RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 ZNF618Q5T7W0 954 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 GBP6Q6ZN66 633 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 TRIM50Q86XT4 487 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 HACE1Q8IYU2 909 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 TXLNBQ8N3L3 684 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 OR8K1Q8NGG5 319 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 ASAP3Q8TDY4 903 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 CACTINQ8WUQ7 758 aaKnown RBP7.61□□□□□ -1.19
SHQ1-207ENST00000475558 NLRP7Q8WX94 980 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 SYN2Q92777 582 aaPredicted RBP7.61□□□□□ -1.19
SHQ1-207ENST00000475558 PCMTD1Q96MG8 357 aaPredicted RBP7.61□□□□□ -1.19
SHQ1-207ENST00000475558 SCLT1Q96NL6 688 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 PANX2Q96RD6 677 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 FNBP1Q96RU3 617 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 ACO2Q99798 780 aaKnown RBP7.61□□□□□ -1.19
SHQ1-207ENST00000475558 SH2D3AQ9BRG2 576 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 PLEKHA5Q9HAU0 1116 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 PLCB1Q9NQ66 1216 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 TSR3Q9UJK0 312 aaKnown RBP7.61□□□□□ -1.19
SHQ1-207ENST00000475558 USP20Q9Y2K6 914 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 R3HCC1Q9Y3T6 440 aaKnown RBP7.61□□□□□ -1.19
SHQ1-207ENST00000475558 TELO2Q9Y4R8 837 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 BZW2Q9Y6E2 419 aaKnown RBP7.61□□□□□ -1.19
SHQ1-207ENST00000475558 MYO7AQ13402 2215 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 MICAL3Q7RTP6 2002 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 KIAA1217Q5T5P2 1943 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 H3BNC9 293 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 H3BQ06 376 aaPredicted RBP7.6□□□□□ -1.19
SHQ1-207ENST00000475558 OGTO15294 1046 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 ZC3H11AO75152 810 aaKnown RBP eCLIP7.6□□□□□ -1.19
SHQ1-207ENST00000475558 AKAP3O75969 853 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 CLTAP09496 248 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 ZNF286BP0CG31 522 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 TRIM21P19474 475 aaKnown RBP7.6□□□□□ -1.19
SHQ1-207ENST00000475558 PAX3P23760 479 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 PBX1P40424 430 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 GPC3P51654 580 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 CLDN10P78369 228 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 ZP2Q05996 745 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 KCNA1Q09470 495 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 BFSP1Q12934 665 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 TBX2Q13207 712 aaPredicted RBP7.6□□□□□ -1.19
SHQ1-207ENST00000475558 GPM6BQ13491 265 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 MBTPS1Q14703 1052 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 COL19A1Q14993 1142 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 LAPTM4AQ15012 233 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 SNRNP35Q16560 246 aaKnown RBP7.6□□□□□ -1.19
SHQ1-207ENST00000475558 EXOC3L4Q17RC7 722 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 DCAF4L1Q3SXM0 396 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 ATF7IP2Q5U623 682 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 TRAF7Q6Q0C0 670 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 MPZL3Q6UWV2 235 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.6□□□□□ -1.19
SHQ1-207ENST00000475558 EP400NLQ6ZTU2 488 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 ENOSF1Q7L5Y1 443 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 APTXQ7Z2E3 356 aaKnown RBP7.6□□□□□ -1.19
SHQ1-207ENST00000475558 CCDC186Q7Z3E2 898 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 TMC6Q7Z403 805 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 TMTC1Q8IUR5 882 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 LRRC8AQ8IWT6 810 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 ADHFE1Q8IWW8 467 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 LRRC71Q8N4P6 559 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 DBF4BQ8NFT6 615 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 NEK11Q8NG66 645 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 LMBR1Q8WVP7 490 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 RSPH1Q8WYR4 309 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 BSNDQ8WZ55 320 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 JAKMIP2Q96AA8 810 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 BORCS6Q96GS4 357 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 NLRP4Q96MN2 994 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 YME1L1Q96TA2 773 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 POP1Q99575 1024 aaKnown RBP7.6□□□□□ -1.19
SHQ1-207ENST00000475558 MSTO1Q9BUK6 570 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 CELF4Q9BZC1 486 aaKnown RBP7.6□□□□□ -1.19
SHQ1-207ENST00000475558 DNAI2Q9GZS0 605 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 CCDC113Q9H0I3 377 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 FAM124BQ9H5Z6 455 aaPredicted RBP7.6□□□□□ -1.19
SHQ1-207ENST00000475558 NSUN3Q9H649 340 aaKnown RBP7.6□□□□□ -1.19
SHQ1-207ENST00000475558 ASB7Q9H672 318 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 IFT122Q9HBG6 1241 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 POLD4Q9HCU8 107 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 TAB2Q9NYJ8 693 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 CAPN11Q9UMQ6 739 aa7.6□□□□□ -1.19
SHQ1-207ENST00000475558 ZNF318Q5VUA4 2279 aa7.59□□□□□ -1.19
SHQ1-207ENST00000475558 A0A087WZ62 844 aa7.59□□□□□ -1.19
SHQ1-207ENST00000475558 AP5Z1O43299 807 aa7.59□□□□□ -1.19
SHQ1-207ENST00000475558 XPOTO43592 962 aaKnown RBP7.59□□□□□ -1.19
SHQ1-207ENST00000475558 GPR32O75388 356 aa7.59□□□□□ -1.19
SHQ1-207ENST00000475558 DARSP14868 501 aaKnown RBP7.59□□□□□ -1.19
SHQ1-207ENST00000475558 ZSCAN20P17040 1043 aaPredicted RBP7.59□□□□□ -1.19
SHQ1-207ENST00000475558 PROZP22891 400 aa7.59□□□□□ -1.19
SHQ1-207ENST00000475558 MSNP26038 577 aaKnown RBP7.59□□□□□ -1.19
SHQ1-207ENST00000475558 ANXA13P27216 316 aa7.59□□□□□ -1.19
SHQ1-207ENST00000475558 ADSSP30520 456 aa7.59□□□□□ -1.19
SHQ1-207ENST00000475558 THPOP40225 353 aa7.59□□□□□ -1.19
SHQ1-207ENST00000475558 CYP2J2P51589 502 aa7.59□□□□□ -1.19
SHQ1-207ENST00000475558 CLCN3P51790 818 aa7.59□□□□□ -1.19
SHQ1-207ENST00000475558 ZBED6P86452 979 aa7.59□□□□□ -1.19
SHQ1-207ENST00000475558 CDK17Q00537 523 aa7.59□□□□□ -1.19
SHQ1-207ENST00000475558 MBTD1Q05BQ5 628 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms