RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	ANKRD63	C9JTQ0	380 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	MEFV	O15553	781 aa	Predicted RBP	5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	TBC1D4	O60343	1298 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	ZC3H11A	O75152	810 aa	Known RBP eCLIP	5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	DDHD2	O94830	711 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	ARHGEF15	O94989	841 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	NR3C1	P04150	777 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	ADH1A	P07327	375 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	CXCL8	P10145	99 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	FOSL2	P15408	326 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	LIG1	P18858	919 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	AKAP5	P24588	427 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	MCM4	P33991	863 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	PSMC2	P35998	433 aa	Known RBP	5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	SLC11A1	P49279	550 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	GLUD2	P49448	558 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	SCNN1G	P51170	649 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	CYP24A1	Q07973	514 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	KCNA1	Q09470	495 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	TMEM132D	Q14C87	1099 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	DUSP6	Q16828	381 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	DUOXA2	Q1HG44	320 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	AAK1	Q2M2I8	961 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	UVSSA	Q2YD98	709 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	KIAA0319	Q5VV43	1072 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	TPGS2	Q68CL5	300 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	SLC8B1	Q6J4K2	584 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	FUT10	Q6P4F1	479 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	FOXD4L3	Q6VB84	417 aa	Predicted RBP	5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	C15orf39	Q6ZRI6	1047 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	FRMD5	Q7Z6J6	570 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	ZNF280B	Q86YH2	543 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	THNSL1	Q8IYQ7	743 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	EFHB	Q8N7U6	833 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	CEP120	Q8N960	986 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	MRPL43	Q8N983	215 aa	Known RBP	5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	APPL2	Q8NEU8	664 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	CMAS	Q8NFW8	434 aa	Predicted RBP	5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	PARD3B	Q8TEW8	1205 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	NOC3L	Q8WTT2	800 aa	Known RBP	5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	C2orf15	Q8WU43	125 aa	Known RBP	5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	POF1B	Q8WVV4	589 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	JAKMIP2	Q96AA8	810 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	PABPC5	Q96DU9	382 aa	Known RBP	5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	BORCS6	Q96GS4	357 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	ZNF668	Q96K58	619 aa	Predicted RBP	5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	FAM81B	Q96LP2	452 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	ZMAT2	Q96NC0	199 aa	Known RBP	5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	CGRRF1	Q99675	332 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	TSG101	Q99816	390 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	CBWD1	Q9BRT8	395 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	EMILIN2	Q9BXX0	1053 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	NUP62CL	Q9H1M0	184 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	BLZF1	Q9H2G9	400 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	RNF39	Q9H2S5	420 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	PLEKHA4	Q9H4M7	779 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	SLC39A2	Q9NP94	309 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	INTS13	Q9NVM9	706 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	DZANK1	Q9NVP4	752 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	RBAK	Q9NYW8	714 aa	Predicted RBP	5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	PARP2	Q9UGN5	583 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	RWDD2A	Q9UIY3	292 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	FRMD4B	Q9Y2L6	1034 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	COQ4	Q9Y3A0	265 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	HES2	Q9Y543	173 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	PLXNA3	P51805	1871 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	PATJ	Q8NI35	1801 aa		5.51	□□□□□ -1.53
HDAC6-223	ENST00000480525	CUL9	Q8IWT3	2517 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	REV3L	O60673	3130 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	ZNF638	Q14966	1978 aa	Known RBP	5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	C2orf16	Q68DN1	1984 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	GTPBP10	A4D1E9	387 aa	Known RBP	5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	C2orf71	A6NGG8	1288 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	LACTBL1	A8MY62	500 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	PPP1R3G	B7ZBB8	358 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525		H7C4K7	107 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	PODXL	O00592	558 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	CETN3	O15182	167 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	GRM6	O15303	877 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	EXOC3	O60645	756 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	N4BP1	O75113	896 aa	Known RBP	5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	GADD45B	O75293	160 aa	Predicted RBP	5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	TACC1	O75410	805 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	B3GAT3	O94766	335 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	PRPF6	O94906	941 aa	Known RBP	5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	POMC	P01189	267 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	UROD	P06132	367 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	PRR29	P0C7W0	189 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	MYOG	P15173	224 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	NR2F2	P24468	414 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	TNFSF9	P41273	254 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	PRCP	P42785	496 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	NDUFV1	P49821	464 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	TAF6	P49848	677 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	AFF1	P51825	1210 aa	Known RBP	5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	LILRA4	P59901	499 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	ITIH3	Q06033	890 aa		5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	SOX4	Q06945	474 aa	Predicted RBP	5.5	□□□□□ -1.53
HDAC6-223	ENST00000480525	BFSP1	Q12934	665 aa		5.5	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms