.12
LIMS3-205ENST00000487150 CXCL16Q9H2A7 254 aa15.83■□□□□ 0.12
LIMS3-205ENST00000487150 UBE2ZQ9H832 354 aaPredicted RBP15.83■□□□□ 0.12
LIMS3-205ENST00000487150 RXFP1Q9HBX9 757 aa15.83■□□□□ 0.12
LIMS3-205ENST00000487150 PDE11AQ9HCR9 933 aa15.83■□□□□ 0.12
LIMS3-205ENST00000487150 LMBRD1Q9NUN5 540 aa15.83■□□□□ 0.12
LIMS3-205ENST00000487150 DZANK1Q9NVP4 752 aa15.83■□□□□ 0.12
LIMS3-205ENST00000487150 DMAC2Q9NW81 257 aa15.83■□□□□ 0.12
LIMS3-205ENST00000487150 DPP3Q9NY33 737 aa15.83■□□□□ 0.12
LIMS3-205ENST00000487150 KIAA1468Q9P260 1216 aa15.83■□□□□ 0.12
LIMS3-205ENST00000487150 MAN1B1Q9UKM7 699 aa15.83■□□□□ 0.12
LIMS3-205ENST00000487150 DSEQ9UL01 958 aa15.83■□□□□ 0.12
LIMS3-205ENST00000487150 ANO9A1A5B4 782 aa15.82■□□□□ 0.12
LIMS3-205ENST00000487150 HIDE1A8MVS5 230 aa15.82■□□□□ 0.12
LIMS3-205ENST00000487150 TULP1O00294 542 aaPredicted RBP15.82■□□□□ 0.12
LIMS3-205ENST00000487150 ODC1P11926 461 aa15.82■□□□□ 0.12
LIMS3-205ENST00000487150 KRT13P13646 458 aa15.82■□□□□ 0.12
LIMS3-205ENST00000487150 FGFR3P22607 806 aa15.82■□□□□ 0.12
LIMS3-205ENST00000487150 AARSP49588 968 aaKnown RBP eCLIP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms