RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 PGBD4Q96DM1 585 aa7.58□□□□□ -1.2
RTN4-214ENST00000486085 FAM89AQ96GI7 184 aa7.58□□□□□ -1.2
RTN4-214ENST00000486085 PNPOQ9NVS9 261 aa7.58□□□□□ -1.2
RTN4-214ENST00000486085 STAP2Q9UGK3 403 aa7.58□□□□□ -1.2
RTN4-214ENST00000486085 ZNF608Q9ULD9 1512 aaPredicted RBP7.57□□□□□ -1.2
RTN4-214ENST00000486085 NT5C1B-RDH14C9J2C7 533 aa7.57□□□□□ -1.2
RTN4-214ENST00000486085 K7ESM1 405 aa7.57□□□□□ -1.2
RTN4-214ENST00000486085 F2RL2O00254 374 aa7.57□□□□□ -1.2
RTN4-214ENST00000486085 CAND2O75155 1236 aa7.57□□□□□ -1.2
RTN4-214ENST00000486085 MTHFD1P11586 935 aaKnown RBP7.57□□□□□ -1.2
RTN4-214ENST00000486085 HIBADHP31937 336 aaKnown RBP7.57□□□□□ -1.2
RTN4-214ENST00000486085 NKX6-1P78426 367 aaPredicted RBP7.57□□□□□ -1.2
RTN4-214ENST00000486085 GALEQ14376 348 aa7.57□□□□□ -1.2
RTN4-214ENST00000486085 PLS1Q14651 629 aa7.57□□□□□ -1.2
RTN4-214ENST00000486085 UBXN2BQ14CS0 331 aa7.57□□□□□ -1.2
RTN4-214ENST00000486085 ERICH6BQ5W0A0 696 aa7.57□□□□□ -1.2
RTN4-214ENST00000486085 MAMDC4Q6UXC1 1216 aa7.57□□□□□ -1.2
RTN4-214ENST00000486085 KSR2Q6VAB6 950 aa7.57□□□□□ -1.2
RTN4-214ENST00000486085 CCAR1Q8IX12 1150 aaKnown RBP7.57□□□□□ -1.2
RTN4-214ENST00000486085 CHST13Q8NET6 341 aa7.57□□□□□ -1.2
RTN4-214ENST00000486085 OR52N2Q8NGI0 321 aa7.57□□□□□ -1.2
RTN4-214ENST00000486085 SLC35A4Q96G79 324 aa7.57□□□□□ -1.2
RTN4-214ENST00000486085 PHACTR3Q96KR7 559 aa7.57□□□□□ -1.2
RTN4-214ENST00000486085 FAM167AQ96KS9 214 aa7.57□□□□□ -1.2
RTN4-214ENST00000486085 WWC2-AS2Q96NR7 200 aa7.57□□□□□ -1.2
RTN4-214ENST00000486085 NDC1Q9BTX1 674 aa7.57□□□□□ -1.2
RTN4-214ENST00000486085 C1orf43Q9BWL3 253 aa7.57□□□□□ -1.2
RTN4-214ENST00000486085 TMEM60Q9H2L4 133 aa7.57□□□□□ -1.2
RTN4-214ENST00000486085 CD248Q9HCU0 757 aa7.57□□□□□ -1.2
RTN4-214ENST00000486085 FEZ2Q9UHY8 353 aaPredicted RBP7.57□□□□□ -1.2
RTN4-214ENST00000486085 PCDHA1Q9Y5I3 950 aa7.57□□□□□ -1.2
RTN4-214ENST00000486085 AMHP03971 560 aa7.56□□□□□ -1.2
RTN4-214ENST00000486085 USP14P54578 494 aa7.56□□□□□ -1.2
RTN4-214ENST00000486085 ANO6Q4KMQ2 910 aa7.56□□□□□ -1.2
RTN4-214ENST00000486085 DACT2Q5SW24 774 aa7.56□□□□□ -1.2
RTN4-214ENST00000486085 ZNF585AQ6P3V2 769 aa7.56□□□□□ -1.2
RTN4-214ENST00000486085 CCDC149Q6ZUS6 474 aa7.56□□□□□ -1.2
RTN4-214ENST00000486085 CHST15Q7LFX5 561 aaPredicted RBP7.56□□□□□ -1.2
RTN4-214ENST00000486085 COL23A1Q86Y22 540 aaPredicted RBP7.56□□□□□ -1.2
RTN4-214ENST00000486085 FAM156AQ8NDB6 213 aa7.56□□□□□ -1.2
RTN4-214ENST00000486085 NT5C1BQ96P26 610 aa7.56□□□□□ -1.2
RTN4-214ENST00000486085 GSTO2Q9H4Y5 243 aa7.56□□□□□ -1.2
RTN4-214ENST00000486085 WDCPQ9H6R7 721 aa7.56□□□□□ -1.2
RTN4-214ENST00000486085 FBXO34Q9NWN3 711 aa7.56□□□□□ -1.2
RTN4-214ENST00000486085 RAPGEFL1Q9UHV5 662 aa7.56□□□□□ -1.2
RTN4-214ENST00000486085 CLCA2Q9UQC9 943 aa7.56□□□□□ -1.2
RTN4-214ENST00000486085 FHAD1B1AJZ9 1412 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 PBRM1Q86U86 1689 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 A0A088AWK7 358 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.55□□□□□ -1.2
RTN4-214ENST00000486085 FAM227AF5H4B4 570 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 TPP1O14773 563 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 KRT18P05783 430 aaKnown RBP7.55□□□□□ -1.2
RTN4-214ENST00000486085 PRDX5P30044 214 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 AGFG1P52594 562 aaKnown RBP7.55□□□□□ -1.2
RTN4-214ENST00000486085 RAB1AP62820 205 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 FGL2Q14314 439 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 VPS72Q15906 364 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 Q6ZRM9 215 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 SRGAP1Q7Z6B7 1085 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 KIAA0319LQ8IZA0 1049 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 IL17RDQ8NFM7 739 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 OR10H5Q8NGA6 315 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 MTFMTQ96DP5 389 aaKnown RBP7.55□□□□□ -1.2
RTN4-214ENST00000486085 ADOQ96SZ5 270 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 MNTQ99583 582 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 PACSIN1Q9BY11 444 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 GPR87Q9BY21 358 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 SLAMF7Q9NQ25 335 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 CPA4Q9UI42 421 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 JAG2Q9Y219 1238 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 TCAF1Q9Y4C2 921 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 KIF21BO75037 1637 aa7.55□□□□□ -1.2
RTN4-214ENST00000486085 ADAMTS12P58397 1594 aa7.54□□□□□ -1.2
RTN4-214ENST00000486085 KRTAP9-6A0A140TA67 174 aa7.54□□□□□ -1.2
RTN4-214ENST00000486085 CAPN8A6NHC0 703 aa7.54□□□□□ -1.2
RTN4-214ENST00000486085 FTH1P19P0C7X4 201 aa7.54□□□□□ -1.2
RTN4-214ENST00000486085 SLC6A2P23975 617 aa7.54□□□□□ -1.2
RTN4-214ENST00000486085 SLC6A4P31645 630 aa7.54□□□□□ -1.2
RTN4-214ENST00000486085 RABGGTBP53611 331 aa7.54□□□□□ -1.2
RTN4-214ENST00000486085 HLTFQ14527 1009 aaKnown RBP eCLIP7.54□□□□□ -1.2
RTN4-214ENST00000486085 METTL24Q5JXM2 366 aa7.54□□□□□ -1.2
RTN4-214ENST00000486085 C1QL3Q5VWW1 255 aa7.54□□□□□ -1.2
RTN4-214ENST00000486085 DRICH1Q6PGQ1 229 aaPredicted RBP7.54□□□□□ -1.2
RTN4-214ENST00000486085 MED25Q71SY5 747 aa7.54□□□□□ -1.2
RTN4-214ENST00000486085 PPP1R3BQ86XI6 285 aa7.54□□□□□ -1.2
RTN4-214ENST00000486085 NLGN4YQ8NFZ3 816 aaPredicted RBP7.54□□□□□ -1.2
RTN4-214ENST00000486085 GNL3LQ9NVN8 582 aaKnown RBP7.54□□□□□ -1.2
RTN4-214ENST00000486085 FAM50BQ9Y247 325 aa7.54□□□□□ -1.2
RTN4-214ENST00000486085 TDRD9Q8NDG6 1382 aaKnown RBP7.54□□□□□ -1.2
RTN4-214ENST00000486085 AQRO60306 1485 aaKnown RBP eCLIP7.54□□□□□ -1.27e-8■■■■■ 28.3
RTN4-214ENST00000486085 DRGXA6NNA5 263 aa7.53□□□□□ -1.2
RTN4-214ENST00000486085 CYP27B1O15528 508 aa7.53□□□□□ -1.2
RTN4-214ENST00000486085 FOXD2O60548 495 aaPredicted RBP7.53□□□□□ -1.2
RTN4-214ENST00000486085 ZBED1O96006 694 aa7.53□□□□□ -1.2
RTN4-214ENST00000486085 ALAS1P13196 640 aa7.53□□□□□ -1.2
RTN4-214ENST00000486085 PHKA1P46020 1223 aa7.53□□□□□ -1.2
RTN4-214ENST00000486085 SCNN1GP51170 649 aa7.53□□□□□ -1.2
RTN4-214ENST00000486085 CHN2P52757 468 aa7.53□□□□□ -1.2
RTN4-214ENST00000486085 CNN3Q15417 329 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms