RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 SMAD3P84022 425 aaKnown RBP11.23□□□□□ -0.61
CASC3-204ENST00000474190 MYL5Q02045 173 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 BFSP1Q12934 665 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 GRIK3Q13003 919 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 UPP1Q16831 310 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 HSP90AA4PQ58FG1 418 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 SV2AQ7L0J3 742 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 APBB1IPQ7Z5R6 666 aaPredicted RBP11.23□□□□□ -0.61
CASC3-204ENST00000474190 FRMD5Q7Z6J6 570 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 WDR49Q8IV35 697 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 CD302Q8IX05 232 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 LMO3Q8TAP4 145 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 SEMA4DQ92854 862 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 ELMO3Q96BJ8 720 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 CCDC127Q96BQ5 260 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 KIF12Q96FN5 646 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 CNOT6LQ96LI5 555 aaKnown RBP11.23□□□□□ -0.61
CASC3-204ENST00000474190 FAM161BQ96MY7 647 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 YME1L1Q96TA2 773 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 TSG101Q99816 390 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 C17orf80Q9BSJ5 609 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 MTMR12Q9C0I1 747 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 XYLT2Q9H1B5 865 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 LRFN2Q9ULH4 789 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 CASTOR2A6NHX0 329 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 THP07101 528 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 DLATP10515 647 aaKnown RBP11.22□□□□□ -0.61
CASC3-204ENST00000474190 CLCNKBP51801 687 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 YARSP54577 528 aaKnown RBP11.22□□□□□ -0.61
CASC3-204ENST00000474190 PPP2R3AQ06190 1150 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 TUSC3Q13454 348 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 CAMK1Q14012 370 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 BTG3Q14201 252 aaPredicted RBP11.22□□□□□ -0.61
CASC3-204ENST00000474190 TMEM132DQ14C87 1099 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 ZACNQ401N2 412 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 C9orf57Q5W0N0 161 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 INTS8Q75QN2 995 aaKnown RBP11.22□□□□□ -0.61
CASC3-204ENST00000474190 TRAPPC11Q7Z392 1133 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 LIMS2Q7Z4I7 341 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 SLC39A11Q8N1S5 342 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 LRRC43Q8N309 656 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 COLGALT1Q8NBJ5 622 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 FAM200AQ8TCP9 573 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 RSPH1Q8WYR4 309 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 FAM212AQ96EL1 285 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 TSPAN18Q96SJ8 248 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 RBSNQ9H1K0 784 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 MTIF3Q9H2K0 278 aaKnown RBP11.22□□□□□ -0.61
CASC3-204ENST00000474190 NKX2-4Q9H2Z4 354 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 TTYH1Q9H313 450 aaPredicted RBP11.22□□□□□ -0.61
CASC3-204ENST00000474190 DACH1Q9UI36 760 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 FRMD4BQ9Y2L6 1034 aa11.22□□□□□ -0.61
CASC3-204ENST00000474190 NT5C1B-RDH14C9J2C7 533 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 C5orf67F2Z3F1 127 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 NRP1O14786 923 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 PMM2O15305 246 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 LPXNO60711 386 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 KIF4AO95239 1232 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 DNAJB1P25685 340 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 DNAJB2P25686 324 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 BMPR1AP36894 532 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 GCLMP48507 274 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 BCAR1P56945 870 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 ERVK-21P61565 698 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 KRT31Q15323 416 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 TCP11X2Q5H9J9 407 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 TAS1R1Q7RTX1 841 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 NT5DC4Q86YG4 428 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 HACE1Q8IYU2 909 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 TAS1R2Q8TE23 839 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 NOC3LQ8WTT2 800 aaKnown RBP11.21□□□□□ -0.61
CASC3-204ENST00000474190 TMEM175Q9BSA9 504 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 MRPL9Q9BYD2 267 aaKnown RBP11.21□□□□□ -0.61
CASC3-204ENST00000474190 TSPY26PQ9H489 355 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 APOBEC3GQ9HC16 384 aaKnown RBP11.21□□□□□ -0.61
CASC3-204ENST00000474190 KANSL3Q9P2N6 904 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 ARMCX3Q9UH62 379 aaPredicted RBP11.21□□□□□ -0.61
CASC3-204ENST00000474190 LIMA1Q9UHB6 759 aaKnown RBP11.21□□□□□ -0.61
CASC3-204ENST00000474190 RAPGEFL1Q9UHV5 662 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 UBQLN1Q9UMX0 589 aaKnown RBP11.21□□□□□ -0.61
CASC3-204ENST00000474190 COQ4Q9Y3A0 265 aa11.21□□□□□ -0.61
CASC3-204ENST00000474190 KCNJ18B7U540 433 aa11.2□□□□□ -0.62
CASC3-204ENST00000474190 TMEM189-UBE2V1I3L0A0 370 aa11.2□□□□□ -0.62
CASC3-204ENST00000474190 PODXLO00592 558 aa11.2□□□□□ -0.62
CASC3-204ENST00000474190 EPB41P11171 864 aaKnown RBP11.2□□□□□ -0.62
CASC3-204ENST00000474190 COL9A1P20849 921 aa11.2□□□□□ -0.62
CASC3-204ENST00000474190 GTF2H1P32780 548 aa11.2□□□□□ -0.62
CASC3-204ENST00000474190 TFAMQ00059 246 aaKnown RBP11.2□□□□□ -0.62
CASC3-204ENST00000474190 KCNJ12Q14500 433 aa11.2□□□□□ -0.62
CASC3-204ENST00000474190 DUOXA2Q1HG44 320 aa11.2□□□□□ -0.62
CASC3-204ENST00000474190 EPC2Q52LR7 807 aa11.2□□□□□ -0.62
CASC3-204ENST00000474190 KCNT2Q6UVM3 1135 aa11.2□□□□□ -0.62
CASC3-204ENST00000474190 FIBCD1Q8N539 461 aa11.2□□□□□ -0.62
CASC3-204ENST00000474190 URGCPQ8TCY9 931 aa11.2□□□□□ -0.62
CASC3-204ENST00000474190 IGSF21Q96ID5 467 aa11.2□□□□□ -0.62
CASC3-204ENST00000474190 NAP1L5Q96NT1 182 aaPredicted RBP11.2□□□□□ -0.62
CASC3-204ENST00000474190 GPR62Q9BZJ7 368 aa11.2□□□□□ -0.62
CASC3-204ENST00000474190 METTL14Q9HCE5 456 aaKnown RBP11.2□□□□□ -0.62
CASC3-204ENST00000474190 DPP3Q9NY33 737 aa11.2□□□□□ -0.62
CASC3-204ENST00000474190 NME7Q9Y5B8 376 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms