RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 FAXDC2Q96IV6 333 aa17.08■□□□□ 0.33
VARS2-207ENST00000476162 ERP44Q9BS26 406 aa17.08■□□□□ 0.33
VARS2-207ENST00000476162 TMEM134Q9H6X4 195 aa17.08■□□□□ 0.33
VARS2-207ENST00000476162 APOBEC3GQ9HC16 384 aaKnown RBP17.08■□□□□ 0.33
VARS2-207ENST00000476162 MAFO75444 373 aaPredicted RBP17.08■□□□□ 0.32
VARS2-207ENST00000476162 ARIH2O95376 493 aa17.08■□□□□ 0.32
VARS2-207ENST00000476162 MARK3P27448 753 aa17.08■□□□□ 0.32
VARS2-207ENST00000476162 FNTAP49354 379 aa17.08■□□□□ 0.32
VARS2-207ENST00000476162 NBPF20Q3BBV1 942 aa17.08■□□□□ 0.32
VARS2-207ENST00000476162 CEP85LQ5SZL2 805 aa17.08■□□□□ 0.32
VARS2-207ENST00000476162 DUPD1Q68J44 220 aa17.08■□□□□ 0.32
VARS2-207ENST00000476162 OR5B17Q8NGF7 314 aa17.08■□□□□ 0.32
VARS2-207ENST00000476162 RNF217Q8TC41 542 aa17.08■□□□□ 0.32
VARS2-207ENST00000476162 ZNFX1Q9P2E3 1918 aaKnown RBP17.08■□□□□ 0.32
VARS2-207ENST00000476162 CNTNAP2Q9UHC6 1331 aa17.07■□□□□ 0.32
VARS2-207ENST00000476162 PHF2O75151 1096 aa17.07■□□□□ 0.32
VARS2-207ENST00000476162 HSPA6P17066 643 aa17.07■□□□□ 0.32
VARS2-207ENST00000476162 ACO1P21399 889 aaKnown RBP17.07■□□□□ 0.32
VARS2-207ENST00000476162 CTNNA2P26232 953 aa17.07■□□□□ 0.32
VARS2-207ENST00000476162 CUL2Q13617 745 aa17.07■□□□□ 0.32
VARS2-207ENST00000476162 DHX34Q14147 1143 aaKnown RBP17.07■□□□□ 0.32
VARS2-207ENST00000476162 C11orf91Q3C1V1 193 aa17.07■□□□□ 0.32
VARS2-207ENST00000476162 PHLDB2Q86SQ0 1253 aa17.07■□□□□ 0.32
VARS2-207ENST00000476162 JAMLQ86YT9 394 aa17.07■□□□□ 0.32
VARS2-207ENST00000476162 MCOLN2Q8IZK6 566 aa17.07■□□□□ 0.32
VARS2-207ENST00000476162 OR2W6PQ8NHA6 318 aa17.07■□□□□ 0.32
VARS2-207ENST00000476162 MAGOHBQ96A72 148 aaKnown RBP17.07■□□□□ 0.32
VARS2-207ENST00000476162 CGRRF1Q99675 332 aa17.07■□□□□ 0.32
VARS2-207ENST00000476162 CAPS2Q9BXY5 557 aa17.07■□□□□ 0.32
VARS2-207ENST00000476162 TXNRD2Q9NNW7 524 aa17.07■□□□□ 0.32
VARS2-207ENST00000476162 A0A0G2JMZ2 1700 aa17.07■□□□□ 0.32
VARS2-207ENST00000476162 TCRBV7S2A1N4TA0A589 114 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 FAM187AA6NFU0 413 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 H0YGN5 161 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 KIF3CO14782 793 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 BPIFB4P59827 614 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 HSDL1Q3SXM5 330 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 C2CD6Q53TS8 623 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 SCARA3Q6AZY7 606 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 TMC3Q7Z5M5 1100 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 TRIM50Q86XT4 487 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 ZNF677Q86XU0 584 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 ERO1BQ86YB8 467 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 UBLCP1Q8WVY7 318 aaPredicted RBP17.06■□□□□ 0.32
VARS2-207ENST00000476162 TRIM7Q9C029 511 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 AZI2Q9H6S1 392 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 ANAPC7Q9UJX3 599 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 NFS1Q9Y697 457 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 SOCS7O14512 581 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 CLDN3O15551 220 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 RRM1P23921 792 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 MAPK4P31152 587 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 CHRNA3P32297 505 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 RWDD2BP57060 319 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 Q3C1V9 767 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 LLGL2Q6P1M3 1020 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 TTC27Q6P3X3 843 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 LRIG3Q6UXM1 1119 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 SLC13A5Q86YT5 568 aaPredicted RBP17.06■□□□□ 0.32
VARS2-207ENST00000476162 CYFIP2Q96F07 1278 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.06■□□□□ 0.32
VARS2-207ENST00000476162 PCDHB4Q9Y5E5 795 aa17.06■□□□□ 0.32
VARS2-207ENST00000476162 DICER1Q9UPY3 1922 aaKnown RBP17.06■□□□□ 0.32
VARS2-207ENST00000476162 OTOFQ9HC10 1997 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 CFHP08603 1231 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 PTGIRP43119 386 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 DHX9Q08211 1270 aaKnown RBP17.05■□□□□ 0.32
VARS2-207ENST00000476162 TTC19Q6DKK2 380 aaPredicted RBP17.05■□□□□ 0.32
VARS2-207ENST00000476162 TMEM270Q6UE05 265 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 ATP6V1G3Q96LB4 118 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 FGD4Q96M96 766 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 FMO2Q99518 471 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 SNX24Q9Y343 169 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 NUB1Q9Y5A7 615 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 CAPN7Q9Y6W3 813 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 UMODL1Q5DID0 1318 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 CXCL11O14625 94 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 MSCO60682 206 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 CYP1A1P04798 512 aaPredicted RBP17.05■□□□□ 0.32
VARS2-207ENST00000476162 SRGAP2CP0DJJ0 459 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 SSTR3P32745 418 aaPredicted RBP17.05■□□□□ 0.32
VARS2-207ENST00000476162 TNFSF9P41273 254 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 ATP1A2P50993 1020 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 SKOR1P84550 965 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 LLGL1Q15334 1064 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 ZPBP2Q6X784 338 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 ZBTB33Q86T24 672 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 GPR20Q99678 358 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 TCHPQ9BT92 498 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 AVENQ9NQS1 362 aaPredicted RBP17.05■□□□□ 0.32
VARS2-207ENST00000476162 RNF181Q9P0P0 153 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 RBPJLQ9UBG7 517 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 PCYOX1Q9UHG3 505 aa17.05■□□□□ 0.32
VARS2-207ENST00000476162 MROH7Q68CQ1 1323 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 ATXN2Q99700 1313 aaKnown RBP17.04■□□□□ 0.32
VARS2-207ENST00000476162 CHUKO15111 745 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 SLC25A27O95847 323 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 CLTAP09496 248 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 RARAP10276 462 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 NSFP46459 744 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms