RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 SPATA1Q5VX52 437 aa13.45□□□□□ -0.26
DDX56-209ENST00000473924 PLPP4Q5VZY2 271 aa13.45□□□□□ -0.26
DDX56-209ENST00000473924 KLHL10Q6JEL2 608 aa13.45□□□□□ -0.26
DDX56-209ENST00000473924 KIAA1841Q6NSI8 718 aa13.45□□□□□ -0.26
DDX56-209ENST00000473924 FUT10Q6P4F1 479 aa13.45□□□□□ -0.26
DDX56-209ENST00000473924 MAFAQ8NHW3 353 aaPredicted RBP13.45□□□□□ -0.26
DDX56-209ENST00000473924 CACTINQ8WUQ7 758 aaKnown RBP13.45□□□□□ -0.26
DDX56-209ENST00000473924 DHTKD1Q96HY7 919 aaPredicted RBP13.45□□□□□ -0.26
DDX56-209ENST00000473924 FBXL18Q96ME1 805 aa13.45□□□□□ -0.26
DDX56-209ENST00000473924 FNBP1Q96RU3 617 aa13.45□□□□□ -0.26
DDX56-209ENST00000473924 NSUN3Q9H649 340 aaKnown RBP13.45□□□□□ -0.26
DDX56-209ENST00000473924 NGRNQ9NPE2 291 aaKnown RBP13.45□□□□□ -0.26
DDX56-209ENST00000473924 TMEM189-UBE2V1I3L0A0 370 aa13.44□□□□□ -0.26
DDX56-209ENST00000473924 TRAPPC3O43617 180 aa13.44□□□□□ -0.26
DDX56-209ENST00000473924 CXCL14O95715 111 aa13.44□□□□□ -0.26
DDX56-209ENST00000473924 SOD2P04179 222 aa13.44□□□□□ -0.26
DDX56-209ENST00000473924 URODP06132 367 aa13.44□□□□□ -0.26
DDX56-209ENST00000473924 DLATP10515 647 aaKnown RBP13.44□□□□□ -0.26
DDX56-209ENST00000473924 LRPAP1P30533 357 aa13.44□□□□□ -0.26
DDX56-209ENST00000473924 GUCY2FP51841 1108 aa13.44□□□□□ -0.26
DDX56-209ENST00000473924 WNT7BP56706 349 aa13.44□□□□□ -0.26
DDX56-209ENST00000473924 ELAVL2Q12926 359 aaKnown RBP13.44□□□□□ -0.26
DDX56-209ENST00000473924 ADAM9Q13443 819 aa13.44□□□□□ -0.26
DDX56-209ENST00000473924 SMC1AQ14683 1233 aaKnown RBP13.44□□□□□ -0.26
DDX56-209ENST00000473924 SKIV2LQ15477 1246 aaKnown RBP13.44□□□□□ -0.26
DDX56-209ENST00000473924 EDRF1Q3B7T1 1238 aa13.44□□□□□ -0.26
DDX56-209ENST00000473924 CENPPQ6IPU0 288 aa13.44□□□□□ -0.26
DDX56-209ENST00000473924 EFCAB13Q8IY85 973 aa13.44□□□□□ -0.26
DDX56-209ENST00000473924 TMEM174Q8WUU8 243 aa13.44□□□□□ -0.26
DDX56-209ENST00000473924 CCDC127Q96BQ5 260 aa13.44□□□□□ -0.26
DDX56-209ENST00000473924 ANKRD36BP1Q96IX9 119 aa13.44□□□□□ -0.26
DDX56-209ENST00000473924 ZBP1Q9H171 429 aa13.44□□□□□ -0.26
DDX56-209ENST00000473924 DMAC2Q9NW81 257 aa13.44□□□□□ -0.26
DDX56-209ENST00000473924 DPP3Q9NY33 737 aa13.44□□□□□ -0.26
DDX56-209ENST00000473924 R3HCC1Q9Y3T6 440 aaKnown RBP13.44□□□□□ -0.26
DDX56-209ENST00000473924 PCDHGC5Q9Y5F6 944 aa13.44□□□□□ -0.26
DDX56-209ENST00000473924 CDH23Q9H251 3354 aa13.44□□□□□ -0.26
DDX56-209ENST00000473924 ANK1P16157 1881 aa13.44□□□□□ -0.26
DDX56-209ENST00000473924 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.43□□□□□ -0.26
DDX56-209ENST00000473924 C2CD2LO14523 706 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 FSCN2O14926 492 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 CETN3O15182 167 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 TNNC2P02585 160 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 CTSAP10619 480 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 CD44P16070 742 aaKnown RBP13.43□□□□□ -0.26
DDX56-209ENST00000473924 TNNI1P19237 187 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 PTMSP20962 102 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 BMP6P22004 513 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 CCNE1P24864 410 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 GLUD2P49448 558 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 CASP4P49662 377 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 LRRC63Q05C16 580 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 CYP24A1Q07973 514 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 PSMD6Q15008 389 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 NFIL3Q16649 462 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 USP41Q3LFD5 358 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 ZCWPW2Q504Y3 356 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 TCEAL5Q5H9L2 206 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 FAM171A1Q5VUB5 890 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 LMBRD2Q68DH5 695 aaPredicted RBP13.43□□□□□ -0.26
DDX56-209ENST00000473924 TAS1R1Q7RTX1 841 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 RBM23Q86U06 439 aaKnown RBP13.43□□□□□ -0.26
DDX56-209ENST00000473924 CEP57Q86XR8 500 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 WDR49Q8IV35 697 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 C3orf58Q8NDZ4 430 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 HERC2P3Q9BVR0 1158 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 VN1R3Q9BXE9 311 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 GPR62Q9BZJ7 368 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 MRPL17Q9NRX2 175 aaKnown RBP13.43□□□□□ -0.26
DDX56-209ENST00000473924 SSX2IPQ9Y2D8 614 aa13.43□□□□□ -0.26
DDX56-209ENST00000473924 TRANK1O15050 2925 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 BICDL2A1A5D9 508 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 TRIM49BA6NDI0 452 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 PPP1R3GB7ZBB8 358 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 KRT19P08727 400 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 PSMC2P35998 433 aaKnown RBP13.42□□□□□ -0.26
DDX56-209ENST00000473924 BRCC3P46736 316 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 FKBP3Q00688 224 aaKnown RBP13.42□□□□□ -0.26
DDX56-209ENST00000473924 DUOXA2Q1HG44 320 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 C9orf57Q5W0N0 161 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 ANKRD40Q6AI12 368 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 ADGRD2Q7Z7M1 963 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 USP37Q86T82 979 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 FAM186BQ8IYM0 893 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 TMEM130Q8N3G9 435 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 CSGALNACT2Q8N6G5 542 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 MRPL43Q8N983 215 aaKnown RBP13.42□□□□□ -0.26
DDX56-209ENST00000473924 NELFBQ8WX92 580 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 AUTS2Q8WXX7 1259 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 EEF2KMTQ96G04 330 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 B3GALT6Q96L58 329 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 MFSD14AQ96MC6 490 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 CGRRF1Q99675 332 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 MTMR12Q9C0I1 747 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 IGFLR1Q9H665 355 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 TLE6Q9H808 572 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 INTS13Q9NVM9 706 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 CTNND2Q9UQB3 1225 aa13.42□□□□□ -0.26
DDX56-209ENST00000473924 PRRC2BQ5JSZ5 2229 aaKnown RBP13.41□□□□□ -0.26
DDX56-209ENST00000473924 C2orf71A6NGG8 1288 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms