RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 TNRC18O15417 2968 aaPredicted RBP9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 A0A0A6YYK5 440 aaPredicted RBP9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 ANKRD62A6NC57 917 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 A6NJR5 290 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 TNPO2O14787 897 aaKnown RBP9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 MAGEB2O15479 319 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 ATMINO43313 823 aaPredicted RBP9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 ZC3H11AO75152 810 aaKnown RBP eCLIP9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 ZMYND10O75800 440 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 CXCL8P10145 99 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 TCP1P17987 556 aaKnown RBP9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 FGFR4P22455 802 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 VSNL1P62760 191 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 NCOA4Q13772 614 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 TFDP1Q14186 410 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 MSANTD4Q8NCY6 345 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 SPATA4Q8NEY3 305 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 HDAC7Q8WUI4 952 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 LMBR1Q8WVP7 490 aa9.5□□□□□ -0.89
CDC42SE1-204ENST00000483763 SPDYE4A6NLX3 237 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 ASAP2O43150 1006 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 CA12O43570 354 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 ZRANB2O95218 330 aaKnown RBP eCLIP9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 IGHA2P01877 340 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 ARF4P18085 180 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 SSTR3P32745 418 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 MYL6P60660 151 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 NOP14P78316 857 aaKnown RBP9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 CDR2Q01850 454 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 CUL2Q13617 745 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 KCTD19Q17RG1 926 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 KIZQ2M2Z5 673 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 C2CD6Q53TS8 623 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 WDR44Q5JSH3 913 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 DAAM2Q86T65 1068 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 TLK2Q86UE8 772 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 NT5DC3Q86UY8 548 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 FMNL3Q8IVF7 1028 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 CAGE1Q8TC20 777 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 CD99L2Q8TCZ2 262 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 CTNNBL1Q8WYA6 563 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 RFFLQ8WZ73 363 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 VTI1AQ96AJ9 217 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 CCDC94Q9BW85 323 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 CDHR5Q9HBB8 845 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 RAB21Q9UL25 225 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 GINS2Q9Y248 185 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 TNFSF13BQ9Y275 285 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 STXBP5LQ9Y2K9 1186 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 ATP8B3O60423 1300 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 F2P00734 622 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 TFAMQ00059 246 aaKnown RBP9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 BEX3Q00994 111 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 POU5F1BQ06416 359 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 WDR49Q8IV35 697 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 MSL3Q8N5Y2 521 aaKnown RBP9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 CXCL16Q9H2A7 254 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 PDZD7Q9H5P4 517 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 ABCB6Q9NP58 842 aa9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 RBM12Q9NTZ6 932 aaKnown RBP9.49□□□□□ -0.89
CDC42SE1-204ENST00000483763 NCANO14594 1321 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 KCNK3O14649 394 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 PHACTR2O75167 634 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 SASH3O75995 380 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 KIF4AO95239 1232 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 ASS1P00966 412 aaKnown RBP9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 CLTAP09496 248 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 GZMAP12544 262 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 TMOD1P28289 359 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 PHKA2P46019 1235 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 PDE6CP51160 858 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 ZNF200P98182 395 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 FAM187BQ17R55 369 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 LLGL2Q6P1M3 1020 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 CC2D1AQ6P1N0 951 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 TMEM270Q6UE05 265 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 ENOSF1Q7L5Y1 443 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 ZNF572Q7Z3I7 529 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 CPNE8Q86YQ8 564 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 NLRP7Q8WX94 980 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 MCOLN1Q9GZU1 580 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 FAM49AQ9H0Q0 323 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 XYLT2Q9H1B5 865 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 PRMT7Q9NVM4 692 aaPredicted RBP9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 MGAMO43451 1857 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 CCDC85CA6NKD9 419 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 RTN2O75298 545 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 NFICP08651 508 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 ATXN8OSP0DMR3 200 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 SMIM10L2AP0DMW4 78 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 SMIM10L2BP0DMW5 78 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 FAM193AP78312 1265 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 CKAP4Q07065 602 aaKnown RBP9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 RPS6KA1Q15418 735 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 DUOXA2Q1HG44 320 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 RUFY4Q6ZNE9 571 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 PEX26Q7Z412 305 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 BTBD6Q96KE9 485 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 LRRC1Q9BTT6 524 aa9.48□□□□□ -0.89
CDC42SE1-204ENST00000483763 ADAMTS10Q9H324 1103 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms