RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 EPB41L4AQ9HCS5 686 aaPredicted RBP4.69□□□□□ -1.66
VPS41-212ENST00000482217 ITM2CQ9NQX7 267 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 MKS1Q9NXB0 559 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 KCMF1Q9P0J7 381 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 RAI14Q9P0K7 980 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 CROTQ9UKG9 612 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 GTF3C4Q9UKN8 822 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 DENND2AQ9ULE3 1009 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 PCDHGB6Q9Y5F9 930 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 PRSS38A1L453 326 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 FOXN3O00409 490 aaPredicted RBP4.68□□□□□ -1.66
VPS41-212ENST00000482217 P4HA2O15460 535 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 RASA4O43374 803 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 FRS3O43559 492 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 HTATSF1O43719 755 aaKnown RBP4.68□□□□□ -1.66
VPS41-212ENST00000482217 TBX18O95935 607 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 KNG1P01042 644 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 PLA2G1BP04054 148 aaKnown RBP4.68□□□□□ -1.66
VPS41-212ENST00000482217 PFKMP08237 780 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 MTHFD2P13995 350 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 AKR1B1P15121 316 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 CD86P42081 329 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 GLRBP48167 497 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 CD151P48509 253 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 TRPC1P48995 793 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 UBXN2AP68543 259 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 IL13RA1P78552 427 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 MRPS9P82933 396 aaKnown RBP4.68□□□□□ -1.66
VPS41-212ENST00000482217 PPFIA1Q13136 1202 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 SMAD4Q13485 552 aaKnown RBP4.68□□□□□ -1.66
VPS41-212ENST00000482217 ZNF267Q14586 743 aaPredicted RBP4.68□□□□□ -1.66
VPS41-212ENST00000482217 NOLC1Q14978 699 aaKnown RBP eCLIP4.68□□□□□ -1.66
VPS41-212ENST00000482217 RTP5Q14D33 572 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 LLGL1Q15334 1064 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 PDCD2Q16342 344 aaPredicted RBP4.68□□□□□ -1.66
VPS41-212ENST00000482217 CCNG2Q16589 344 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 UGT8Q16880 541 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 TMEM240Q5SV17 173 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 ZBTB41Q5SVQ8 909 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 HECTD3Q5T447 861 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 CCBE1Q6UXH8 406 aaPredicted RBP4.68□□□□□ -1.66
VPS41-212ENST00000482217 MFSD6Q6ZSS7 791 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 TTLL7Q6ZT98 887 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 SAPCD2Q86UD0 394 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 GALNT13Q8IUC8 556 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 ERC1Q8IUD2 1116 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 CMIPQ8IY22 773 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 CMTR2Q8IYT2 770 aaKnown RBP4.68□□□□□ -1.66
VPS41-212ENST00000482217 FAXDC2Q96IV6 333 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 RADILQ96JH8 1075 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 ZSWIM3Q96MP5 696 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 PWWP2AQ96N64 755 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 AIFM3Q96NN9 605 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 ASB2Q96Q27 587 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 SEC62Q99442 399 aaKnown RBP4.68□□□□□ -1.66
VPS41-212ENST00000482217 ANO3Q9BYT9 981 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 LMAN2LQ9H0V9 348 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 RMI1Q9H9A7 625 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 AGO4Q9HCK5 861 aaKnown RBP4.68□□□□□ -1.66
VPS41-212ENST00000482217 SPATA6Q9NWH7 488 aaPredicted RBP4.68□□□□□ -1.66
VPS41-212ENST00000482217 TRMT1Q9NXH9 659 aaKnown RBP4.68□□□□□ -1.66
VPS41-212ENST00000482217 HERC5Q9UII4 1024 aaKnown RBP4.68□□□□□ -1.66
VPS41-212ENST00000482217 BLOC1S6Q9UL45 172 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 GIT1Q9Y2X7 761 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 MRFAP1Q9Y605 127 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 MYPNQ86TC9 1320 aa4.68□□□□□ -1.66
VPS41-212ENST00000482217 A0A0A6YYJ9 748 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 B4E171 279 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 H0Y858 1186 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 AKR1B10O60218 316 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 PCDHGA12O60330 932 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 PQBP1O60828 265 aaKnown RBP4.67□□□□□ -1.66
VPS41-212ENST00000482217 TPPPO94811 219 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 SASH1O94885 1247 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 CCND1P24385 295 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 RPL13P26373 211 aaKnown RBP4.67□□□□□ -1.66
VPS41-212ENST00000482217 IL13P35225 146 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 GPR15P49685 360 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 TMF1P82094 1093 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 MECOMQ03112 1051 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 ASIC2Q16515 512 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 DGKDQ16760 1214 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.67□□□□□ -1.66
VPS41-212ENST00000482217 SHROOM1Q2M3G4 852 aaPredicted RBP4.67□□□□□ -1.66
VPS41-212ENST00000482217 WDR72Q3MJ13 1102 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 CCDC178Q5BJE1 867 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 PHF19Q5T6S3 580 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 FAM205BPQ63HN1 556 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 TMEM200BQ69YZ2 307 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 GRAMD4Q6IC98 578 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 CCDC62Q6P9F0 684 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 PGM2L1Q6PCE3 622 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 C4orf50Q6ZRC1 276 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 CCDC149Q6ZUS6 474 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 FAM47EQ6ZV65 393 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 BRINP3Q76B58 766 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 BMP8AQ7Z5Y6 402 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 SP8Q8IXZ3 490 aa4.67□□□□□ -1.66
VPS41-212ENST00000482217 TRMT2AQ8IZ69 625 aaKnown RBP4.67□□□□□ -1.66
VPS41-212ENST00000482217 FAM43AQ8N2R8 423 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms