RNA–Protein interactions for RNA: ENST00000480615.1

SNRNP200-204, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 5

Gene SNRNP200, Length 1,646 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-204ENST00000480615 TRIM49P0CI25 452 aa14.58□□□□□ -0.08
SNRNP200-204ENST00000480615 TRIM49CP0CI26 452 aa14.58□□□□□ -0.08
SNRNP200-204ENST00000480615 EPB41P11171 864 aaKnown RBP14.58□□□□□ -0.08
SNRNP200-204ENST00000480615 HSP90AA2PQ14568 343 aaPredicted RBP14.58□□□□□ -0.08
SNRNP200-204ENST00000480615 PSMD6Q15008 389 aa14.58□□□□□ -0.08
SNRNP200-204ENST00000480615 NFIL3Q16649 462 aa14.58□□□□□ -0.08
SNRNP200-204ENST00000480615 TPD52L1Q16890 204 aaPredicted RBP14.58□□□□□ -0.08
SNRNP200-204ENST00000480615 SCARA3Q6AZY7 606 aa14.58□□□□□ -0.08
SNRNP200-204ENST00000480615 SLC39A11Q8N1S5 342 aa14.58□□□□□ -0.08
SNRNP200-204ENST00000480615 BEST2Q8NFU1 509 aa14.58□□□□□ -0.08
SNRNP200-204ENST00000480615 OR5B17Q8NGF7 314 aa14.58□□□□□ -0.08
SNRNP200-204ENST00000480615 TMEM169Q96HH4 297 aa14.58□□□□□ -0.08
SNRNP200-204ENST00000480615 MFSD14AQ96MC6 490 aa14.58□□□□□ -0.08
SNRNP200-204ENST00000480615 TMEM175Q9BSA9 504 aa14.58□□□□□ -0.08
SNRNP200-204ENST00000480615 C11orf84Q9BUA3 381 aaPredicted RBP14.58□□□□□ -0.08
SNRNP200-204ENST00000480615 SRRTQ9BXP5 876 aaKnown RBP14.58□□□□□ -0.08
SNRNP200-204ENST00000480615 DPP3Q9NY33 737 aa14.58□□□□□ -0.08
SNRNP200-204ENST00000480615 UBQLN1Q9UMX0 589 aaKnown RBP14.58□□□□□ -0.08
SNRNP200-204ENST00000480615 C2CD2Q9Y426 696 aa14.58□□□□□ -0.08
SNRNP200-204ENST00000480615 I3L4J1 428 aa14.57□□□□□ -0.08
SNRNP200-204ENST00000480615 PPEF2O14830 753 aa14.57□□□□□ -0.08
SNRNP200-204ENST00000480615 GRM6O15303 877 aa14.57□□□□□ -0.08
SNRNP200-204ENST00000480615 XPOTO43592 962 aaKnown RBP14.57□□□□□ -0.08
SNRNP200-204ENST00000480615 TADA2AO75478 443 aa14.57□□□□□ -0.08
SNRNP200-204ENST00000480615 CLSTN1O94985 981 aa14.57□□□□□ -0.08
SNRNP200-204ENST00000480615 KRT19P08727 400 aa14.57□□□□□ -0.08
SNRNP200-204ENST00000480615 KRT13P13646 458 aa14.57□□□□□ -0.08
SNRNP200-204ENST00000480615 CA8P35219 290 aa14.57□□□□□ -0.08
SNRNP200-204ENST00000480615 MYBPC2Q14324 1141 aa14.57□□□□□ -0.08
SNRNP200-204ENST00000480615 ZBTB6Q15916 424 aa14.57□□□□□ -0.08
SNRNP200-204ENST00000480615 UPP1Q16831 310 aa14.57□□□□□ -0.08
SNRNP200-204ENST00000480615 SPATA1Q5VX52 437 aa14.57□□□□□ -0.08
SNRNP200-204ENST00000480615 C3orf58Q8NDZ4 430 aa14.57□□□□□ -0.08
SNRNP200-204ENST00000480615 IGSF21Q96ID5 467 aa14.57□□□□□ -0.08
SNRNP200-204ENST00000480615 B3GALT6Q96L58 329 aa14.57□□□□□ -0.08
SNRNP200-204ENST00000480615 SAMD11Q96NU1 681 aa14.57□□□□□ -0.08
SNRNP200-204ENST00000480615 COLEC11Q9BWP8 271 aa14.57□□□□□ -0.08
SNRNP200-204ENST00000480615 MARCH5Q9NX47 278 aa14.57□□□□□ -0.08
SNRNP200-204ENST00000480615 DERAQ9Y315 318 aa14.57□□□□□ -0.08
SNRNP200-204ENST00000480615 LRRIQ3A6PVS8 624 aaPredicted RBP14.56□□□□□ -0.08
SNRNP200-204ENST00000480615 C5orf67F2Z3F1 127 aa14.56□□□□□ -0.08
SNRNP200-204ENST00000480615 H3BNC9 293 aa14.56□□□□□ -0.08
SNRNP200-204ENST00000480615 TNNC2P02585 160 aa14.56□□□□□ -0.08
SNRNP200-204ENST00000480615 ITGB3P05106 788 aa14.56□□□□□ -0.08
SNRNP200-204ENST00000480615 DNAJB1P25685 340 aa14.56□□□□□ -0.08
SNRNP200-204ENST00000480615 PPM1AP35813 382 aa14.56□□□□□ -0.08
SNRNP200-204ENST00000480615 VAMP7P51809 220 aa14.56□□□□□ -0.08
SNRNP200-204ENST00000480615 KRT17Q04695 432 aa14.56□□□□□ -0.08
SNRNP200-204ENST00000480615 CCDC40Q4G0X9 1142 aa14.56□□□□□ -0.08
SNRNP200-204ENST00000480615 DCAF17Q5H9S7 520 aaPredicted RBP14.56□□□□□ -0.08
SNRNP200-204ENST00000480615 TCERG1LQ5VWI1 586 aa14.56□□□□□ -0.08
SNRNP200-204ENST00000480615 LRSAM1Q6UWE0 723 aa14.56□□□□□ -0.08
SNRNP200-204ENST00000480615 PARD3BQ8TEW8 1205 aa14.56□□□□□ -0.08
SNRNP200-204ENST00000480615 CACTINQ8WUQ7 758 aaKnown RBP14.56□□□□□ -0.08
SNRNP200-204ENST00000480615 TMEM174Q8WUU8 243 aa14.56□□□□□ -0.08
SNRNP200-204ENST00000480615 ANKRD36BP1Q96IX9 119 aa14.56□□□□□ -0.08
SNRNP200-204ENST00000480615 CGRRF1Q99675 332 aa14.56□□□□□ -0.08
SNRNP200-204ENST00000480615 PLVAPQ9BX97 442 aa14.56□□□□□ -0.08
SNRNP200-204ENST00000480615 INTS13Q9NVM9 706 aa14.56□□□□□ -0.08
SNRNP200-204ENST00000480615 ADAM28Q9UKQ2 775 aa14.56□□□□□ -0.08
SNRNP200-204ENST00000480615 TMEM265A0A087WTH1 108 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 RB1P06400 928 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 IGFBP4P22692 258 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 POLR2BP30876 1174 aaKnown RBP14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 POU5F1Q01860 360 aaKnown RBP14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 BFSP1Q12934 665 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 SURF1Q15526 300 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 DUOXA2Q1HG44 320 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 C9orf57Q5W0N0 161 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 INTS8Q75QN2 995 aaKnown RBP14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 WDR49Q8IV35 697 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 C1orf127Q8N9H9 656 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 POF1BQ8WVV4 589 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 ZNF516Q92618 1163 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 UROC1Q96N76 676 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 VN1R3Q9BXE9 311 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.55□□□□□ -0.087e-11■■■■■ 48.1
SNRNP200-204ENST00000480615 NUB1Q9Y5A7 615 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 PCDHGC5Q9Y5F6 944 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 SCN1AP35498 2009 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 C2CD2LO14523 706 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 SLC16A3O15427 465 aaKnown RBP14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 CYP3A5P20815 502 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 ERCC5P28715 1186 aaPredicted RBP14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 BRCC3P46736 316 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 ZNF445P59923 1031 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 BIRC3Q13489 604 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 DCLRE1AQ6PJP8 1040 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 TAS1R1Q7RTX1 841 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 CEP57Q86XR8 500 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 ZC3H3Q8IXZ2 948 aaKnown RBP14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 VPS52Q8N1B4 723 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 MICALL1Q8N3F8 863 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 SPPL3Q8TCT6 385 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 MICAL1Q8TDZ2 1067 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 AUTS2Q8WXX7 1259 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 MYLIPQ8WY64 445 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 ELMO3Q96BJ8 720 aa14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 DDX27Q96GQ7 796 aaKnown RBP14.55□□□□□ -0.08
SNRNP200-204ENST00000480615 CEP63Q96MT8 703 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms