RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 DOLKQ9UPQ8 538 aa8.8□□□□□ -1
CNTNAP3B-205ENST00000476961 PCDHGA3Q9Y5H0 932 aa8.8□□□□□ -1
CNTNAP3B-205ENST00000476961 TRAV6A0A075B6T7 132 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 A0A0U1RQJ8 604 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 A8MX80 341 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 CNOT3O75175 753 aaKnown RBP8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 UBOX5O94941 541 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 HSPA9P38646 679 aaKnown RBP8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 BCAP31P51572 246 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 CD83Q01151 205 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 GALNT1Q10472 559 aaPredicted RBP8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 TOB2Q14106 344 aaPredicted RBP8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 AOC3Q16853 763 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 B3GNT6Q6ZMB0 384 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 DBX2Q6ZNG2 339 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 RAVER1Q8IY67 606 aaKnown RBP8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 FAM9CQ8IZT9 166 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 LARGE2Q8N3Y3 721 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 KIF2BQ8N4N8 673 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 LILRB4Q8NHJ6 448 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 NOC3LQ8WTT2 800 aaKnown RBP8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 COX4I2Q96KJ9 171 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 NAPBQ9H115 298 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 FARSBQ9NSD9 589 aaKnown RBP8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 PIM2Q9P1W9 311 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 ZNHIT2Q9UHR6 403 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 TRIM33Q9UPN9 1127 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 TACC3Q9Y6A5 838 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 GTPBP10A4D1E9 387 aaKnown RBP8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 SFI1A8K8P3 1242 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 M6PRP20645 277 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 ALAS2P22557 587 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 ADSLP30566 484 aaPredicted RBP8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 VHLP40337 213 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 TBX4P57082 545 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 GSTO1P78417 241 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 EXOSC10Q01780 885 aaKnown RBP8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 SIM2Q14190 667 aaPredicted RBP8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 KLHL38Q2WGJ6 581 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 KCTD21Q4G0X4 260 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 INTS8Q75QN2 995 aaKnown RBP8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 PODNQ7Z5L7 613 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 PIGWQ7Z7B1 504 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 ZC3H18Q86VM9 953 aaKnown RBP8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 NKX2-3Q8TAU0 364 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 RIN3Q8TB24 985 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 CALML6Q8TD86 181 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 PIGOQ8TEQ8 1089 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 INTS12Q96CB8 462 aaKnown RBP8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 LPIN3Q9BQK8 851 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 ZNF277Q9NRM2 450 aaPredicted RBP8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 FAF1Q9UNN5 650 aaPredicted RBP8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 SCAF8Q9UPN6 1271 aaKnown RBP8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 LIMCH1Q9UPQ0 1083 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 COQ6Q9Y2Z9 468 aa8.79□□□□□ -1
CNTNAP3B-205ENST00000476961 MROH7-TTC4A0A0A0MT08 1334 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 G3V3G9 751 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 ECE2O60344 883 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 COPS2P61201 443 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 NFE2L1Q14494 772 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 NAALADL2Q58DX5 795 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 C6orf132Q5T0Z8 1188 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 DCAF8Q5TAQ9 597 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 LRRTM3Q86VH5 581 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 IFNLR1Q8IU57 520 aaPredicted RBP8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 RTKN2Q8IZC4 609 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 ELMOD1Q8N336 334 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 DTX3Q8N9I9 347 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 SLC17A8Q8NDX2 589 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 SUPT20HQ8NEM7 779 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 CEP70Q8NHQ1 597 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 GIPC3Q8TF64 312 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 DDX50Q9BQ39 737 aaKnown RBP8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 TTPALQ9BTX7 342 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 FOXP3Q9BZS1 431 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 TRPV6Q9H1D0 765 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 HSD3B7Q9H2F3 369 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 CD93Q9NPY3 652 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 ABI2Q9NYB9 513 aaPredicted RBP8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 HDAC9Q9UKV0 1011 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 RBMX2Q9Y388 322 aaKnown RBP8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 MACROD2A1Z1Q3 448 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 H3BUI4 141 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 SMIM22K7EJ46 135 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 SNPHO15079 494 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 PFDN6O15212 129 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 TFPTP0C1Z6 253 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 ATP1A3P13637 1013 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 TBXAS1P24557 533 aaPredicted RBP8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 HPDP32754 393 aaPredicted RBP8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 PCYT1AP49585 367 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 ZNF135P52742 658 aaPredicted RBP8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 POLR2GP62487 172 aaKnown RBP eCLIP8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 PPP2R2BQ00005 443 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 CTDSPL2Q05D32 466 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 TOMM20Q15388 145 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 TMEM266Q2M3C6 531 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 DPCR1Q3MIW9 517 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 FYB2Q5VWT5 728 aa8.78□□□□□ -1
CNTNAP3B-205ENST00000476961 MB21D2Q8IYB1 491 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms