RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 BRSK2Q8IWQ3 736 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 GPD1LQ8N335 351 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 GLIS3Q8NEA6 775 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 ASB2Q96Q27 587 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 EMILIN2Q9BXX0 1053 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 GPR62Q9BZJ7 368 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 SLC39A2Q9NP94 309 aa16.81■□□□□ 0.28
C9orf3-217ENST00000479161 HOXB8P17481 243 aaPredicted RBP16.8■□□□□ 0.28
C9orf3-217ENST00000479161 UBE2HP62256 183 aa16.8■□□□□ 0.28
C9orf3-217ENST00000479161 COBLL1Q53SF7 1204 aa16.8■□□□□ 0.28
C9orf3-217ENST00000479161 ZBTB41Q5SVQ8 909 aa16.8■□□□□ 0.28
C9orf3-217ENST00000479161 CD300LGQ6UXG3 332 aa16.8■□□□□ 0.28
C9orf3-217ENST00000479161 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.8■□□□□ 0.28
C9orf3-217ENST00000479161 KIAA0895Q8NCT3 520 aa16.8■□□□□ 0.28
C9orf3-217ENST00000479161 PIK3R5Q8WYR1 880 aa16.8■□□□□ 0.28
C9orf3-217ENST00000479161 KIF12Q96FN5 646 aa16.8■□□□□ 0.28
C9orf3-217ENST00000479161 MSLNLQ96KJ4 702 aa16.8■□□□□ 0.28
C9orf3-217ENST00000479161 CBWD1Q9BRT8 395 aa16.8■□□□□ 0.28
C9orf3-217ENST00000479161 AGPAT3Q9NRZ7 376 aa16.8■□□□□ 0.28
C9orf3-217ENST00000479161 RMND1Q9NWS8 449 aa16.8■□□□□ 0.28
C9orf3-217ENST00000479161 TTC28Q96AY4 2481 aa16.79■□□□□ 0.28
C9orf3-217ENST00000479161 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.79■□□□□ 0.28
C9orf3-217ENST00000479161 ZNF233A6NK53 670 aa16.79■□□□□ 0.28
C9orf3-217ENST00000479161 PODXLO00592 558 aa16.79■□□□□ 0.28
C9orf3-217ENST00000479161 PDXKO00764 312 aa16.79■□□□□ 0.28
C9orf3-217ENST00000479161 SYN3O14994 580 aa16.79■□□□□ 0.28
C9orf3-217ENST00000479161 CLASP2O75122 1294 aaKnown RBP16.79■□□□□ 0.28
C9orf3-217ENST00000479161 FGFR3P22607 806 aa16.79■□□□□ 0.28
C9orf3-217ENST00000479161 AARSP49588 968 aaKnown RBP eCLIP16.79■□□□□ 0.28
C9orf3-217ENST00000479161 NFIL3Q16649 462 aa16.79■□□□□ 0.28
C9orf3-217ENST00000479161 TJAP1Q5JTD0 557 aa16.79■□□□□ 0.28
C9orf3-217ENST00000479161 KIAA1841Q6NSI8 718 aa16.79■□□□□ 0.28
C9orf3-217ENST00000479161 GUF1Q8N442 669 aaKnown RBP16.79■□□□□ 0.28
C9orf3-217ENST00000479161 BEST2Q8NFU1 509 aa16.79■□□□□ 0.28
C9orf3-217ENST00000479161 HDAC7Q8WUI4 952 aa16.79■□□□□ 0.28
C9orf3-217ENST00000479161 CASP10Q92851 521 aa16.79■□□□□ 0.28
C9orf3-217ENST00000479161 TTPALQ9BTX7 342 aa16.79■□□□□ 0.28
C9orf3-217ENST00000479161 IKZF4Q9H2S9 585 aa16.79■□□□□ 0.28
C9orf3-217ENST00000479161 PRDM6Q9NQX0 595 aa16.79■□□□□ 0.28
C9orf3-217ENST00000479161 CLDND1Q9NY35 253 aa16.79■□□□□ 0.28
C9orf3-217ENST00000479161 DPP7Q9UHL4 492 aa16.79■□□□□ 0.28
C9orf3-217ENST00000479161 FAM50BQ9Y247 325 aa16.79■□□□□ 0.28
C9orf3-217ENST00000479161 ANO9A1A5B4 782 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 F8W810 466 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 SMC2O95347 1197 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 PAPLNO95428 1278 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 GLP2RO95838 553 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 ADH1AP07327 375 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 CNPP09543 421 aaKnown RBP16.78■□□□□ 0.28
C9orf3-217ENST00000479161 PRR29P0C7W0 189 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 TMEM132DQ14C87 1099 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 RTL10Q7L3V2 364 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 TAS1R1Q7RTX1 841 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 XXYLT1Q8NBI6 393 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 SLC22A17Q8WUG5 538 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 CACTINQ8WUQ7 758 aaKnown RBP16.78■□□□□ 0.28
C9orf3-217ENST00000479161 C18orf25Q96B23 403 aaPredicted RBP16.78■□□□□ 0.28
C9orf3-217ENST00000479161 SUSD3Q96L08 255 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 KLHL5Q96PQ7 755 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 FAM213AQ9BRX8 229 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 OXCT2Q9BYC2 517 aaPredicted RBP16.78■□□□□ 0.28
C9orf3-217ENST00000479161 RHOBTB2Q9BYZ6 727 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 KCTD10Q9H3F6 313 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 DMAC2Q9NW81 257 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 HSPBP1Q9NZL4 362 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 CLEC1BQ9P126 229 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 TRAF3IP3Q9Y228 551 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 PCDHGC5Q9Y5F6 944 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 HCFC2Q9Y5Z7 792 aa16.78■□□□□ 0.28
C9orf3-217ENST00000479161 PIRO00625 290 aa16.77■□□□□ 0.28
C9orf3-217ENST00000479161 KINO60870 393 aaKnown RBP16.77■□□□□ 0.28
C9orf3-217ENST00000479161 BMP1P13497 986 aa16.77■□□□□ 0.28
C9orf3-217ENST00000479161 KCNA5P22460 613 aa16.77■□□□□ 0.28
C9orf3-217ENST00000479161 GTF2F1P35269 517 aaKnown RBP eCLIP16.77■□□□□ 0.287e-6■■■■□ 21.3
C9orf3-217ENST00000479161 FAM171A1Q5VUB5 890 aa16.77■□□□□ 0.28
C9orf3-217ENST00000479161 JADE1Q6IE81 842 aa16.77■□□□□ 0.28
C9orf3-217ENST00000479161 ANKS3Q6ZW76 656 aa16.77■□□□□ 0.28
C9orf3-217ENST00000479161 RBM23Q86U06 439 aaKnown RBP16.77■□□□□ 0.28
C9orf3-217ENST00000479161 C3orf58Q8NDZ4 430 aa16.77■□□□□ 0.28
C9orf3-217ENST00000479161 GOLGA2P5Q9HBQ8 144 aa16.77■□□□□ 0.28
C9orf3-217ENST00000479161 DZANK1Q9NVP4 752 aa16.77■□□□□ 0.28
C9orf3-217ENST00000479161 RBAKQ9NYW8 714 aaPredicted RBP16.77■□□□□ 0.28
C9orf3-217ENST00000479161 BACE2Q9Y5Z0 518 aa16.77■□□□□ 0.28
C9orf3-217ENST00000479161 SCN1AP35498 2009 aa16.77■□□□□ 0.27
C9orf3-217ENST00000479161 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.76■□□□□ 0.27
C9orf3-217ENST00000479161 ARHGEF37A1IGU5 675 aa16.76■□□□□ 0.27
C9orf3-217ENST00000479161 M0QZQ0 153 aa16.76■□□□□ 0.27
C9orf3-217ENST00000479161 PER2O15055 1255 aa16.76■□□□□ 0.27
C9orf3-217ENST00000479161 MAPK13O15264 365 aa16.76■□□□□ 0.27
C9orf3-217ENST00000479161 TBX10O75333 385 aa16.76■□□□□ 0.27
C9orf3-217ENST00000479161 PRPF40AO75400 957 aaKnown RBP16.76■□□□□ 0.27
C9orf3-217ENST00000479161 NDUFV1P49821 464 aa16.76■□□□□ 0.27
C9orf3-217ENST00000479161 CLCN4P51793 760 aa16.76■□□□□ 0.27
C9orf3-217ENST00000479161 MCCD1P59942 119 aaPredicted RBP16.76■□□□□ 0.27
C9orf3-217ENST00000479161 ENPEPQ07075 957 aa16.76■□□□□ 0.27
C9orf3-217ENST00000479161 MRPL58Q14197 206 aaKnown RBP16.76■□□□□ 0.27
C9orf3-217ENST00000479161 ELMSAN1Q6PJG2 1045 aa16.76■□□□□ 0.27
C9orf3-217ENST00000479161 CYP26C1Q6V0L0 522 aa16.76■□□□□ 0.27
C9orf3-217ENST00000479161 SMRP1Q8NCR6 262 aa16.76■□□□□ 0.27
C9orf3-217ENST00000479161 VN1R2Q8NFZ6 395 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms