RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 OR8H3Q8N146 312 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 TOR1AIP2Q8NFQ8 470 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 BSNDQ8WZ55 320 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 RAPGEF5Q92565 580 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 LRGUKQ96M69 825 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 HS6ST2Q96MM7 605 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 ACAT2Q9BWD1 397 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 TTC12Q9H892 705 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 PSTPIP2Q9H939 334 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 PDE11AQ9HCR9 933 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 ZMYND8Q9ULU4 1186 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 GPSM3Q9Y4H4 160 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 PALLDQ8WX93 1383 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 DNAJC25-GNG10A0A024R161 153 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 GOLGA8BA8MQT2 603 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 TLR3O15455 904 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 RNGTTO60942 597 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 LGR5O75473 907 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 STARD3NLO95772 234 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 EOMESO95936 686 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 EGFRP00533 1210 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 MYCP01106 439 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 HEXBP07686 556 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 ZFYP08048 801 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 PDHBP11177 359 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 HNF1BP35680 557 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 GGCXP38435 758 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 HADHBP55084 474 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 TRIM32Q13049 653 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 SEPT6Q14141 434 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 TEAD4Q15561 434 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 CWF19L2Q2TBE0 894 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 C4orf48Q5BLP8 95 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 ZBTB41Q5SVQ8 909 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 C1orf53Q5VUE5 145 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 NCCRP1Q6ZVX7 275 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 RAB11FIP2Q7L804 512 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 MRPL10Q7Z7H8 261 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 NLRP8Q86W28 1048 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 P3H2Q8IVL5 708 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 OR6P1Q8NGX9 317 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 FAM81AQ8TBF8 368 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 DDX54Q8TDD1 881 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 TRPC4APQ8TEL6 797 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 ZFAND2BQ8WV99 257 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 UCMAQ8WVF2 138 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 ZKSCAN4Q969J2 545 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 NCLNQ969V3 563 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 TUBGCP3Q96CW5 907 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 ZC3H10Q96K80 434 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 ZDHHC15Q96MV8 337 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 CCDC43Q96MW1 224 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 EYA3Q99504 573 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 ESYT1Q9BSJ8 1104 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 AGXT2Q9BYV1 514 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 GLRX2Q9NS18 164 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 ADARB2Q9NS39 739 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 OLA1Q9NTK5 396 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 RTCBQ9Y3I0 505 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 TAF1LQ8IZX4 1826 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 ATRNL1Q5VV63 1379 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 FLT1P17948 1338 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 LRRIQ4A6NIV6 560 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 PDLIM1O00151 329 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 VWA5AO00534 786 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 NVLO15381 856 aaKnown RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 ATP6V1G1O75348 118 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 ZIC2O95409 532 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 SRGAP2BP0DMP2 458 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 ATP1A3P13637 1013 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 RHCEP18577 417 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 HOXA11P31270 313 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 PRKAR2BP31323 418 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 USP14P54578 494 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 DSTNP60981 165 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 SH3BP2P78314 561 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 CBX1P83916 185 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 RHDQ02161 417 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 BTKQ06187 659 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 CUL4BQ13620 913 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 MAPKAPK3Q16644 382 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 ALG11Q2TAA5 492 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 EML3Q32P44 896 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 LRSAM1Q6UWE0 723 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 OLFM4Q6UX06 510 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 KRT73Q86Y46 540 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 RNF10Q8N5U6 811 aaKnown RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 ANKLE1Q8NAG6 615 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 ARRDC4Q8NCT1 418 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 FAM216AQ8WUB2 273 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 LEO1Q8WVC0 666 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 EZH1Q92800 747 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 SGK3Q96BR1 496 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 PPP1R14BQ96C90 147 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 INTS12Q96CB8 462 aaKnown RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 TM9SF3Q9HD45 589 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 ARFGAP3Q9NP61 516 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 SEMA3GQ9NS98 782 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 TBCCD1Q9NVR7 557 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms