RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 F8W810 466 aa27.09■■□□□ 1.93
PERM1-203ENST00000479361 LRPAP1P30533 357 aa27.09■■□□□ 1.93
PERM1-203ENST00000479361 CYP24A1Q07973 514 aa27.09■■□□□ 1.93
PERM1-203ENST00000479361 ELAVL2Q12926 359 aaKnown RBP27.09■■□□□ 1.93
PERM1-203ENST00000479361 CEP135Q66GS9 1140 aa27.09■■□□□ 1.93
PERM1-203ENST00000479361 FUT10Q6P4F1 479 aa27.09■■□□□ 1.93
PERM1-203ENST00000479361 TMC7Q7Z402 723 aa27.09■■□□□ 1.93
PERM1-203ENST00000479361 PPP2R3CQ969Q6 453 aa27.09■■□□□ 1.93
PERM1-203ENST00000479361 FNBP1Q96RU3 617 aa27.09■■□□□ 1.93
PERM1-203ENST00000479361 TRAPPC3O43617 180 aa27.08■■□□□ 1.93
PERM1-203ENST00000479361 CSPG5O95196 566 aa27.08■■□□□ 1.93
PERM1-203ENST00000479361 SOD2P04179 222 aa27.08■■□□□ 1.93
PERM1-203ENST00000479361 CCNE1P24864 410 aa27.08■■□□□ 1.93
PERM1-203ENST00000479361 ERVFC1P60507 584 aa27.08■■□□□ 1.93
PERM1-203ENST00000479361 TFAMQ00059 246 aaKnown RBP27.08■■□□□ 1.93
PERM1-203ENST00000479361 ADAM9Q13443 819 aa27.08■■□□□ 1.93
PERM1-203ENST00000479361 PSMD6Q15008 389 aa27.08■■□□□ 1.93
PERM1-203ENST00000479361 EFCAB13Q8IY85 973 aa27.08■■□□□ 1.93
PERM1-203ENST00000479361 HASPINQ8TF76 798 aa27.08■■□□□ 1.93
PERM1-203ENST00000479361 MFSD14AQ96MC6 490 aa27.08■■□□□ 1.93
PERM1-203ENST00000479361 NSUN3Q9H649 340 aaKnown RBP27.08■■□□□ 1.93
PERM1-203ENST00000479361 PDCD11Q14690 1871 aaKnown RBP27.08■■□□□ 1.93
PERM1-203ENST00000479361 PPP1R3GB7ZBB8 358 aa27.07■■□□□ 1.92
PERM1-203ENST00000479361 MAPK13O15264 365 aa27.07■■□□□ 1.92
PERM1-203ENST00000479361 CD44P16070 742 aaKnown RBP27.07■■□□□ 1.92
PERM1-203ENST00000479361 WNT7BP56706 349 aa27.07■■□□□ 1.92
PERM1-203ENST00000479361 SMC1AQ14683 1233 aaKnown RBP27.07■■□□□ 1.92
PERM1-203ENST00000479361 KLHL10Q6JEL2 608 aa27.07■■□□□ 1.92
PERM1-203ENST00000479361 WDR49Q8IV35 697 aa27.07■■□□□ 1.92
PERM1-203ENST00000479361 MICALL1Q8N3F8 863 aa27.07■■□□□ 1.92
PERM1-203ENST00000479361 VN1R3Q9BXE9 311 aa27.07■■□□□ 1.92
PERM1-203ENST00000479361 ZBP1Q9H171 429 aa27.07■■□□□ 1.92
PERM1-203ENST00000479361 DPP3Q9NY33 737 aa27.07■■□□□ 1.92
PERM1-203ENST00000479361 NUB1Q9Y5A7 615 aa27.07■■□□□ 1.92
PERM1-203ENST00000479361 BICDL2A1A5D9 508 aa27.06■■□□□ 1.92
PERM1-203ENST00000479361 FSCN2O14926 492 aa27.06■■□□□ 1.92
PERM1-203ENST00000479361 CETN3O15182 167 aa27.06■■□□□ 1.92
PERM1-203ENST00000479361 EFEMP2O95967 443 aa27.06■■□□□ 1.92
PERM1-203ENST00000479361 TMEM191BP0C7N4 346 aa27.06■■□□□ 1.92
PERM1-203ENST00000479361 CTSAP10619 480 aa27.06■■□□□ 1.92
PERM1-203ENST00000479361 IRS1P35568 1242 aa27.06■■□□□ 1.92
PERM1-203ENST00000479361 FKBP3Q00688 224 aaKnown RBP27.06■■□□□ 1.92
PERM1-203ENST00000479361 DUOXA2Q1HG44 320 aa27.06■■□□□ 1.92
PERM1-203ENST00000479361 CCDC183Q5T5S1 534 aa27.06■■□□□ 1.92
PERM1-203ENST00000479361 PLPP4Q5VZY2 271 aa27.06■■□□□ 1.92
PERM1-203ENST00000479361 ANKRD40Q6AI12 368 aa27.06■■□□□ 1.92
PERM1-203ENST00000479361 USP37Q86T82 979 aa27.06■■□□□ 1.92
PERM1-203ENST00000479361 RNF168Q8IYW5 571 aaPredicted RBP27.06■■□□□ 1.92
PERM1-203ENST00000479361 MLKLQ8NB16 471 aa27.06■■□□□ 1.92
PERM1-203ENST00000479361 CCDC127Q96BQ5 260 aa27.06■■□□□ 1.92
PERM1-203ENST00000479361 ANKRD36BP1Q96IX9 119 aa27.06■■□□□ 1.92
PERM1-203ENST00000479361 HERC2P3Q9BVR0 1158 aa27.06■■□□□ 1.92
PERM1-203ENST00000479361 GPR62Q9BZJ7 368 aa27.06■■□□□ 1.92
PERM1-203ENST00000479361 SSX2IPQ9Y2D8 614 aa27.06■■□□□ 1.92
PERM1-203ENST00000479361 ANK1P16157 1881 aa27.05■■□□□ 1.92
PERM1-203ENST00000479361 TNNC2P02585 160 aa27.05■■□□□ 1.92
PERM1-203ENST00000479361 URODP06132 367 aa27.05■■□□□ 1.92
PERM1-203ENST00000479361 DLATP10515 647 aaKnown RBP27.05■■□□□ 1.92
PERM1-203ENST00000479361 PAX3P23760 479 aa27.05■■□□□ 1.92
PERM1-203ENST00000479361 PSMC2P35998 433 aaKnown RBP27.05■■□□□ 1.92
PERM1-203ENST00000479361 CASP4P49662 377 aa27.05■■□□□ 1.92
PERM1-203ENST00000479361 GUCY2FP51841 1108 aa27.05■■□□□ 1.92
PERM1-203ENST00000479361 PAK1Q13153 545 aa27.05■■□□□ 1.92
PERM1-203ENST00000479361 USP41Q3LFD5 358 aa27.05■■□□□ 1.92
PERM1-203ENST00000479361 C9orf57Q5W0N0 161 aa27.05■■□□□ 1.92
PERM1-203ENST00000479361 KIAA1841Q6NSI8 718 aa27.05■■□□□ 1.92
PERM1-203ENST00000479361 FOXR2Q6PJQ5 311 aa27.05■■□□□ 1.92
PERM1-203ENST00000479361 NELFBQ8WX92 580 aa27.05■■□□□ 1.92
PERM1-203ENST00000479361 INTS13Q9NVM9 706 aa27.05■■□□□ 1.92
PERM1-203ENST00000479361 CXCL14O95715 111 aa27.04■■□□□ 1.92
PERM1-203ENST00000479361 TNNI1P19237 187 aa27.04■■□□□ 1.92
PERM1-203ENST00000479361 PMS1P54277 932 aaKnown RBP27.04■■□□□ 1.92
PERM1-203ENST00000479361 MRPL43Q8N983 215 aaKnown RBP27.04■■□□□ 1.92
PERM1-203ENST00000479361 C3orf58Q8NDZ4 430 aa27.04■■□□□ 1.92
PERM1-203ENST00000479361 MAFAQ8NHW3 353 aaPredicted RBP27.04■■□□□ 1.92
PERM1-203ENST00000479361 SYAP1Q96A49 352 aaPredicted RBP27.04■■□□□ 1.92
PERM1-203ENST00000479361 CGRRF1Q99675 332 aa27.04■■□□□ 1.92
PERM1-203ENST00000479361 MKNK1Q9BUB5 465 aa27.04■■□□□ 1.92
PERM1-203ENST00000479361 MRPL17Q9NRX2 175 aaKnown RBP27.04■■□□□ 1.92
PERM1-203ENST00000479361 ITGA11Q9UKX5 1188 aa27.04■■□□□ 1.92
PERM1-203ENST00000479361 CTNND2Q9UQB3 1225 aa27.04■■□□□ 1.92
PERM1-203ENST00000479361 ANO9A1A5B4 782 aa27.03■■□□□ 1.92
PERM1-203ENST00000479361 AKAP3O75969 853 aa27.03■■□□□ 1.92
PERM1-203ENST00000479361 CA8P35219 290 aa27.03■■□□□ 1.92
PERM1-203ENST00000479361 GLUD2P49448 558 aa27.03■■□□□ 1.92
PERM1-203ENST00000479361 FAM171A1Q5VUB5 890 aa27.03■■□□□ 1.92
PERM1-203ENST00000479361 RBM43Q6ZSC3 357 aaKnown RBP27.03■■□□□ 1.92
PERM1-203ENST00000479361 INTS8Q75QN2 995 aaKnown RBP27.03■■□□□ 1.92
PERM1-203ENST00000479361 FAM186BQ8IYM0 893 aa27.03■■□□□ 1.92
PERM1-203ENST00000479361 MTMR12Q9C0I1 747 aa27.03■■□□□ 1.92
PERM1-203ENST00000479361 CHST7Q9NS84 486 aa27.03■■□□□ 1.92
PERM1-203ENST00000479361 DACH1Q9UI36 760 aa27.03■■□□□ 1.92
PERM1-203ENST00000479361 R3HCC1Q9Y3T6 440 aaKnown RBP27.03■■□□□ 1.92
PERM1-203ENST00000479361 IRAK3Q9Y616 596 aa27.03■■□□□ 1.92
PERM1-203ENST00000479361 PRRC2BQ5JSZ5 2229 aaKnown RBP27.02■■□□□ 1.92
PERM1-203ENST00000479361 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.02■■□□□ 1.92
PERM1-203ENST00000479361 TRIM49BA6NDI0 452 aa27.02■■□□□ 1.92
PERM1-203ENST00000479361 PIRO00625 290 aa27.02■■□□□ 1.92
PERM1-203ENST00000479361 EPB41P11171 864 aaKnown RBP27.02■■□□□ 1.92
PERM1-203ENST00000479361 KRT13P13646 458 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms