RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 SMYD5Q6GMV2 418 aa13.18□□□□□ -0.3
MRPL55-227ENST00000475832 TWF2Q6IBS0 349 aaKnown RBP13.18□□□□□ -0.3
MRPL55-227ENST00000475832 TMEM139Q8IV31 216 aa13.18□□□□□ -0.3
MRPL55-227ENST00000475832 PPM1KQ8N3J5 372 aa13.18□□□□□ -0.3
MRPL55-227ENST00000475832 CAGE1Q8TC20 777 aa13.18□□□□□ -0.3
MRPL55-227ENST00000475832 TAS1R2Q8TE23 839 aa13.18□□□□□ -0.3
MRPL55-227ENST00000475832 TAF4BQ92750 862 aa13.18□□□□□ -0.3
MRPL55-227ENST00000475832 NHEJ1Q9H9Q4 299 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-227ENST00000475832 SIX2Q9NPC8 291 aa13.18□□□□□ -0.3
MRPL55-227ENST00000475832 KCND1Q9NSA2 647 aa13.18□□□□□ -0.3
MRPL55-227ENST00000475832 TRMT13Q9NUP7 481 aaKnown RBP13.18□□□□□ -0.3
MRPL55-227ENST00000475832 AIPL1Q9NZN9 384 aa13.18□□□□□ -0.3
MRPL55-227ENST00000475832 ATP11BQ9Y2G3 1177 aa13.18□□□□□ -0.3
MRPL55-227ENST00000475832 DERAQ9Y315 318 aa13.18□□□□□ -0.3
MRPL55-227ENST00000475832 NOC2LQ9Y3T9 749 aaKnown RBP13.18□□□□□ -0.3
MRPL55-227ENST00000475832 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-227ENST00000475832 EPN1Q9Y6I3 576 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-227ENST00000475832 KAT6AQ92794 2004 aa13.17□□□□□ -0.3
MRPL55-227ENST00000475832 SSU72P8A0A1W2PR75 194 aa13.17□□□□□ -0.3
MRPL55-227ENST00000475832 LACTBL1A8MY62 500 aa13.17□□□□□ -0.3
MRPL55-227ENST00000475832 SKIP12755 728 aa13.17□□□□□ -0.3
MRPL55-227ENST00000475832 TBXAS1P24557 533 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-227ENST00000475832 SOX5P35711 763 aa13.17□□□□□ -0.3
MRPL55-227ENST00000475832 MGAT3Q09327 533 aa13.17□□□□□ -0.3
MRPL55-227ENST00000475832 NCOA4Q13772 614 aa13.17□□□□□ -0.3
MRPL55-227ENST00000475832 DRAP1Q14919 205 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-227ENST00000475832 TMEM132DQ14C87 1099 aa13.17□□□□□ -0.3
MRPL55-227ENST00000475832 ARHGAP44Q17R89 818 aa13.17□□□□□ -0.3
MRPL55-227ENST00000475832 SGSM1Q2NKQ1 1148 aa13.17□□□□□ -0.3
MRPL55-227ENST00000475832 TDRD10Q5VZ19 366 aaKnown RBP13.17□□□□□ -0.3
MRPL55-227ENST00000475832 LMBRD2Q68DH5 695 aaPredicted RBP13.17□□□□□ -0.3
MRPL55-227ENST00000475832 C15orf39Q6ZRI6 1047 aa13.17□□□□□ -0.3
MRPL55-227ENST00000475832 TRAPPC11Q7Z392 1133 aa13.17□□□□□ -0.3
MRPL55-227ENST00000475832 FAM228AQ86W67 206 aa13.17□□□□□ -0.3
MRPL55-227ENST00000475832 CCAR2Q8N163 923 aaKnown RBP13.17□□□□□ -0.3
MRPL55-227ENST00000475832 LMO3Q8TAP4 145 aa13.17□□□□□ -0.3
MRPL55-227ENST00000475832 TMEM40Q8WWA1 233 aa13.17□□□□□ -0.3
MRPL55-227ENST00000475832 ZNF516Q92618 1163 aa13.17□□□□□ -0.3
MRPL55-227ENST00000475832 JAKMIP2Q96AA8 810 aa13.17□□□□□ -0.3
MRPL55-227ENST00000475832 ST3GAL5Q9UNP4 418 aa13.17□□□□□ -0.3
MRPL55-227ENST00000475832 C2CD2Q9Y426 696 aa13.17□□□□□ -0.3
MRPL55-227ENST00000475832 SCN10AQ9Y5Y9 1956 aa13.17□□□□□ -0.3
MRPL55-227ENST00000475832 TRIM43BA6NCK2 446 aa13.16□□□□□ -0.3
MRPL55-227ENST00000475832 EIF3CLB5ME19 914 aaKnown RBP13.16□□□□□ -0.3
MRPL55-227ENST00000475832 F8VZ95 297 aa13.16□□□□□ -0.3
MRPL55-227ENST00000475832 KIF2AO00139 706 aaPredicted RBP13.16□□□□□ -0.3
MRPL55-227ENST00000475832 NDUFA10O95299 355 aa13.16□□□□□ -0.3
MRPL55-227ENST00000475832 CHRNA1P02708 482 aa13.16□□□□□ -0.3
MRPL55-227ENST00000475832 TUBB4AP04350 444 aa13.16□□□□□ -0.3
MRPL55-227ENST00000475832 P4HA1P13674 534 aa13.16□□□□□ -0.3
MRPL55-227ENST00000475832 RAB27AP51159 221 aa13.16□□□□□ -0.3
MRPL55-227ENST00000475832 JAM2P57087 298 aa13.16□□□□□ -0.3
MRPL55-227ENST00000475832 YWHAEP62258 255 aaKnown RBP13.16□□□□□ -0.3
MRPL55-227ENST00000475832 GCNT1Q02742 428 aa13.16□□□□□ -0.3
MRPL55-227ENST00000475832 ARID5AQ03989 594 aa13.16□□□□□ -0.3
MRPL55-227ENST00000475832 FAAP100Q0VG06 881 aa13.16□□□□□ -0.3
MRPL55-227ENST00000475832 DNTTIP2Q5QJE6 756 aaKnown RBP13.16□□□□□ -0.3
MRPL55-227ENST00000475832 PHLDB3Q6NSJ2 640 aa13.16□□□□□ -0.3
MRPL55-227ENST00000475832 FAM126BQ8IXS8 530 aa13.16□□□□□ -0.3
MRPL55-227ENST00000475832 CEP120Q8N960 986 aa13.16□□□□□ -0.3
MRPL55-227ENST00000475832 BEST2Q8NFU1 509 aa13.16□□□□□ -0.3
MRPL55-227ENST00000475832 TRIM43Q96BQ3 446 aaPredicted RBP13.16□□□□□ -0.3
MRPL55-227ENST00000475832 EIF3CQ99613 913 aaKnown RBP13.16□□□□□ -0.3
MRPL55-227ENST00000475832 CHP1Q99653 195 aa13.16□□□□□ -0.3
MRPL55-227ENST00000475832 MTMR12Q9C0I1 747 aa13.16□□□□□ -0.3
MRPL55-227ENST00000475832 SNTG2Q9NY99 539 aa13.16□□□□□ -0.3
MRPL55-227ENST00000475832 PARP2Q9UGN5 583 aa13.16□□□□□ -0.3
MRPL55-227ENST00000475832 PPP2R2CQ9Y2T4 447 aa13.16□□□□□ -0.3
MRPL55-227ENST00000475832 KIAA0355O15063 1070 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 PQBP1O60828 265 aaKnown RBP13.15□□□□□ -0.3
MRPL55-227ENST00000475832 GFPT2O94808 682 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 CD4P01730 458 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 KRT19P08727 400 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 CLTBP09497 229 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 FOSL2P15408 326 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 ATF7P17544 494 aaPredicted RBP13.15□□□□□ -0.3
MRPL55-227ENST00000475832 ATICP31939 592 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 EIF4A3P38919 411 aaKnown RBP13.15□□□□□ -0.3
MRPL55-227ENST00000475832 USP8P40818 1118 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 PRKCIP41743 596 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 BPIFB4P59827 614 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 RBP5P82980 135 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 APBA1Q02410 837 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 MAPK8IP2Q13387 824 aaPredicted RBP13.15□□□□□ -0.3
MRPL55-227ENST00000475832 SLC10A6Q3KNW5 377 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 FBXO47Q5MNV8 452 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 JADE1Q6IE81 842 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 DPY19L2P1Q6NXN4 242 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 GJB7Q6PEY0 223 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 WDR59Q6PJI9 974 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 RAD9BQ6WBX8 426 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 KIAA1328Q86T90 577 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 OR5B17Q8NGF7 314 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 SEMA4DQ92854 862 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 PGBD4Q96DM1 585 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 KIF12Q96FN5 646 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 FAXDC2Q96IV6 333 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.15□□□□□ -0.3
MRPL55-227ENST00000475832 APOL6Q9BWW8 343 aa13.15□□□□□ -0.3
MRPL55-227ENST00000475832 EIF2AQ9BY44 585 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms