RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 AFF3P51826 1226 aaKnown RBP3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 JAM2P57087 298 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 IRX1P78414 480 aaPredicted RBP3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 HTRA3P83110 453 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 CAP1Q01518 475 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 CYP4A11Q02928 519 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 GRIN1Q05586 938 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 ADCY2Q08462 1091 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 ZNF460Q14592 562 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 SAFBQ15424 915 aaKnown RBP eCLIP3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 CLPPQ16740 277 aaPredicted RBP3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 C21orf62-AS1Q17RA5 79 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 SLC5A9Q2M3M2 681 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 PAN2Q504Q3 1202 aaKnown RBP3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 TMEM177Q53S58 311 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 MUM1L1Q5H9M0 696 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 RRP12Q5JTH9 1297 aaKnown RBP3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 TCERG1LQ5VWI1 586 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 NUGGCQ68CJ6 796 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 MCTP2Q6DN12 878 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 RETSATQ6NUM9 610 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 HHIPL2Q6UWX4 724 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 UBE2R2Q712K3 238 aaPredicted RBP3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 OVCH1Q7RTY7 1134 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 NLRP14Q86W24 1093 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 SLC44A2Q8IWA5 706 aaPredicted RBP3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 NIM1KQ8IY84 436 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 PEX5LQ8IYB4 626 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 CCDC13Q8IYE1 715 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 LINC00482Q8N8I6 264 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 USP38Q8NB14 1042 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 MSANTD4Q8NCY6 345 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 FAM76AQ8TAV0 307 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 ADAMTS18Q8TE60 1221 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 SSH3Q8TE77 659 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 GCC1Q96CN9 775 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 ASB2Q96Q27 587 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 GORASP1Q9BQQ3 440 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 NOL10Q9BSC4 688 aaKnown RBP3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 TTPALQ9BTX7 342 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 LRRCC1Q9C099 1032 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 PNNQ9H307 717 aaKnown RBP3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 NCOR1P1Q9H4R4 102 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 SMURF1Q9HCE7 757 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 ABCF3Q9NUQ8 709 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 SPATA7Q9P0W8 599 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 SAMD15Q9P1V8 674 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 AGTPBP1Q9UPW5 1226 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 SPEF1Q9Y4P9 236 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 TELO2Q9Y4R8 837 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 ADCY10Q96PN6 1610 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 DHX29Q7Z478 1369 aaKnown RBP3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 PRG4Q92954 1404 aaPredicted RBP3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 SLC12A8A0AV02 714 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 VSTM5A8MXK1 200 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 HNRNPCL2B2RXH8 293 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 M0R2C6 588 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 NCAM2O15394 837 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 HNRNPCL1O60812 293 aaKnown RBP3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 DKC1O60832 514 aaKnown RBP eCLIP3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 KATNA1O75449 491 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 STAM2O75886 525 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 GLRX3O76003 335 aaKnown RBP3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 GFPT2O94808 682 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 MBD4O95243 580 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 STAMBPO95630 424 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 PLA2G1BP04054 148 aaKnown RBP3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 IFIT1P09914 478 aaKnown RBP3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 JMJD7P0C870 316 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 MYBL2P10244 700 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 STMN1P16949 149 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 PTPN1P18031 435 aaKnown RBP3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 GNL1P36915 607 aaPredicted RBP3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 ASMTP46597 345 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 ITGA1P56199 1179 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 RELQ04864 619 aaPredicted RBP3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 PSMD6Q15008 389 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 PLCB4Q15147 1175 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 PDCD2Q16342 344 aaPredicted RBP3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 WSCD2Q2TBF2 565 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 CFAP100Q494V2 611 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 BTBD8Q5XKL5 378 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 FCRLBQ6BAA4 426 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 CNSTQ6PJW8 725 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 KDELC1Q6UW63 502 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 CCDC80Q76M96 950 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 C1QL4Q86Z23 238 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 SPATA2LQ8IUW3 424 aaPredicted RBP3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 EFCAB13Q8IY85 973 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 KRT222Q8N1A0 295 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 DCLK2Q8N568 766 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 TTLL6Q8N841 843 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 C2orf69Q8N8R5 385 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 NAT8LQ8N9F0 302 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 SPERTQ8NA61 448 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 SPATA5Q8NB90 893 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 KYQ8NBH2 561 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 OR52K2Q8NGK3 314 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 ZBTB8AQ96BR9 441 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 TIFAQ96CG3 184 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms