RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 ZBED4O75132 1171 aa22.62■■□□□ 1.21
SH3D21-202ENST00000474766 TMEM253P0C7T8 217 aa22.62■■□□□ 1.21
SH3D21-202ENST00000474766 FDX1P10109 184 aa22.62■■□□□ 1.21
SH3D21-202ENST00000474766 PLS3P13797 630 aa22.62■■□□□ 1.21
SH3D21-202ENST00000474766 LMNB2Q03252 620 aa22.62■■□□□ 1.21
SH3D21-202ENST00000474766 NBPF20Q3BBV1 942 aa22.62■■□□□ 1.21
SH3D21-202ENST00000474766 TNFAIP8L3Q5GJ75 292 aa22.62■■□□□ 1.21
SH3D21-202ENST00000474766 PHLDB3Q6NSJ2 640 aa22.62■■□□□ 1.21
SH3D21-202ENST00000474766 INTS8Q75QN2 995 aaKnown RBP22.62■■□□□ 1.21
SH3D21-202ENST00000474766 ELAC2Q9BQ52 826 aaKnown RBP22.62■■□□□ 1.21
SH3D21-202ENST00000474766 CELF4Q9BZC1 486 aaKnown RBP22.62■■□□□ 1.21
SH3D21-202ENST00000474766 LRRC4CQ9HCJ2 640 aa22.62■■□□□ 1.21
SH3D21-202ENST00000474766 RAVER2Q9HCJ3 691 aaKnown RBP22.62■■□□□ 1.21
SH3D21-202ENST00000474766 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.62■■□□□ 1.21
SH3D21-202ENST00000474766 SNX3O60493 162 aa22.62■■□□□ 1.21
SH3D21-202ENST00000474766 CCNG1P51959 295 aa22.62■■□□□ 1.21
SH3D21-202ENST00000474766 FCGRTP55899 365 aa22.62■■□□□ 1.21
SH3D21-202ENST00000474766 DR1Q01658 176 aa22.62■■□□□ 1.21
SH3D21-202ENST00000474766 PPARDQ03181 441 aa22.62■■□□□ 1.21
SH3D21-202ENST00000474766 MTMR1Q13613 665 aa22.62■■□□□ 1.21
SH3D21-202ENST00000474766 CDCA2Q69YH5 1023 aaPredicted RBP22.62■■□□□ 1.21
SH3D21-202ENST00000474766 CPXCR1Q8N123 301 aa22.62■■□□□ 1.21
SH3D21-202ENST00000474766 ACCSQ96QU6 501 aa22.62■■□□□ 1.21
SH3D21-202ENST00000474766 CARD9Q9H257 536 aa22.62■■□□□ 1.21
SH3D21-202ENST00000474766 P4HA2O15460 535 aa22.61■■□□□ 1.21
SH3D21-202ENST00000474766 ALAS1P13196 640 aa22.61■■□□□ 1.21
SH3D21-202ENST00000474766 KRT13P13646 458 aa22.61■■□□□ 1.21
SH3D21-202ENST00000474766 MCCD1P59942 119 aaPredicted RBP22.61■■□□□ 1.21
SH3D21-202ENST00000474766 NCALDP61601 193 aa22.61■■□□□ 1.21
SH3D21-202ENST00000474766 MKRN4PQ13434 485 aaPredicted RBP22.61■■□□□ 1.21
SH3D21-202ENST00000474766 NAIF1Q69YI7 327 aaPredicted RBP22.61■■□□□ 1.21
SH3D21-202ENST00000474766 DAAM2Q86T65 1068 aa22.61■■□□□ 1.21
SH3D21-202ENST00000474766 EGFL6Q8IUX8 553 aa22.61■■□□□ 1.21
SH3D21-202ENST00000474766 RFFLQ8WZ73 363 aa22.61■■□□□ 1.21
SH3D21-202ENST00000474766 THOC1Q96FV9 657 aaKnown RBP22.61■■□□□ 1.21
SH3D21-202ENST00000474766 TIPINQ9BVW5 301 aa22.61■■□□□ 1.21
SH3D21-202ENST00000474766 SPATC1LQ9H0A9 340 aa22.61■■□□□ 1.21
SH3D21-202ENST00000474766 RASAL2Q9UJF2 1139 aa22.61■■□□□ 1.21
SH3D21-202ENST00000474766 ATP2A1O14983 1001 aa22.6■■□□□ 1.21
SH3D21-202ENST00000474766 FGGP02679 453 aa22.6■■□□□ 1.21
SH3D21-202ENST00000474766 SHBGP04278 402 aa22.6■■□□□ 1.21
SH3D21-202ENST00000474766 RARAP10276 462 aa22.6■■□□□ 1.21
SH3D21-202ENST00000474766 GTF2BQ00403 316 aa22.6■■□□□ 1.21
SH3D21-202ENST00000474766 PLS1Q14651 629 aa22.6■■□□□ 1.21
SH3D21-202ENST00000474766 TAOK1Q7L7X3 1001 aa22.6■■□□□ 1.21
SH3D21-202ENST00000474766 RDH13Q8NBN7 331 aa22.6■■□□□ 1.21
SH3D21-202ENST00000474766 IFT74Q96LB3 600 aa22.6■■□□□ 1.21
SH3D21-202ENST00000474766 TRIM51Q9BSJ1 452 aa22.6■■□□□ 1.21
SH3D21-202ENST00000474766 SLC24A3Q9HC58 644 aa22.6■■□□□ 1.21
SH3D21-202ENST00000474766 PARP2Q9UGN5 583 aa22.6■■□□□ 1.21
SH3D21-202ENST00000474766 CORO1CQ9ULV4 474 aaPredicted RBP22.6■■□□□ 1.21
SH3D21-202ENST00000474766 RIPK3Q9Y572 518 aa22.6■■□□□ 1.21
SH3D21-202ENST00000474766 O00370 1275 aa22.6■■□□□ 1.21
SH3D21-202ENST00000474766 MAPK13O15264 365 aa22.6■■□□□ 1.21
SH3D21-202ENST00000474766 LUC7L3O95232 432 aaKnown RBP22.6■■□□□ 1.21
SH3D21-202ENST00000474766 CCNHP51946 323 aaPredicted RBP22.6■■□□□ 1.21
SH3D21-202ENST00000474766 SNRPFP62306 86 aaKnown RBP22.6■■□□□ 1.21
SH3D21-202ENST00000474766 DLG4P78352 724 aa22.6■■□□□ 1.21
SH3D21-202ENST00000474766 MAEAQ7L5Y9 396 aa22.6■■□□□ 1.21
SH3D21-202ENST00000474766 C4orf19Q8IY42 314 aa22.6■■□□□ 1.21
SH3D21-202ENST00000474766 TAAR1Q96RJ0 339 aa22.6■■□□□ 1.21
SH3D21-202ENST00000474766 MCOLN1Q9GZU1 580 aa22.6■■□□□ 1.21
SH3D21-202ENST00000474766 AGAP1Q9UPQ3 857 aa22.6■■□□□ 1.21
SH3D21-202ENST00000474766 USP15Q9Y4E8 981 aaPredicted RBP22.6■■□□□ 1.21
SH3D21-202ENST00000474766 TNPO2O14787 897 aaKnown RBP22.59■■□□□ 1.21
SH3D21-202ENST00000474766 SMNDC1O75940 238 aaKnown RBP eCLIP22.59■■□□□ 1.215e-6■■■■□ 22.7
SH3D21-202ENST00000474766 VIMP08670 466 aaKnown RBP22.59■■□□□ 1.21
SH3D21-202ENST00000474766 YWHABP31946 246 aaKnown RBP22.59■■□□□ 1.21
SH3D21-202ENST00000474766 RPS6P62753 249 aaKnown RBP22.59■■□□□ 1.21
SH3D21-202ENST00000474766 BNIP1Q12981 228 aa22.59■■□□□ 1.21
SH3D21-202ENST00000474766 PGM5Q15124 567 aa22.59■■□□□ 1.21
SH3D21-202ENST00000474766 FAM133BQ5BKY9 247 aaKnown RBP22.59■■□□□ 1.21
SH3D21-202ENST00000474766 SLC35G2Q8TBE7 412 aa22.59■■□□□ 1.21
SH3D21-202ENST00000474766 VTI1AQ96AJ9 217 aa22.59■■□□□ 1.21
SH3D21-202ENST00000474766 RNF25Q96BH1 459 aaPredicted RBP22.59■■□□□ 1.21
SH3D21-202ENST00000474766 PRMT1Q99873 361 aaKnown RBP22.59■■□□□ 1.21
SH3D21-202ENST00000474766 AZI2Q9H6S1 392 aa22.59■■□□□ 1.21
SH3D21-202ENST00000474766 SLC5A4Q9NY91 659 aa22.59■■□□□ 1.21
SH3D21-202ENST00000474766 EMSYQ7Z589 1322 aa22.59■■□□□ 1.21
SH3D21-202ENST00000474766 TISP43B9A030 160 aa22.58■■□□□ 1.21
SH3D21-202ENST00000474766 FOXN3O00409 490 aaPredicted RBP22.58■■□□□ 1.21
SH3D21-202ENST00000474766 GCKP35557 465 aa22.58■■□□□ 1.21
SH3D21-202ENST00000474766 VAMP7P51809 220 aa22.58■■□□□ 1.21
SH3D21-202ENST00000474766 OAZ1P54368 228 aa22.58■■□□□ 1.21
SH3D21-202ENST00000474766 C1orf220Q5T0J3 134 aa22.58■■□□□ 1.21
SH3D21-202ENST00000474766 MFSD5Q6N075 450 aa22.58■■□□□ 1.21
SH3D21-202ENST00000474766 SPDL1Q96EA4 605 aa22.58■■□□□ 1.21
SH3D21-202ENST00000474766 ZNF570Q96NI8 536 aa22.58■■□□□ 1.21
SH3D21-202ENST00000474766 CBWD1Q9BRT8 395 aa22.58■■□□□ 1.21
SH3D21-202ENST00000474766 PCIF1Q9H4Z3 704 aa22.58■■□□□ 1.21
SH3D21-202ENST00000474766 SPATS2LQ9NUQ6 558 aaKnown RBP22.58■■□□□ 1.21
SH3D21-202ENST00000474766 ABCF3Q9NUQ8 709 aa22.58■■□□□ 1.21
SH3D21-202ENST00000474766 GABRQQ9UN88 632 aa22.58■■□□□ 1.21
SH3D21-202ENST00000474766 L3MBTL1Q9Y468 752 aa22.58■■□□□ 1.21
SH3D21-202ENST00000474766 PMM2O15305 246 aa22.58■■□□□ 1.2
SH3D21-202ENST00000474766 DDX3YO15523 660 aaKnown RBP22.58■■□□□ 1.2
SH3D21-202ENST00000474766 WFS1O76024 890 aa22.58■■□□□ 1.2
SH3D21-202ENST00000474766 UBOX5O94941 541 aa22.58■■□□□ 1.2
SH3D21-202ENST00000474766 ALDH5A1P51649 535 aaPredicted RBP22.58■■□□□ 1.2
SH3D21-202ENST00000474766 CCNA1P78396 465 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms