RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 ZFP14Q9HCL3 533 aa22.49■■□□□ 1.19
VPS36-203ENST00000475375 POLD4Q9HCU8 107 aa22.49■■□□□ 1.19
VPS36-203ENST00000475375 ARHGEF37A1IGU5 675 aa22.48■■□□□ 1.19
VPS36-203ENST00000475375 DCDC2BA2VCK2 349 aa22.48■■□□□ 1.19
VPS36-203ENST00000475375 PPP2R5DQ14738 602 aa22.48■■□□□ 1.19
VPS36-203ENST00000475375 LPAL2Q16609 132 aa22.48■■□□□ 1.19
VPS36-203ENST00000475375 CD300LGQ6UXG3 332 aa22.48■■□□□ 1.19
VPS36-203ENST00000475375 PDZD4Q76G19 769 aaPredicted RBP22.48■■□□□ 1.19
VPS36-203ENST00000475375 ZNF461Q8TAF7 563 aa22.48■■□□□ 1.19
VPS36-203ENST00000475375 TCEAL4Q96EI5 215 aa22.48■■□□□ 1.19
VPS36-203ENST00000475375 POLR3CQ9BUI4 534 aaPredicted RBP22.48■■□□□ 1.19
VPS36-203ENST00000475375 TRMT61BQ9BVS5 477 aaKnown RBP22.48■■□□□ 1.19
VPS36-203ENST00000475375 AVENQ9NQS1 362 aaPredicted RBP22.48■■□□□ 1.19
VPS36-203ENST00000475375 SMIM28A0A1B0GU29 152 aa22.47■■□□□ 1.19
VPS36-203ENST00000475375 ZNF197O14709 1029 aa22.47■■□□□ 1.19
VPS36-203ENST00000475375 NRLP54845 237 aa22.47■■□□□ 1.19
VPS36-203ENST00000475375 OSTNP61366 133 aa22.47■■□□□ 1.19
VPS36-203ENST00000475375 FZD5Q13467 585 aa22.47■■□□□ 1.19
VPS36-203ENST00000475375 FAM78AQ5JUQ0 283 aa22.47■■□□□ 1.19
VPS36-203ENST00000475375 NT5DC1Q5TFE4 455 aa22.47■■□□□ 1.19
VPS36-203ENST00000475375 SLC8B1Q6J4K2 584 aa22.47■■□□□ 1.19
VPS36-203ENST00000475375 POTEHQ6S545 545 aa22.47■■□□□ 1.19
VPS36-203ENST00000475375 ELMOD1Q8N336 334 aa22.47■■□□□ 1.19
VPS36-203ENST00000475375 RTKNQ9BST9 563 aa22.47■■□□□ 1.19
VPS36-203ENST00000475375 CCDC94Q9BW85 323 aaPredicted RBP22.47■■□□□ 1.19
VPS36-203ENST00000475375 TOPORSQ9NS56 1045 aaPredicted RBP22.47■■□□□ 1.19
VPS36-203ENST00000475375 ACACBO00763 2458 aa22.46■■□□□ 1.19
VPS36-203ENST00000475375 WDR27A2RRH5 827 aa22.46■■□□□ 1.19
VPS36-203ENST00000475375 KRT37O76014 449 aa22.46■■□□□ 1.19
VPS36-203ENST00000475375 FCARP24071 287 aa22.46■■□□□ 1.19
VPS36-203ENST00000475375 PRSS36Q5K4E3 855 aa22.46■■□□□ 1.19
VPS36-203ENST00000475375 CYP4A22Q5TCH4 519 aa22.46■■□□□ 1.19
VPS36-203ENST00000475375 IRF7Q92985 503 aa22.46■■□□□ 1.19
VPS36-203ENST00000475375 CHRDQ9H2X0 955 aa22.46■■□□□ 1.19
VPS36-203ENST00000475375 NUB1Q9Y5A7 615 aa22.46■■□□□ 1.19
VPS36-203ENST00000475375 H7C4K7 107 aa22.45■■□□□ 1.18
VPS36-203ENST00000475375 K7ERI5 159 aa22.45■■□□□ 1.18
VPS36-203ENST00000475375 PODXLO00592 558 aa22.45■■□□□ 1.18
VPS36-203ENST00000475375 ABLIM3O94929 683 aa22.45■■□□□ 1.18
VPS36-203ENST00000475375 ATF2P15336 505 aa22.45■■□□□ 1.18
VPS36-203ENST00000475375 RPA1P27694 616 aa22.45■■□□□ 1.18
VPS36-203ENST00000475375 GDI1P31150 447 aa22.45■■□□□ 1.18
VPS36-203ENST00000475375 SOX4Q06945 474 aaPredicted RBP22.45■■□□□ 1.18
VPS36-203ENST00000475375 PRR23BQ6ZRT6 265 aa22.45■■□□□ 1.18
VPS36-203ENST00000475375 TCEAL8Q8IYN2 117 aa22.45■■□□□ 1.18
VPS36-203ENST00000475375 FAM3CQ92520 227 aa22.45■■□□□ 1.18
VPS36-203ENST00000475375 KIFAP3Q92845 792 aa22.45■■□□□ 1.18
VPS36-203ENST00000475375 GTF3C6Q969F1 213 aa22.45■■□□□ 1.18
VPS36-203ENST00000475375 ASB16Q96NS5 453 aa22.45■■□□□ 1.18
VPS36-203ENST00000475375 LMAN1LQ9HAT1 526 aa22.45■■□□□ 1.18
VPS36-203ENST00000475375 PARD6AQ9NPB6 346 aa22.45■■□□□ 1.18
VPS36-203ENST00000475375 SLC38A7Q9NVC3 462 aa22.45■■□□□ 1.18
VPS36-203ENST00000475375 INSL5Q9Y5Q6 135 aa22.45■■□□□ 1.18
VPS36-203ENST00000475375 SHISA7A6NL88 538 aa22.44■■□□□ 1.18
VPS36-203ENST00000475375 SEC24AO95486 1093 aa22.44■■□□□ 1.18
VPS36-203ENST00000475375 SPEM2Q0P670 501 aa22.44■■□□□ 1.18
VPS36-203ENST00000475375 ME3Q16798 604 aa22.44■■□□□ 1.18
VPS36-203ENST00000475375 ZNF568Q3ZCX4 644 aa22.44■■□□□ 1.18
VPS36-203ENST00000475375 IQCEQ6IPM2 695 aa22.44■■□□□ 1.18
VPS36-203ENST00000475375 CEP120Q8N960 986 aa22.44■■□□□ 1.18
VPS36-203ENST00000475375 DAXXQ9UER7 740 aaPredicted RBP22.44■■□□□ 1.18
VPS36-203ENST00000475375 TNFSF13BQ9Y275 285 aa22.44■■□□□ 1.18
VPS36-203ENST00000475375 PIAS3Q9Y6X2 628 aa22.44■■□□□ 1.18
VPS36-203ENST00000475375 F5P12259 2224 aa22.43■■□□□ 1.18
VPS36-203ENST00000475375 CCDC169A6NNP5 214 aa22.43■■□□□ 1.18
VPS36-203ENST00000475375 SYN3O14994 580 aa22.43■■□□□ 1.18
VPS36-203ENST00000475375 JAK2O60674 1132 aa22.43■■□□□ 1.18
VPS36-203ENST00000475375 LARGE1O95461 756 aa22.43■■□□□ 1.18
VPS36-203ENST00000475375 OR52Z1P0C646 297 aa22.43■■□□□ 1.18
VPS36-203ENST00000475375 MYL4P12829 197 aa22.43■■□□□ 1.18
VPS36-203ENST00000475375 PSMC3P17980 439 aa22.43■■□□□ 1.18
VPS36-203ENST00000475375 TGM1P22735 817 aa22.43■■□□□ 1.18
VPS36-203ENST00000475375 GRM5P41594 1212 aa22.43■■□□□ 1.18
VPS36-203ENST00000475375 CCR2P41597 374 aa22.43■■□□□ 1.18
VPS36-203ENST00000475375 CCR3P51677 355 aa22.43■■□□□ 1.18
VPS36-203ENST00000475375 SAFBQ15424 915 aaKnown RBP eCLIP22.43■■□□□ 1.18
VPS36-203ENST00000475375 CTXN3Q4LDR2 81 aa22.43■■□□□ 1.18
VPS36-203ENST00000475375 HAUS3Q68CZ6 603 aa22.43■■□□□ 1.18
VPS36-203ENST00000475375 LAIR1Q6GTX8 287 aa22.43■■□□□ 1.18
VPS36-203ENST00000475375 CELF5Q8N6W0 485 aaKnown RBP22.43■■□□□ 1.18
VPS36-203ENST00000475375 NSUN7Q8NE18 718 aaKnown RBP22.43■■□□□ 1.18
VPS36-203ENST00000475375 SMARCD2Q92925 531 aa22.43■■□□□ 1.18
VPS36-203ENST00000475375 ZNF512Q96ME7 567 aaPredicted RBP22.43■■□□□ 1.18
VPS36-203ENST00000475375 IER2Q9BTL4 223 aa22.43■■□□□ 1.18
VPS36-203ENST00000475375 CDT1Q9H211 546 aa22.43■■□□□ 1.18
VPS36-203ENST00000475375 BHMT2Q9H2M3 363 aa22.43■■□□□ 1.18
VPS36-203ENST00000475375 ZNF334Q9HCZ1 680 aaPredicted RBP22.43■■□□□ 1.18
VPS36-203ENST00000475375 MICAL2O94851 1124 aa22.42■■□□□ 1.18
VPS36-203ENST00000475375 CCT6AP40227 531 aaKnown RBP22.42■■□□□ 1.18
VPS36-203ENST00000475375 VIPR2P41587 438 aa22.42■■□□□ 1.18
VPS36-203ENST00000475375 GUCY1B3Q02153 619 aa22.42■■□□□ 1.18
VPS36-203ENST00000475375 ZNF174Q15697 407 aa22.42■■□□□ 1.18
VPS36-203ENST00000475375 VITQ6UXI7 678 aa22.42■■□□□ 1.18
VPS36-203ENST00000475375 HS6ST3Q8IZP7 471 aa22.42■■□□□ 1.18
VPS36-203ENST00000475375 ZNF687Q8N1G0 1237 aa22.42■■□□□ 1.18
VPS36-203ENST00000475375 ZSWIM3Q96MP5 696 aa22.42■■□□□ 1.18
VPS36-203ENST00000475375 TCHPQ9BT92 498 aa22.42■■□□□ 1.18
VPS36-203ENST00000475375 SLITRK6Q9H5Y7 841 aa22.42■■□□□ 1.18
VPS36-203ENST00000475375 FBXL5Q9UKA1 691 aa22.42■■□□□ 1.18
VPS36-203ENST00000475375 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms