RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 BMPR1AP36894 532 aa19.3■□□□□ 0.68
CPNE1-224ENST00000483359 SURF1Q15526 300 aa19.3■□□□□ 0.68
CPNE1-224ENST00000483359 SPATA1Q5VX52 437 aa19.3■□□□□ 0.68
CPNE1-224ENST00000483359 WDR49Q8IV35 697 aa19.3■□□□□ 0.68
CPNE1-224ENST00000483359 BCL7CQ8WUZ0 217 aaPredicted RBP19.3■□□□□ 0.68
CPNE1-224ENST00000483359 FAM161BQ96MY7 647 aa19.3■□□□□ 0.68
CPNE1-224ENST00000483359 ZNF576Q9H609 170 aa19.3■□□□□ 0.68
CPNE1-224ENST00000483359 FAN1Q9Y2M0 1017 aa19.3■□□□□ 0.68
CPNE1-224ENST00000483359 DERAQ9Y315 318 aa19.3■□□□□ 0.68
CPNE1-224ENST00000483359 NFE2L3Q9Y4A8 694 aa19.3■□□□□ 0.68
CPNE1-224ENST00000483359 PODXLO00592 558 aa19.29■□□□□ 0.68
CPNE1-224ENST00000483359 MAPK13O15264 365 aa19.29■□□□□ 0.68
CPNE1-224ENST00000483359 KIF4AO95239 1232 aa19.29■□□□□ 0.68
CPNE1-224ENST00000483359 ALDH2P05091 517 aa19.29■□□□□ 0.68
CPNE1-224ENST00000483359 ITGB1P05556 798 aa19.29■□□□□ 0.68
CPNE1-224ENST00000483359 SCARA3Q6AZY7 606 aa19.29■□□□□ 0.68
CPNE1-224ENST00000483359 FILIP1Q7Z7B0 1213 aa19.29■□□□□ 0.68
CPNE1-224ENST00000483359 AOPEPQ8N6M6 819 aa19.29■□□□□ 0.68
CPNE1-224ENST00000483359 KLHL23Q8NBE8 558 aa19.29■□□□□ 0.68
CPNE1-224ENST00000483359 C3orf58Q8NDZ4 430 aa19.29■□□□□ 0.68
CPNE1-224ENST00000483359 ANKRD36BP1Q96IX9 119 aa19.29■□□□□ 0.68
CPNE1-224ENST00000483359 TMEM175Q9BSA9 504 aa19.29■□□□□ 0.68
CPNE1-224ENST00000483359 NAT10Q9H0A0 1025 aaKnown RBP19.29■□□□□ 0.68
CPNE1-224ENST00000483359 INTS13Q9NVM9 706 aa19.29■□□□□ 0.68
CPNE1-224ENST00000483359 DPP3Q9NY33 737 aa19.29■□□□□ 0.68
CPNE1-224ENST00000483359 ARMCX3Q9UH62 379 aaPredicted RBP19.29■□□□□ 0.68
CPNE1-224ENST00000483359 RWDD3Q9Y3V2 267 aa19.29■□□□□ 0.68
CPNE1-224ENST00000483359 EPOPA6NHQ4 379 aa19.28■□□□□ 0.68
CPNE1-224ENST00000483359 PPEF2O14830 753 aa19.28■□□□□ 0.68
CPNE1-224ENST00000483359 ITGB3P05106 788 aa19.28■□□□□ 0.68
CPNE1-224ENST00000483359 KRT19P08727 400 aa19.28■□□□□ 0.68
CPNE1-224ENST00000483359 ERVK-21P61565 698 aa19.28■□□□□ 0.68
CPNE1-224ENST00000483359 UPP1Q16831 310 aa19.28■□□□□ 0.68
CPNE1-224ENST00000483359 CT47A1Q5JQC4 288 aaPredicted RBP19.28■□□□□ 0.68
CPNE1-224ENST00000483359 FBXO22Q8NEZ5 403 aa19.28■□□□□ 0.68
CPNE1-224ENST00000483359 BORCS6Q96GS4 357 aa19.28■□□□□ 0.68
CPNE1-224ENST00000483359 CNOT6LQ96LI5 555 aaKnown RBP19.28■□□□□ 0.68
CPNE1-224ENST00000483359 TTYH1Q9H313 450 aaPredicted RBP19.28■□□□□ 0.68
CPNE1-224ENST00000483359 ALG13Q9NP73 1137 aaKnown RBP19.28■□□□□ 0.68
CPNE1-224ENST00000483359 SAMSN1Q9NSI8 373 aaKnown RBP19.28■□□□□ 0.68
CPNE1-224ENST00000483359 MARCH5Q9NX47 278 aa19.28■□□□□ 0.68
CPNE1-224ENST00000483359 B3GAT3O94766 335 aa19.28■□□□□ 0.68
CPNE1-224ENST00000483359 FGFR1OPO95684 399 aaKnown RBP19.28■□□□□ 0.68
CPNE1-224ENST00000483359 TNNC2P02585 160 aa19.28■□□□□ 0.68
CPNE1-224ENST00000483359 ZNF165P49910 485 aa19.28■□□□□ 0.68
CPNE1-224ENST00000483359 MYL5Q02045 173 aa19.28■□□□□ 0.68
CPNE1-224ENST00000483359 NT5DC4Q86YG4 428 aa19.28■□□□□ 0.68
CPNE1-224ENST00000483359 SLC39A11Q8N1S5 342 aa19.28■□□□□ 0.68
CPNE1-224ENST00000483359 C1orf127Q8N9H9 656 aa19.28■□□□□ 0.68
CPNE1-224ENST00000483359 ENOX1Q8TC92 643 aaKnown RBP19.28■□□□□ 0.68
CPNE1-224ENST00000483359 GDPD5Q8WTR4 605 aa19.28■□□□□ 0.68
CPNE1-224ENST00000483359 CACTINQ8WUQ7 758 aaKnown RBP19.28■□□□□ 0.68
CPNE1-224ENST00000483359 ZNF516Q92618 1163 aa19.28■□□□□ 0.68
CPNE1-224ENST00000483359 COL4A4P53420 1690 aaPredicted RBP19.27■□□□□ 0.68
CPNE1-224ENST00000483359 PLXNA4Q9HCM2 1894 aa19.27■□□□□ 0.68
CPNE1-224ENST00000483359 RFXAPO00287 272 aa19.27■□□□□ 0.68
CPNE1-224ENST00000483359 FGF18O76093 207 aa19.27■□□□□ 0.68
CPNE1-224ENST00000483359 CYP3A5P20815 502 aa19.27■□□□□ 0.68
CPNE1-224ENST00000483359 GCLMP48507 274 aa19.27■□□□□ 0.68
CPNE1-224ENST00000483359 DUOXA2Q1HG44 320 aa19.27■□□□□ 0.68
CPNE1-224ENST00000483359 C1orf220Q5T0J3 134 aa19.27■□□□□ 0.68
CPNE1-224ENST00000483359 USP37Q86T82 979 aa19.27■□□□□ 0.68
CPNE1-224ENST00000483359 TMC2Q8TDI7 906 aa19.27■□□□□ 0.68
CPNE1-224ENST00000483359 TMEM169Q96HH4 297 aa19.27■□□□□ 0.68
CPNE1-224ENST00000483359 IGSF21Q96ID5 467 aa19.27■□□□□ 0.68
CPNE1-224ENST00000483359 TSPAN18Q96SJ8 248 aa19.27■□□□□ 0.68
CPNE1-224ENST00000483359 SPG21Q9NZD8 308 aa19.27■□□□□ 0.68
CPNE1-224ENST00000483359 POLR2BP30876 1174 aaKnown RBP19.26■□□□□ 0.67
CPNE1-224ENST00000483359 PPP3CAQ08209 521 aa19.26■□□□□ 0.67
CPNE1-224ENST00000483359 BIRC3Q13489 604 aa19.26■□□□□ 0.67
CPNE1-224ENST00000483359 ZNF697Q5TEC3 545 aa19.26■□□□□ 0.67
CPNE1-224ENST00000483359 C9orf57Q5W0N0 161 aa19.26■□□□□ 0.67
CPNE1-224ENST00000483359 IRF2BP1Q8IU81 584 aa19.26■□□□□ 0.67
CPNE1-224ENST00000483359 UROC1Q96N76 676 aa19.26■□□□□ 0.67
CPNE1-224ENST00000483359 CLSTN1O94985 981 aa19.26■□□□□ 0.67
CPNE1-224ENST00000483359 GNA14O95837 355 aa19.26■□□□□ 0.67
CPNE1-224ENST00000483359 PPM1AP35813 382 aa19.26■□□□□ 0.67
CPNE1-224ENST00000483359 TDRD10Q5VZ19 366 aaKnown RBP19.26■□□□□ 0.67
CPNE1-224ENST00000483359 TRAPPC11Q7Z392 1133 aa19.26■□□□□ 0.67
CPNE1-224ENST00000483359 FRMD5Q7Z6J6 570 aa19.26■□□□□ 0.67
CPNE1-224ENST00000483359 SAMD11Q96NU1 681 aa19.26■□□□□ 0.67
CPNE1-224ENST00000483359 C11orf84Q9BUA3 381 aaPredicted RBP19.26■□□□□ 0.67
CPNE1-224ENST00000483359 COLEC11Q9BWP8 271 aa19.26■□□□□ 0.67
CPNE1-224ENST00000483359 METTL14Q9HCE5 456 aaKnown RBP19.26■□□□□ 0.67
CPNE1-224ENST00000483359 FANCLQ9NW38 375 aa19.26■□□□□ 0.67
CPNE1-224ENST00000483359 ADAM28Q9UKQ2 775 aa19.26■□□□□ 0.67
CPNE1-224ENST00000483359 NUB1Q9Y5A7 615 aa19.26■□□□□ 0.67
CPNE1-224ENST00000483359 C5orf67F2Z3F1 127 aa19.25■□□□□ 0.67
CPNE1-224ENST00000483359 I3L4J1 428 aa19.25■□□□□ 0.67
CPNE1-224ENST00000483359 TADA2AO75478 443 aa19.25■□□□□ 0.67
CPNE1-224ENST00000483359 LRPAP1P30533 357 aa19.25■□□□□ 0.67
CPNE1-224ENST00000483359 BRCC3P46736 316 aa19.25■□□□□ 0.67
CPNE1-224ENST00000483359 LRSAM1Q6UWE0 723 aa19.25■□□□□ 0.67
CPNE1-224ENST00000483359 Q7L0L9 218 aa19.25■□□□□ 0.67
CPNE1-224ENST00000483359 DDX27Q96GQ7 796 aaKnown RBP19.25■□□□□ 0.67
CPNE1-224ENST00000483359 PLVAPQ9BX97 442 aa19.25■□□□□ 0.67
CPNE1-224ENST00000483359 THAP9Q9H5L6 903 aa19.25■□□□□ 0.67
CPNE1-224ENST00000483359 SIX4Q9UIU6 781 aa19.25■□□□□ 0.67
CPNE1-224ENST00000483359 AGAP1Q9UPQ3 857 aa19.25■□□□□ 0.67
CPNE1-224ENST00000483359 PHACTR2O75167 634 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms