RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 CLIC2O15247 247 aa28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 EXTL3O43909 919 aa28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 BRCC3P46736 316 aa28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 DSG1Q02413 1049 aa28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 KNOP1Q1ED39 458 aaKnown RBP28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 KIAA0319Q5VV43 1072 aa28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 LLGL2Q6P1M3 1020 aa28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 CD302Q8IX05 232 aa28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 ATXN2LQ8WWM7 1075 aaKnown RBP28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 DDX27Q96GQ7 796 aaKnown RBP28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 HSPBP1Q9NZL4 362 aa28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 I3L4J1 428 aa28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 CLASP2O75122 1294 aaKnown RBP28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 LDHAP00338 332 aaKnown RBP28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 NDUFV1P49821 464 aa28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 KCNQ1P51787 676 aa28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 USP41Q3LFD5 358 aa28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 RTP2Q5QGT7 225 aa28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 FAM171A1Q5VUB5 890 aa28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 BRSK2Q8IWQ3 736 aa28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 EFCAB13Q8IY85 973 aa28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 GPD1LQ8N335 351 aa28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 CCDC47Q96A33 483 aaKnown RBP28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 CCDC34Q96HJ3 373 aa28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 TIGD1Q96MW7 591 aa28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 GBP4Q96PP9 640 aa28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 COL25A1Q9BXS0 654 aaPredicted RBP28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 ASB7Q9H672 318 aa28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 BARX2Q9UMQ3 279 aaPredicted RBP28.77■■■□□ 2.2
GTF3C4-202ENST00000483873 CNPP09543 421 aaKnown RBP28.76■■■□□ 2.19
GTF3C4-202ENST00000483873 RPL9P32969 192 aaKnown RBP28.76■■■□□ 2.19
GTF3C4-202ENST00000483873 MRPS5P82675 430 aaKnown RBP28.76■■■□□ 2.19
GTF3C4-202ENST00000483873 KCNC3Q14003 757 aa28.76■■■□□ 2.19
GTF3C4-202ENST00000483873 KCNB1Q14721 858 aa28.76■■■□□ 2.19
GTF3C4-202ENST00000483873 TMEM132DQ14C87 1099 aa28.76■■■□□ 2.19
GTF3C4-202ENST00000483873 CLUL1Q15846 466 aa28.76■■■□□ 2.19
GTF3C4-202ENST00000483873 KIAA1841Q6NSI8 718 aa28.76■■■□□ 2.19
GTF3C4-202ENST00000483873 KLHL5Q96PQ7 755 aa28.76■■■□□ 2.19
GTF3C4-202ENST00000483873 RBAKQ9NYW8 714 aaPredicted RBP28.76■■■□□ 2.19
GTF3C4-202ENST00000483873 CLEC1BQ9P126 229 aa28.76■■■□□ 2.19
GTF3C4-202ENST00000483873 TULP1O00294 542 aaPredicted RBP28.75■■■□□ 2.19
GTF3C4-202ENST00000483873 CYP3A5P20815 502 aa28.75■■■□□ 2.19
GTF3C4-202ENST00000483873 POU5F1Q01860 360 aaKnown RBP28.75■■■□□ 2.19
GTF3C4-202ENST00000483873 SPATA1Q5VX52 437 aa28.75■■■□□ 2.19
GTF3C4-202ENST00000483873 CEP57Q86XR8 500 aa28.75■■■□□ 2.19
GTF3C4-202ENST00000483873 CBWD2Q8IUF1 395 aa28.75■■■□□ 2.19
GTF3C4-202ENST00000483873 RIN2Q8WYP3 895 aaPredicted RBP28.75■■■□□ 2.19
GTF3C4-202ENST00000483873 ASB2Q96Q27 587 aa28.75■■■□□ 2.19
GTF3C4-202ENST00000483873 HCFC2Q9Y5Z7 792 aa28.75■■■□□ 2.19
GTF3C4-202ENST00000483873 SCN1AP35498 2009 aa28.74■■■□□ 2.19
GTF3C4-202ENST00000483873 PPEF2O14830 753 aa28.74■■■□□ 2.19
GTF3C4-202ENST00000483873 IL18RAPO95256 599 aa28.74■■■□□ 2.19
GTF3C4-202ENST00000483873 LRPAP1P30533 357 aa28.74■■■□□ 2.19
GTF3C4-202ENST00000483873 CYP2J2P51589 502 aa28.74■■■□□ 2.19
GTF3C4-202ENST00000483873 PRSS55Q6UWB4 352 aaPredicted RBP28.74■■■□□ 2.19
GTF3C4-202ENST00000483873 HS2ST1Q7LGA3 356 aa28.74■■■□□ 2.19
GTF3C4-202ENST00000483873 FAM84AQ96KN4 292 aa28.74■■■□□ 2.19
GTF3C4-202ENST00000483873 TSPAN18Q96SJ8 248 aa28.74■■■□□ 2.19
GTF3C4-202ENST00000483873 MAPK8IP1Q9UQF2 711 aa28.74■■■□□ 2.19
GTF3C4-202ENST00000483873 DERAQ9Y315 318 aa28.74■■■□□ 2.19
GTF3C4-202ENST00000483873 KIAA0391O15091 583 aaKnown RBP28.73■■■□□ 2.19
GTF3C4-202ENST00000483873 XPOTO43592 962 aaKnown RBP28.73■■■□□ 2.19
GTF3C4-202ENST00000483873 KINO60870 393 aaKnown RBP28.73■■■□□ 2.19
GTF3C4-202ENST00000483873 PRPF40AO75400 957 aaKnown RBP28.73■■■□□ 2.19
GTF3C4-202ENST00000483873 UBE2HP62256 183 aa28.73■■■□□ 2.19
GTF3C4-202ENST00000483873 ELAVL2Q12926 359 aaKnown RBP28.73■■■□□ 2.19
GTF3C4-202ENST00000483873 LEXMQ3ZCV2 418 aa28.73■■■□□ 2.19
GTF3C4-202ENST00000483873 BEST2Q8NFU1 509 aa28.73■■■□□ 2.19
GTF3C4-202ENST00000483873 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.73■■■□□ 2.19
GTF3C4-202ENST00000483873 TTPALQ9BTX7 342 aa28.73■■■□□ 2.19
GTF3C4-202ENST00000483873 EMILIN2Q9BXX0 1053 aa28.73■■■□□ 2.19
GTF3C4-202ENST00000483873 KCTD10Q9H3F6 313 aa28.73■■■□□ 2.19
GTF3C4-202ENST00000483873 SSX2IPQ9Y2D8 614 aa28.73■■■□□ 2.19
GTF3C4-202ENST00000483873 C2CD2Q9Y426 696 aa28.73■■■□□ 2.19
GTF3C4-202ENST00000483873 RPL17P18621 184 aaKnown RBP28.72■■■□□ 2.19
GTF3C4-202ENST00000483873 TKTP29401 623 aaKnown RBP28.72■■■□□ 2.19
GTF3C4-202ENST00000483873 SMYD4Q8IYR2 804 aaPredicted RBP28.72■■■□□ 2.19
GTF3C4-202ENST00000483873 MSLNLQ96KJ4 702 aa28.72■■■□□ 2.19
GTF3C4-202ENST00000483873 RXFP1Q9HBX9 757 aa28.72■■■□□ 2.19
GTF3C4-202ENST00000483873 PDE11AQ9HCR9 933 aa28.72■■■□□ 2.19
GTF3C4-202ENST00000483873 NUB1Q9Y5A7 615 aa28.72■■■□□ 2.19
GTF3C4-202ENST00000483873 PCDHA5Q9Y5H7 936 aa28.72■■■□□ 2.19
GTF3C4-202ENST00000483873 FSD2A1L4K1 749 aa28.71■■■□□ 2.19
GTF3C4-202ENST00000483873 TEX28O15482 410 aa28.71■■■□□ 2.19
GTF3C4-202ENST00000483873 EPCAMP16422 314 aa28.71■■■□□ 2.19
GTF3C4-202ENST00000483873 FGFR3P22607 806 aa28.71■■■□□ 2.19
GTF3C4-202ENST00000483873 SNRPFP62306 86 aaKnown RBP28.71■■■□□ 2.19
GTF3C4-202ENST00000483873 AAK1Q2M2I8 961 aa28.71■■■□□ 2.19
GTF3C4-202ENST00000483873 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.71■■■□□ 2.19
GTF3C4-202ENST00000483873 GLYCTKQ8IVS8 523 aa28.71■■■□□ 2.19
GTF3C4-202ENST00000483873 RDH13Q8NBN7 331 aa28.71■■■□□ 2.19
GTF3C4-202ENST00000483873 SLC22A17Q8WUG5 538 aa28.71■■■□□ 2.19
GTF3C4-202ENST00000483873 FBXL18Q96ME1 805 aa28.71■■■□□ 2.19
GTF3C4-202ENST00000483873 C5orf42Q9H799 3197 aa28.71■■■□□ 2.19
GTF3C4-202ENST00000483873 ZNF233A6NK53 670 aa28.7■■■□□ 2.19
GTF3C4-202ENST00000483873 KLRC2P26717 231 aa28.7■■■□□ 2.19
GTF3C4-202ENST00000483873 MCM4P33991 863 aa28.7■■■□□ 2.19
GTF3C4-202ENST00000483873 TMEM184AQ6ZMB5 413 aa28.7■■■□□ 2.19
GTF3C4-202ENST00000483873 C12orf56Q8IXR9 622 aa28.7■■■□□ 2.19
GTF3C4-202ENST00000483873 LNX1Q8TBB1 728 aaPredicted RBP28.7■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms