RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 POLIQ9UNA4 740 aa14.38□□□□□ -0.11
MRPL55-228ENST00000476267 R4GN57 208 aa14.38□□□□□ -0.11
MRPL55-228ENST00000476267 KANSL1LA0AUZ9 987 aa14.37□□□□□ -0.11
MRPL55-228ENST00000476267 CCDC169A6NNP5 214 aa14.37□□□□□ -0.11
MRPL55-228ENST00000476267 SYN3O14994 580 aa14.37□□□□□ -0.11
MRPL55-228ENST00000476267 ECI2O75521 394 aa14.37□□□□□ -0.11
MRPL55-228ENST00000476267 RHOP08100 348 aa14.37□□□□□ -0.11
MRPL55-228ENST00000476267 RFX1P22670 979 aa14.37□□□□□ -0.11
MRPL55-228ENST00000476267 FCARP24071 287 aa14.37□□□□□ -0.11
MRPL55-228ENST00000476267 GUCY2CP25092 1073 aa14.37□□□□□ -0.11
MRPL55-228ENST00000476267 YARSP54577 528 aaKnown RBP14.37□□□□□ -0.11
MRPL55-228ENST00000476267 OSTNP61366 133 aa14.37□□□□□ -0.11
MRPL55-228ENST00000476267 PRKCQQ04759 706 aa14.37□□□□□ -0.11
MRPL55-228ENST00000476267 DMP1Q13316 513 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-228ENST00000476267 SNW1Q13573 536 aaKnown RBP14.37□□□□□ -0.11
MRPL55-228ENST00000476267 MLF2Q15773 248 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-228ENST00000476267 KRT79Q5XKE5 535 aa14.37□□□□□ -0.11
MRPL55-228ENST00000476267 MPZL3Q6UWV2 235 aa14.37□□□□□ -0.11
MRPL55-228ENST00000476267 TCEAL8Q8IYN2 117 aa14.37□□□□□ -0.11
MRPL55-228ENST00000476267 C18orf25Q96B23 403 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-228ENST00000476267 OSBPL6Q9BZF3 934 aa14.37□□□□□ -0.11
MRPL55-228ENST00000476267 RAB34Q9BZG1 259 aa14.37□□□□□ -0.11
MRPL55-228ENST00000476267 PLA2G2FQ9BZM2 168 aa14.37□□□□□ -0.11
MRPL55-228ENST00000476267 KMT5AQ9NQR1 393 aa14.37□□□□□ -0.11
MRPL55-228ENST00000476267 SLC38A7Q9NVC3 462 aa14.37□□□□□ -0.11
MRPL55-228ENST00000476267 DNM3Q9UQ16 869 aa14.37□□□□□ -0.11
MRPL55-228ENST00000476267 MTF2Q9Y483 593 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-228ENST00000476267 RBM19Q9Y4C8 960 aaKnown RBP14.37□□□□□ -0.11
MRPL55-228ENST00000476267 NRG2O14511 850 aaPredicted RBP14.36□□□□□ -0.11
MRPL55-228ENST00000476267 LMNAP02545 664 aaKnown RBP14.36□□□□□ -0.11
MRPL55-228ENST00000476267 ATF2P15336 505 aa14.36□□□□□ -0.11
MRPL55-228ENST00000476267 FOXK2Q01167 660 aa14.36□□□□□ -0.11
MRPL55-228ENST00000476267 GNL2Q13823 731 aaKnown RBP14.36□□□□□ -0.11
MRPL55-228ENST00000476267 SLC10A6Q3KNW5 377 aa14.36□□□□□ -0.11
MRPL55-228ENST00000476267 SLC44A4Q53GD3 710 aa14.36□□□□□ -0.11
MRPL55-228ENST00000476267 FAM184AQ8NB25 1140 aa14.36□□□□□ -0.11
MRPL55-228ENST00000476267 TMEM161BQ8NDZ6 487 aa14.36□□□□□ -0.11
MRPL55-228ENST00000476267 SPIRE2Q8WWL2 714 aa14.36□□□□□ -0.11
MRPL55-228ENST00000476267 ING5Q8WYH8 240 aa14.36□□□□□ -0.11
MRPL55-228ENST00000476267 KCNN1Q92952 543 aa14.36□□□□□ -0.11
MRPL55-228ENST00000476267 SHDQ96IW2 340 aa14.36□□□□□ -0.11
MRPL55-228ENST00000476267 ZBTB45Q96K62 511 aaPredicted RBP14.36□□□□□ -0.11
MRPL55-228ENST00000476267 PNMA5Q96PV4 448 aa14.36□□□□□ -0.11
MRPL55-228ENST00000476267 TIPINQ9BVW5 301 aa14.36□□□□□ -0.11
MRPL55-228ENST00000476267 HAPLN2Q9GZV7 340 aa14.36□□□□□ -0.11
MRPL55-228ENST00000476267 GDE1Q9NZC3 331 aa14.36□□□□□ -0.11
MRPL55-228ENST00000476267 WDR87Q6ZQQ6 2873 aa14.36□□□□□ -0.11
MRPL55-228ENST00000476267 MYH11P35749 1972 aa14.36□□□□□ -0.11
MRPL55-228ENST00000476267 TSC2P49815 1807 aa14.36□□□□□ -0.11
MRPL55-228ENST00000476267 SFI1A8K8P3 1242 aa14.35□□□□□ -0.11
MRPL55-228ENST00000476267 SLC16A4O15374 487 aa14.35□□□□□ -0.11
MRPL55-228ENST00000476267 TOM1L1O75674 476 aa14.35□□□□□ -0.11
MRPL55-228ENST00000476267 SEC24AO95486 1093 aa14.35□□□□□ -0.11
MRPL55-228ENST00000476267 CEBPBP17676 345 aa14.35□□□□□ -0.11
MRPL55-228ENST00000476267 RPL9P32969 192 aaKnown RBP14.35□□□□□ -0.11
MRPL55-228ENST00000476267 CCR2P41597 374 aa14.35□□□□□ -0.11
MRPL55-228ENST00000476267 ATP2C1P98194 919 aaPredicted RBP14.35□□□□□ -0.11
MRPL55-228ENST00000476267 C8orf34Q49A92 452 aa14.35□□□□□ -0.11
MRPL55-228ENST00000476267 SUSD3Q96L08 255 aa14.35□□□□□ -0.11
MRPL55-228ENST00000476267 ACAP3Q96P50 834 aa14.35□□□□□ -0.11
MRPL55-228ENST00000476267 LTB4R2Q9NPC1 389 aa14.35□□□□□ -0.11
MRPL55-228ENST00000476267 FBXL5Q9UKA1 691 aa14.35□□□□□ -0.11
MRPL55-228ENST00000476267 MRPS23Q9Y3D9 190 aaKnown RBP14.35□□□□□ -0.11
MRPL55-228ENST00000476267 MOSPD3O75425 235 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 MICAL2O94851 1124 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 MAPTP10636 758 aaKnown RBP14.34□□□□□ -0.11
MRPL55-228ENST00000476267 PLS3P13797 630 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 PTPN2P17706 415 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 SLC12A3P55017 1021 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 PFKPQ01813 784 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 FZD5Q13467 585 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 ZNF528Q3MIS6 628 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 TPGS2Q68CL5 300 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 TANGO2Q6ICL3 276 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 DTHD1Q6ZMT9 781 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 ERMP1Q7Z2K6 904 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 ZNF687Q8N1G0 1237 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 TMEM130Q8N3G9 435 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 KCTD17Q8N5Z5 321 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 SYT2Q8N9I0 419 aaPredicted RBP14.34□□□□□ -0.11
MRPL55-228ENST00000476267 SUMF1Q8NBK3 374 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 BEST2Q8NFU1 509 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 NELL1Q92832 810 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 CLDN23Q96B33 292 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 ELSPBP1Q96BH3 223 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 TCEAL4Q96EI5 215 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 MCRS1Q96EZ8 462 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 TUBGCP4Q9UGJ1 667 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 FBXO4Q9UKT5 387 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 INSL5Q9Y5Q6 135 aa14.34□□□□□ -0.11
MRPL55-228ENST00000476267 FAM189A1O60320 539 aa14.33□□□□□ -0.12
MRPL55-228ENST00000476267 VNN2O95498 520 aa14.33□□□□□ -0.12
MRPL55-228ENST00000476267 LRG1P02750 347 aa14.33□□□□□ -0.12
MRPL55-228ENST00000476267 CD72P21854 359 aa14.33□□□□□ -0.12
MRPL55-228ENST00000476267 TARSP26639 723 aaKnown RBP14.33□□□□□ -0.12
MRPL55-228ENST00000476267 ID4P47928 161 aa14.33□□□□□ -0.12
MRPL55-228ENST00000476267 EPHA5P54756 1037 aa14.33□□□□□ -0.12
MRPL55-228ENST00000476267 MCL1Q07820 350 aa14.33□□□□□ -0.12
MRPL55-228ENST00000476267 NOLC1Q14978 699 aaKnown RBP eCLIP14.33□□□□□ -0.12
MRPL55-228ENST00000476267 ZBTB6Q15916 424 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms