RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 BRCC3P46736 316 aa16.46■□□□□ 0.23
PFDN4-204ENST00000487129 FNTBP49356 437 aa16.46■□□□□ 0.23
PFDN4-204ENST00000487129 SIM2Q14190 667 aaPredicted RBP16.46■□□□□ 0.23
PFDN4-204ENST00000487129 UPP1Q16831 310 aa16.46■□□□□ 0.23
PFDN4-204ENST00000487129 GLRA4Q5JXX5 417 aa16.46■□□□□ 0.23
PFDN4-204ENST00000487129 SLFN12Q8IYM2 578 aa16.46■□□□□ 0.23
PFDN4-204ENST00000487129 PIGOQ8TEQ8 1089 aa16.46■□□□□ 0.23
PFDN4-204ENST00000487129 BSNDQ8WZ55 320 aa16.46■□□□□ 0.23
PFDN4-204ENST00000487129 IRF7Q92985 503 aa16.46■□□□□ 0.23
PFDN4-204ENST00000487129 CORO1BQ9BR76 489 aa16.46■□□□□ 0.23
PFDN4-204ENST00000487129 LARP6Q9BRS8 491 aaKnown RBP16.46■□□□□ 0.23
PFDN4-204ENST00000487129 GOLGA2P5Q9HBQ8 144 aa16.46■□□□□ 0.23
PFDN4-204ENST00000487129 ATRXP46100 2492 aa16.45■□□□□ 0.22
PFDN4-204ENST00000487129 FAM208BQ5VWN6 2430 aa16.45■□□□□ 0.22
PFDN4-204ENST00000487129 WNT7AO00755 349 aa16.45■□□□□ 0.22
PFDN4-204ENST00000487129 N4BP3O15049 544 aa16.45■□□□□ 0.22
PFDN4-204ENST00000487129 PSMC3P17980 439 aa16.45■□□□□ 0.22
PFDN4-204ENST00000487129 GDI1P31150 447 aa16.45■□□□□ 0.22
PFDN4-204ENST00000487129 CXCL12P48061 93 aa16.45■□□□□ 0.22
PFDN4-204ENST00000487129 SHC2P98077 582 aa16.45■□□□□ 0.22
PFDN4-204ENST00000487129 SOX4Q06945 474 aaPredicted RBP16.45■□□□□ 0.22
PFDN4-204ENST00000487129 PTGDRQ13258 359 aa16.45■□□□□ 0.22
PFDN4-204ENST00000487129 PPP2R5DQ14738 602 aa16.45■□□□□ 0.22
PFDN4-204ENST00000487129 ANKS3Q6ZW76 656 aa16.45■□□□□ 0.22
PFDN4-204ENST00000487129 TNFRSF25Q93038 417 aa16.45■□□□□ 0.22
PFDN4-204ENST00000487129 ZNF274Q96GC6 653 aaPredicted RBP16.45■□□□□ 0.22
PFDN4-204ENST00000487129 CHAMP1Q96JM3 812 aa16.45■□□□□ 0.22
PFDN4-204ENST00000487129 RXFP3Q9NSD7 469 aa16.45■□□□□ 0.22
PFDN4-204ENST00000487129 ANGPTL2Q9UKU9 493 aa16.45■□□□□ 0.22
PFDN4-204ENST00000487129 ZZEF1O43149 2961 aa16.45■□□□□ 0.22
PFDN4-204ENST00000487129 SPEGQ15772 3267 aa16.44■□□□□ 0.22
PFDN4-204ENST00000487129 DTNBO60941 627 aa16.44■□□□□ 0.22
PFDN4-204ENST00000487129 ATF2P15336 505 aa16.44■□□□□ 0.22
PFDN4-204ENST00000487129 CCNE1P24864 410 aa16.44■□□□□ 0.22
PFDN4-204ENST00000487129 VIPR2P41587 438 aa16.44■□□□□ 0.22
PFDN4-204ENST00000487129 N4BP2L1Q5TBK1 243 aaPredicted RBP16.44■□□□□ 0.22
PFDN4-204ENST00000487129 Q6ZS52 159 aa16.44■□□□□ 0.22
PFDN4-204ENST00000487129 MAEAQ7L5Y9 396 aa16.44■□□□□ 0.22
PFDN4-204ENST00000487129 TCEAL8Q8IYN2 117 aa16.44■□□□□ 0.22
PFDN4-204ENST00000487129 SPEM1Q8N4L4 309 aa16.44■□□□□ 0.22
PFDN4-204ENST00000487129 SMARCD2Q92925 531 aa16.44■□□□□ 0.22
PFDN4-204ENST00000487129 RSPRY1Q96DX4 576 aa16.44■□□□□ 0.22
PFDN4-204ENST00000487129 TRPV4Q9HBA0 871 aa16.44■□□□□ 0.22
PFDN4-204ENST00000487129 ZSWIM6Q9HCJ5 1215 aa16.44■□□□□ 0.22
PFDN4-204ENST00000487129 RBM12Q9NTZ6 932 aaKnown RBP16.44■□□□□ 0.22
PFDN4-204ENST00000487129 GDAQ9Y2T3 454 aa16.44■□□□□ 0.22
PFDN4-204ENST00000487129 INSL5Q9Y5Q6 135 aa16.44■□□□□ 0.22
PFDN4-204ENST00000487129 CPLX1O14810 134 aa16.43■□□□□ 0.22
PFDN4-204ENST00000487129 LRG1P02750 347 aa16.43■□□□□ 0.22
PFDN4-204ENST00000487129 SPATA31C1P0DKV0 1188 aa16.43■□□□□ 0.22
PFDN4-204ENST00000487129 PSMA5P28066 241 aa16.43■□□□□ 0.22
PFDN4-204ENST00000487129 LIMK1P53667 647 aa16.43■□□□□ 0.22
PFDN4-204ENST00000487129 EPHA5P54756 1037 aa16.43■□□□□ 0.22
PFDN4-204ENST00000487129 PRPF4BQ13523 1007 aaKnown RBP16.43■□□□□ 0.22
PFDN4-204ENST00000487129 MRPL58Q14197 206 aaKnown RBP16.43■□□□□ 0.22
PFDN4-204ENST00000487129 RUFY3Q7L099 469 aa16.43■□□□□ 0.22
PFDN4-204ENST00000487129 CENPQQ7L2Z9 268 aaPredicted RBP16.43■□□□□ 0.22
PFDN4-204ENST00000487129 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.43■□□□□ 0.22
PFDN4-204ENST00000487129 LONP2Q86WA8 852 aa16.43■□□□□ 0.22
PFDN4-204ENST00000487129 HS6ST3Q8IZP7 471 aa16.43■□□□□ 0.22
PFDN4-204ENST00000487129 FAM160A2Q8N612 972 aaPredicted RBP16.43■□□□□ 0.22
PFDN4-204ENST00000487129 DEPDC1BQ8WUY9 529 aa16.43■□□□□ 0.22
PFDN4-204ENST00000487129 NAP1L4Q99733 375 aaKnown RBP16.43■□□□□ 0.22
PFDN4-204ENST00000487129 CEP72Q9P209 647 aa16.43■□□□□ 0.22
PFDN4-204ENST00000487129 ACKR2O00590 384 aa16.42■□□□□ 0.22
PFDN4-204ENST00000487129 ZNF197O14709 1029 aa16.42■□□□□ 0.22
PFDN4-204ENST00000487129 PRKCBP05771 671 aa16.42■□□□□ 0.22
PFDN4-204ENST00000487129 XRCC6P12956 609 aaKnown RBP eCLIP16.42■□□□□ 0.22
PFDN4-204ENST00000487129 GJA1P17302 382 aa16.42■□□□□ 0.22
PFDN4-204ENST00000487129 CNR2P34972 360 aa16.42■□□□□ 0.22
PFDN4-204ENST00000487129 MLLT6P55198 1093 aaPredicted RBP16.42■□□□□ 0.22
PFDN4-204ENST00000487129 STK3Q13188 491 aa16.42■□□□□ 0.22
PFDN4-204ENST00000487129 NR5A1Q13285 461 aa16.42■□□□□ 0.22
PFDN4-204ENST00000487129 XKR4Q5GH76 650 aa16.42■□□□□ 0.22
PFDN4-204ENST00000487129 TXNDC11Q6PKC3 985 aa16.42■□□□□ 0.22
PFDN4-204ENST00000487129 ZBTB8OSQ8IWT0 167 aa16.42■□□□□ 0.22
PFDN4-204ENST00000487129 DDX1Q92499 740 aaKnown RBP16.42■□□□□ 0.22
PFDN4-204ENST00000487129 PCDHA12Q9UN75 941 aa16.42■□□□□ 0.22
PFDN4-204ENST00000487129 SMIM28A0A1B0GU29 152 aa16.41■□□□□ 0.22
PFDN4-204ENST00000487129 PRRG1O14668 218 aa16.41■□□□□ 0.22
PFDN4-204ENST00000487129 MARCH6O60337 910 aa16.41■□□□□ 0.22
PFDN4-204ENST00000487129 BAG4O95429 457 aaKnown RBP16.41■□□□□ 0.22
PFDN4-204ENST00000487129 HOXA6P31267 233 aa16.41■□□□□ 0.22
PFDN4-204ENST00000487129 SOX9P48436 509 aa16.41■□□□□ 0.22
PFDN4-204ENST00000487129 SF3A2Q15428 464 aaKnown RBP16.41■□□□□ 0.22
PFDN4-204ENST00000487129 MAPK6Q16659 721 aa16.41■□□□□ 0.22
PFDN4-204ENST00000487129 NT5DC1Q5TFE4 455 aa16.41■□□□□ 0.22
PFDN4-204ENST00000487129 ALKAL1Q6UXT8 129 aa16.41■□□□□ 0.22
PFDN4-204ENST00000487129 PDZD4Q76G19 769 aaPredicted RBP16.41■□□□□ 0.22
PFDN4-204ENST00000487129 MFSD6LQ8IWD5 586 aa16.41■□□□□ 0.22
PFDN4-204ENST00000487129 MCPH1Q8NEM0 835 aa16.41■□□□□ 0.22
PFDN4-204ENST00000487129 ZSCAN18Q8TBC5 510 aaPredicted RBP16.41■□□□□ 0.22
PFDN4-204ENST00000487129 UROC1Q96N76 676 aa16.41■□□□□ 0.22
PFDN4-204ENST00000487129 MTMR9Q96QG7 549 aa16.41■□□□□ 0.22
PFDN4-204ENST00000487129 C2orf40Q9H1Z8 148 aa16.41■□□□□ 0.22
PFDN4-204ENST00000487129 TTC12Q9H892 705 aaPredicted RBP16.41■□□□□ 0.22
PFDN4-204ENST00000487129 CYP4F11Q9HBI6 524 aa16.41■□□□□ 0.22
PFDN4-204ENST00000487129 FBXL5Q9UKA1 691 aa16.41■□□□□ 0.22
PFDN4-204ENST00000487129 STK36Q9NRP7 1315 aa16.41■□□□□ 0.22
PFDN4-204ENST00000487129 ZFYVE26Q68DK2 2539 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms