RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 MCL1Q07820 350 aa24.93■■□□□ 1.58
C9orf3-216ENST00000478603 VARS2Q5ST30 1063 aaKnown RBP24.93■■□□□ 1.58
C9orf3-216ENST00000478603 HAUS6Q7Z4H7 955 aa24.93■■□□□ 1.58
C9orf3-216ENST00000478603 RASSF8Q8NHQ8 419 aa24.93■■□□□ 1.58
C9orf3-216ENST00000478603 HCFC1R1Q9NWW0 138 aa24.93■■□□□ 1.58
C9orf3-216ENST00000478603 ODF2LQ9ULJ1 636 aa24.93■■□□□ 1.58
C9orf3-216ENST00000478603 NUB1Q9Y5A7 615 aa24.93■■□□□ 1.58
C9orf3-216ENST00000478603 MYH15Q9Y2K3 1946 aa24.92■■□□□ 1.58
C9orf3-216ENST00000478603 XYLBO75191 536 aa24.92■■□□□ 1.58
C9orf3-216ENST00000478603 BMP15O95972 392 aa24.92■■□□□ 1.58
C9orf3-216ENST00000478603 RPL9P32969 192 aaKnown RBP24.92■■□□□ 1.58
C9orf3-216ENST00000478603 LONP1P36776 959 aaKnown RBP24.92■■□□□ 1.58
C9orf3-216ENST00000478603 CLCN5P51795 746 aa24.92■■□□□ 1.58
C9orf3-216ENST00000478603 SPAG1Q07617 926 aa24.92■■□□□ 1.58
C9orf3-216ENST00000478603 HTR4Q13639 388 aa24.92■■□□□ 1.58
C9orf3-216ENST00000478603 MYCT1Q8N699 235 aa24.92■■□□□ 1.58
C9orf3-216ENST00000478603 ATOH1Q92858 354 aaPredicted RBP24.92■■□□□ 1.58
C9orf3-216ENST00000478603 TUBGCP4Q9UGJ1 667 aa24.92■■□□□ 1.58
C9orf3-216ENST00000478603 NUMBLQ9Y6R0 609 aa24.92■■□□□ 1.58
C9orf3-216ENST00000478603 ANHXE9PGG2 379 aa24.91■■□□□ 1.58
C9orf3-216ENST00000478603 H0YCG3 227 aa24.91■■□□□ 1.58
C9orf3-216ENST00000478603 PI15O43692 258 aa24.91■■□□□ 1.58
C9orf3-216ENST00000478603 FAM13AO94988 1023 aa24.91■■□□□ 1.58
C9orf3-216ENST00000478603 NUBP1P53384 320 aa24.91■■□□□ 1.58
C9orf3-216ENST00000478603 ROR1Q01973 937 aa24.91■■□□□ 1.58
C9orf3-216ENST00000478603 UVSSAQ2YD98 709 aa24.91■■□□□ 1.58
C9orf3-216ENST00000478603 ITFG1Q8TB96 612 aa24.91■■□□□ 1.58
C9orf3-216ENST00000478603 RAD54LQ92698 747 aa24.91■■□□□ 1.58
C9orf3-216ENST00000478603 NXPE3Q969Y0 559 aa24.91■■□□□ 1.58
C9orf3-216ENST00000478603 RPP25Q9BUL9 199 aaKnown RBP24.91■■□□□ 1.58
C9orf3-216ENST00000478603 CA14Q9ULX7 337 aa24.91■■□□□ 1.58
C9orf3-216ENST00000478603 CLIC4Q9Y696 253 aa24.91■■□□□ 1.58
C9orf3-216ENST00000478603 KRBA1A5PL33 1030 aa24.9■■□□□ 1.58
C9orf3-216ENST00000478603 K7ENM7 598 aa24.9■■□□□ 1.58
C9orf3-216ENST00000478603 SRFP11831 508 aa24.9■■□□□ 1.58
C9orf3-216ENST00000478603 MCM4P33991 863 aa24.9■■□□□ 1.58
C9orf3-216ENST00000478603 TNFSF9P41273 254 aa24.9■■□□□ 1.58
C9orf3-216ENST00000478603 LIG4P49917 911 aa24.9■■□□□ 1.58
C9orf3-216ENST00000478603 ARPP19P56211 112 aa24.9■■□□□ 1.58
C9orf3-216ENST00000478603 SPECC1Q5M775 1068 aa24.9■■□□□ 1.58
C9orf3-216ENST00000478603 ZHX3Q9H4I2 956 aa24.9■■□□□ 1.58
C9orf3-216ENST00000478603 DNMT3BQ9UBC3 853 aaKnown RBP24.9■■□□□ 1.58
C9orf3-216ENST00000478603 WNT16Q9UBV4 365 aa24.9■■□□□ 1.58
C9orf3-216ENST00000478603 CDH7Q9ULB5 785 aa24.9■■□□□ 1.58
C9orf3-216ENST00000478603 TBX20Q9UMR3 447 aa24.9■■□□□ 1.58
C9orf3-216ENST00000478603 WDR27A2RRH5 827 aa24.89■■□□□ 1.58
C9orf3-216ENST00000478603 SYN3O14994 580 aa24.89■■□□□ 1.58
C9orf3-216ENST00000478603 KRT18P05783 430 aaKnown RBP24.89■■□□□ 1.58
C9orf3-216ENST00000478603 CLTAP09496 248 aa24.89■■□□□ 1.58
C9orf3-216ENST00000478603 AOC1P19801 751 aa24.89■■□□□ 1.58
C9orf3-216ENST00000478603 ZNF131P52739 623 aa24.89■■□□□ 1.58
C9orf3-216ENST00000478603 ZBTB41Q5SVQ8 909 aa24.89■■□□□ 1.58
C9orf3-216ENST00000478603 SLC8B1Q6J4K2 584 aa24.89■■□□□ 1.58
C9orf3-216ENST00000478603 PARM1Q6UWI2 310 aa24.89■■□□□ 1.58
C9orf3-216ENST00000478603 USP49Q70CQ1 688 aa24.89■■□□□ 1.58
C9orf3-216ENST00000478603 FGF13Q92913 245 aa24.89■■□□□ 1.58
C9orf3-216ENST00000478603 FGF14Q92915 247 aa24.89■■□□□ 1.58
C9orf3-216ENST00000478603 PARVGQ9HBI0 331 aa24.89■■□□□ 1.58
C9orf3-216ENST00000478603 ZFP37Q9Y6Q3 630 aaPredicted RBP24.89■■□□□ 1.58
C9orf3-216ENST00000478603 HNRNPDLO14979 420 aaKnown RBP24.88■■□□□ 1.57
C9orf3-216ENST00000478603 TBC1D4O60343 1298 aa24.88■■□□□ 1.57
C9orf3-216ENST00000478603 POU2F2P09086 479 aa24.88■■□□□ 1.57
C9orf3-216ENST00000478603 MARCKSP29966 332 aaPredicted RBP24.88■■□□□ 1.57
C9orf3-216ENST00000478603 MRPL58Q14197 206 aaKnown RBP24.88■■□□□ 1.57
C9orf3-216ENST00000478603 PABPC1LQ4VXU2 614 aaKnown RBP24.88■■□□□ 1.57
C9orf3-216ENST00000478603 FAM173BQ6P4H8 233 aa24.88■■□□□ 1.57
C9orf3-216ENST00000478603 ZNF461Q8TAF7 563 aa24.88■■□□□ 1.57
C9orf3-216ENST00000478603 GPR152Q8TDT2 470 aa24.88■■□□□ 1.57
C9orf3-216ENST00000478603 LARP4BQ92615 738 aaKnown RBP24.88■■□□□ 1.57
C9orf3-216ENST00000478603 KCNN1Q92952 543 aa24.88■■□□□ 1.57
C9orf3-216ENST00000478603 KIF12Q96FN5 646 aa24.88■■□□□ 1.57
C9orf3-216ENST00000478603 EPSTI1Q96J88 318 aa24.88■■□□□ 1.57
C9orf3-216ENST00000478603 SUSD3Q96L08 255 aa24.88■■□□□ 1.57
C9orf3-216ENST00000478603 IRF2BPLQ9H1B7 796 aa24.88■■□□□ 1.57
C9orf3-216ENST00000478603 FBXL5Q9UKA1 691 aa24.88■■□□□ 1.57
C9orf3-216ENST00000478603 TTC26A0AVF1 554 aa24.87■■□□□ 1.57
C9orf3-216ENST00000478603 STK25O00506 426 aa24.87■■□□□ 1.57
C9orf3-216ENST00000478603 TRAK2O60296 914 aa24.87■■□□□ 1.57
C9orf3-216ENST00000478603 ABLIM3O94929 683 aa24.87■■□□□ 1.57
C9orf3-216ENST00000478603 NMT1P30419 496 aaKnown RBP24.87■■□□□ 1.57
C9orf3-216ENST00000478603 PTPAQ15257 358 aa24.87■■□□□ 1.57
C9orf3-216ENST00000478603 CTXN3Q4LDR2 81 aa24.87■■□□□ 1.57
C9orf3-216ENST00000478603 ING5Q8WYH8 240 aa24.87■■□□□ 1.57
C9orf3-216ENST00000478603 DDX12PQ92771 950 aa24.87■■□□□ 1.57
C9orf3-216ENST00000478603 FIZ1Q96SL8 496 aa24.87■■□□□ 1.57
C9orf3-216ENST00000478603 CCSER1Q9C0I3 900 aa24.87■■□□□ 1.57
C9orf3-216ENST00000478603 PLEKHA5Q9HAU0 1116 aa24.87■■□□□ 1.57
C9orf3-216ENST00000478603 LACTBL1A8MY62 500 aa24.86■■□□□ 1.57
C9orf3-216ENST00000478603 H7C4K7 107 aa24.86■■□□□ 1.57
C9orf3-216ENST00000478603 PRRG1O14668 218 aa24.86■■□□□ 1.57
C9orf3-216ENST00000478603 FAM189A1O60320 539 aa24.86■■□□□ 1.57
C9orf3-216ENST00000478603 TBCAO75347 108 aaKnown RBP24.86■■□□□ 1.57
C9orf3-216ENST00000478603 PIGRP01833 764 aa24.86■■□□□ 1.57
C9orf3-216ENST00000478603 PDCP20941 246 aa24.86■■□□□ 1.57
C9orf3-216ENST00000478603 ELF1P32519 619 aa24.86■■□□□ 1.57
C9orf3-216ENST00000478603 GUCY2FP51841 1108 aa24.86■■□□□ 1.57
C9orf3-216ENST00000478603 PPP2R3AQ06190 1150 aa24.86■■□□□ 1.57
C9orf3-216ENST00000478603 SLC39A4Q6P5W5 647 aa24.86■■□□□ 1.57
C9orf3-216ENST00000478603 RTL10Q7L3V2 364 aa24.86■■□□□ 1.57
C9orf3-216ENST00000478603 ANK1P16157 1881 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms