RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 TJP2Q9UDY2 1190 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 KLHL3Q9UH77 587 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 SLC30A1Q9Y6M5 507 aa5.5□□□□□ -1.53
TMEM39A-206ENST00000473684 hCG_2014768A0A024R1R8 64 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 SMIM31A0A1B0GVY4 71 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 RAB11FIP3O75154 756 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 PARNO95453 639 aaKnown RBP5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 KRT16P08779 473 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 CPA1P15085 419 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 GMPRP36959 345 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 BNIP1Q12981 228 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 SEPT7Q16181 437 aaKnown RBP5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 DDB1Q16531 1140 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 IMMTQ16891 758 aaKnown RBP5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 MTERF2Q49AM1 385 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 ZFYVE27Q5T4F4 411 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 ASRGL1Q7L266 308 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 PHLDB2Q86SQ0 1253 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 ST13P5Q8NFI4 369 aaPredicted RBP5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 SKA1Q96BD8 255 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 ZNF669Q96BR6 464 aaPredicted RBP5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 ZNF333Q96JL9 665 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 USP28Q96RU2 1077 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 LLPHQ9BRT6 129 aaKnown RBP5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 IL25Q9H293 177 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 EPB41L1Q9H4G0 881 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 PHAXQ9H814 394 aaKnown RBP5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 DISC1Q9NRI5 854 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 ETNK2Q9NVF9 386 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 STOML1Q9UBI4 398 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 PCDHA7Q9UN72 937 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 AGAP1Q9UPQ3 857 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 PCDHB2Q9Y5E7 798 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 ZMYM6O95789 1325 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 ITIH6Q6UXX5 1313 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 SERPINB7O75635 380 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 LCA5LO95447 670 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 YEATS4O95619 227 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 ATP1A1P05023 1023 aaKnown RBP5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 PABPC4LP0CB38 370 aaKnown RBP5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 PRLRP16471 622 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 HSPA9P38646 679 aaKnown RBP5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 VHLP40337 213 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 RGS2P41220 211 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 CTAG1AP78358 180 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 MSLNQ13421 630 aaPredicted RBP5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 DCTN2Q13561 401 aaKnown RBP5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 PLS1Q14651 629 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 KIF22Q14807 665 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 FAM133BQ5BKY9 247 aaKnown RBP5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 SPDYCQ5MJ68 293 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 WASHC2DQ5SRD0 308 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 ERMARDQ5T6L9 678 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 DEPDC1Q5TB30 811 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 LTV1Q96GA3 475 aaPredicted RBP5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 PBKQ96KB5 322 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 CCDC42Q96M95 316 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 XPO6Q96QU8 1125 aaKnown RBP5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 LNPEPQ9UIQ6 1025 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 TBC1D30Q9Y2I9 924 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 TSC22D4Q9Y3Q8 395 aa5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 RGPD8O14715 1765 aaPredicted RBP5.49□□□□□ -1.53
TMEM39A-206ENST00000473684 A0A0U1RQJ8 604 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 FGFR1OPO95684 399 aaKnown RBP5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 ZFYP08048 801 aaPredicted RBP5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 PYGMP11217 842 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 FOSL1P15407 271 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 GNAT2P19087 354 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 TRIM14Q14142 442 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 RCN2Q14257 317 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 R3HDM1Q15032 1099 aaKnown RBP5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 NDUFA5Q16718 116 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 AKAP4Q5JQC9 854 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 OLFML2BQ68BL8 750 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 CCSAPQ6IQ19 270 aaPredicted RBP5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 VHLLQ6RSH7 139 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 CLEC4GQ6UXB4 293 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 NEK10Q6ZWH5 1172 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 NLRP9Q7RTR0 991 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 SPATA24Q86W54 205 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 CROCCP3Q8IVE0 287 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 MRPL41Q8IXM3 137 aaKnown RBP5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 SLFN12Q8IYM2 578 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 CNTROBQ8N137 903 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 ENOX1Q8TC92 643 aaKnown RBP5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 PIGOQ8TEQ8 1089 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 NAT14Q8WUY8 206 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 USP6NLQ92738 828 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 TMEM87BQ96K49 555 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 ZNF317Q96PQ6 595 aaPredicted RBP5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 FANCD2OSQ96PS1 177 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 LRRC1Q9BTT6 524 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 RUSC1Q9BVN2 902 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 RTFDC1Q9BY42 306 aaPredicted RBP5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 TPK1Q9H3S4 243 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 TMEM260Q9NX78 707 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 TMEM94Q12767 1356 aa5.48□□□□□ -1.53
TMEM39A-206ENST00000473684 ESYT3A0FGR9 886 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms