RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 ANKS3Q6ZW76 656 aa8.62□□□□□ -1.03
DDX39B-218ENST00000478365 ADGRD2Q7Z7M1 963 aa8.62□□□□□ -1.03
DDX39B-218ENST00000478365 RBM23Q86U06 439 aaKnown RBP8.62□□□□□ -1.03
DDX39B-218ENST00000478365 TMEM173Q86WV6 379 aaPredicted RBP8.62□□□□□ -1.03
DDX39B-218ENST00000478365 CEP120Q8N960 986 aa8.62□□□□□ -1.03
DDX39B-218ENST00000478365 SMRP1Q8NCR6 262 aa8.62□□□□□ -1.03
DDX39B-218ENST00000478365 CACTINQ8WUQ7 758 aaKnown RBP8.62□□□□□ -1.03
DDX39B-218ENST00000478365 BCL7CQ8WUZ0 217 aaPredicted RBP8.62□□□□□ -1.03
DDX39B-218ENST00000478365 KIF12Q96FN5 646 aa8.62□□□□□ -1.03
DDX39B-218ENST00000478365 ZBTB45Q96K62 511 aaPredicted RBP8.62□□□□□ -1.03
DDX39B-218ENST00000478365 MSLNLQ96KJ4 702 aa8.62□□□□□ -1.03
DDX39B-218ENST00000478365 RHOBTB2Q9BYZ6 727 aa8.62□□□□□ -1.03
DDX39B-218ENST00000478365 PLEKHA4Q9H4M7 779 aa8.62□□□□□ -1.03
DDX39B-218ENST00000478365 RMND1Q9NWS8 449 aa8.62□□□□□ -1.03
DDX39B-218ENST00000478365 TBC1D7Q9P0N9 293 aa8.62□□□□□ -1.03
DDX39B-218ENST00000478365 CPSF3Q9UKF6 684 aaKnown RBP8.62□□□□□ -1.03
DDX39B-218ENST00000478365 MAFFQ9ULX9 164 aa8.62□□□□□ -1.03
DDX39B-218ENST00000478365 USP20Q9Y2K6 914 aa8.62□□□□□ -1.03
DDX39B-218ENST00000478365 NUB1Q9Y5A7 615 aa8.62□□□□□ -1.03
DDX39B-218ENST00000478365 REV3LO60673 3130 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 MTCL1Q9Y4B5 1905 aaKnown RBP8.61□□□□□ -1.03
DDX39B-218ENST00000478365 A0A1B0GVL5 298 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 GRXCR2A6NFK2 248 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 SPDYE4A6NLX3 237 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 HIDE1A8MVS5 230 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 FAM189A1O60320 539 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 LILRB3O75022 631 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 CLASP2O75122 1294 aaKnown RBP8.61□□□□□ -1.03
DDX39B-218ENST00000478365 PRPF40AO75400 957 aaKnown RBP8.61□□□□□ -1.03
DDX39B-218ENST00000478365 KIF4AO95239 1232 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 SMC2O95347 1197 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 GLUD1P00367 558 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 MYBP10242 640 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 BMP1P13497 986 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 FGFR3P22607 806 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 MTHFRP42898 656 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 AFMP43652 599 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 NDUFA8P51970 172 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 FAM160A1Q05DH4 1040 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 MYBPC2Q14324 1141 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 KCNB1Q14721 858 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 TMEM132DQ14C87 1099 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 ZBTB6Q15916 424 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 ENOX2Q16206 610 aaKnown RBP8.61□□□□□ -1.03
DDX39B-218ENST00000478365 GLRA4Q5JXX5 417 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 FAM171A1Q5VUB5 890 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 KIAA0319Q5VV43 1072 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 ANKRD54Q6NXT1 300 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 SLC39A4Q6P5W5 647 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 KRBA2Q6ZNG9 492 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 EPM2AIP1Q7L775 607 aaPredicted RBP8.61□□□□□ -1.03
DDX39B-218ENST00000478365 USP37Q86T82 979 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 BRSK2Q8IWQ3 736 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 C12orf56Q8IXR9 622 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 ELOA2Q8IYF1 753 aaPredicted RBP8.61□□□□□ -1.03
DDX39B-218ENST00000478365 GPD1LQ8N335 351 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 CMASQ8NFW8 434 aaPredicted RBP8.61□□□□□ -1.03
DDX39B-218ENST00000478365 ZNF507Q8TCN5 953 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 ADAMTS19Q8TE59 1207 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 RIN2Q8WYP3 895 aaPredicted RBP8.61□□□□□ -1.03
DDX39B-218ENST00000478365 PAGE5Q96GU1 130 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 RIPOR3Q96MK2 946 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 TIGD1Q96MW7 591 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 UHRF1Q96T88 793 aaPredicted RBP8.61□□□□□ -1.03
DDX39B-218ENST00000478365 VN1R3Q9BXE9 311 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 SFXN1Q9H9B4 322 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 PRDM6Q9NQX0 595 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 SERTAD1Q9UHV2 236 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 DSEQ9UL01 958 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 R3HCC1Q9Y3T6 440 aaKnown RBP8.61□□□□□ -1.03
DDX39B-218ENST00000478365 BACE2Q9Y5Z0 518 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 HCFC2Q9Y5Z7 792 aa8.61□□□□□ -1.03
DDX39B-218ENST00000478365 ZNF233A6NK53 670 aa8.6□□□□□ -1.03
DDX39B-218ENST00000478365 LACTBL1A8MY62 500 aa8.6□□□□□ -1.03
DDX39B-218ENST00000478365 H3BQ06 376 aaPredicted RBP8.6□□□□□ -1.03
DDX39B-218ENST00000478365 PER2O15055 1255 aa8.6□□□□□ -1.03
DDX39B-218ENST00000478365 MBTPS2O43462 519 aa8.6□□□□□ -1.03
DDX39B-218ENST00000478365 TBX10O75333 385 aa8.6□□□□□ -1.03
DDX39B-218ENST00000478365 PRPF6O94906 941 aaKnown RBP8.6□□□□□ -1.03
DDX39B-218ENST00000478365 RHOBTB3O94955 611 aa8.6□□□□□ -1.03
DDX39B-218ENST00000478365 ZNF202O95125 648 aa8.6□□□□□ -1.03
DDX39B-218ENST00000478365 CSPG5O95196 566 aa8.6□□□□□ -1.03
DDX39B-218ENST00000478365 POU2F2P09086 479 aa8.6□□□□□ -1.03
DDX39B-218ENST00000478365 CNPP09543 421 aaKnown RBP8.6□□□□□ -1.03
DDX39B-218ENST00000478365 ADSSP30520 456 aa8.6□□□□□ -1.03
DDX39B-218ENST00000478365 MCM4P33991 863 aa8.6□□□□□ -1.03
DDX39B-218ENST00000478365 LTBRP36941 435 aa8.6□□□□□ -1.03
DDX39B-218ENST00000478365 PPP1R2P41236 205 aa8.6□□□□□ -1.03
DDX39B-218ENST00000478365 CLCN4P51793 760 aa8.6□□□□□ -1.03
DDX39B-218ENST00000478365 CLCNKBP51801 687 aa8.6□□□□□ -1.03
DDX39B-218ENST00000478365 TFF2Q03403 129 aa8.6□□□□□ -1.03
DDX39B-218ENST00000478365 KCNC3Q14003 757 aa8.6□□□□□ -1.03
DDX39B-218ENST00000478365 SMAD2Q15796 467 aaKnown RBP8.6□□□□□ -1.03
DDX39B-218ENST00000478365 PSMD5Q16401 504 aa8.6□□□□□ -1.03
DDX39B-218ENST00000478365 KNOP1Q1ED39 458 aaKnown RBP8.6□□□□□ -1.03
DDX39B-218ENST00000478365 LIN9Q5TKA1 542 aa8.6□□□□□ -1.03
DDX39B-218ENST00000478365 SPATA1Q5VX52 437 aa8.6□□□□□ -1.03
DDX39B-218ENST00000478365 C15orf39Q6ZRI6 1047 aa8.6□□□□□ -1.03
DDX39B-218ENST00000478365 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.6□□□□□ -1.03
DDX39B-218ENST00000478365 SPATA18Q8TC71 538 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms