RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 ATP6V1DQ9Y5K8 247 aa12.55□□□□□ -0.4
CPNE1-222ENST00000473373 DOCK6Q96HP0 2047 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 CCDC195A0A1B0GUA6 201 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 POLR2DO15514 142 aaKnown RBP12.54□□□□□ -0.4
CPNE1-222ENST00000473373 BRD1O95696 1058 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 ELF1P32519 619 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 RPL9P32969 192 aaKnown RBP12.54□□□□□ -0.4
CPNE1-222ENST00000473373 TNFSF9P41273 254 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 GTF2BQ00403 316 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 ALCAMQ13740 583 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 PKP1Q13835 747 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 POSTNQ15063 836 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 UPP1Q16831 310 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 IER5LQ5T953 404 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 ANKS3Q6ZW76 656 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 MAP4K3Q8IVH8 894 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 KREMEN2Q8NCW0 462 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 PRSS33Q8NF86 280 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 BEST2Q8NFU1 509 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 PIK3R5Q8WYR1 880 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 SUSD6Q92537 303 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 SMG7Q92540 1137 aaKnown RBP12.54□□□□□ -0.4
CPNE1-222ENST00000473373 C18orf25Q96B23 403 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-222ENST00000473373 SPATA32Q96LK8 384 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 PYM1Q9BRP8 204 aaKnown RBP12.54□□□□□ -0.4
CPNE1-222ENST00000473373 TNMDQ9H2S6 317 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 PLEKHA4Q9H4M7 779 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 PLEKHA5Q9HAU0 1116 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 RXFP1Q9HBX9 757 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 CHST7Q9NS84 486 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 FNIP2Q9P278 1114 aa12.54□□□□□ -0.4
CPNE1-222ENST00000473373 AGO2Q9UKV8 859 aaKnown RBP12.54□□□□□ -0.4
CPNE1-222ENST00000473373 UBQLN1Q9UMX0 589 aaKnown RBP12.54□□□□□ -0.4
CPNE1-222ENST00000473373 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-222ENST00000473373 MORC2Q9Y6X9 1032 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-222ENST00000473373 A0A087X0B3 334 aa12.53□□□□□ -0.4
CPNE1-222ENST00000473373 LACTBL1A8MY62 500 aa12.53□□□□□ -0.4
CPNE1-222ENST00000473373 H7C4K7 107 aa12.53□□□□□ -0.4
CPNE1-222ENST00000473373 TMEM189-UBE2V1I3L0A0 370 aa12.53□□□□□ -0.4
CPNE1-222ENST00000473373 TGM5O43548 720 aa12.53□□□□□ -0.4
CPNE1-222ENST00000473373 LILRB3O75022 631 aa12.53□□□□□ -0.4
CPNE1-222ENST00000473373 KCNE1P15382 129 aa12.53□□□□□ -0.4
CPNE1-222ENST00000473373 TKTP29401 623 aaKnown RBP12.53□□□□□ -0.4
CPNE1-222ENST00000473373 GBP2P32456 591 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-222ENST00000473373 ACOT2P49753 483 aa12.53□□□□□ -0.4
CPNE1-222ENST00000473373 SOX4Q06945 474 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-222ENST00000473373 NAB2Q15742 525 aa12.53□□□□□ -0.4
CPNE1-222ENST00000473373 SLC10A6Q3KNW5 377 aa12.53□□□□□ -0.4
CPNE1-222ENST00000473373 PPM1LQ5SGD2 360 aa12.53□□□□□ -0.4
CPNE1-222ENST00000473373 DSTYKQ6XUX3 929 aa12.53□□□□□ -0.4
CPNE1-222ENST00000473373 ZNF720Q7Z2F6 126 aa12.53□□□□□ -0.4
CPNE1-222ENST00000473373 USP37Q86T82 979 aa12.53□□□□□ -0.4
CPNE1-222ENST00000473373 RNF168Q8IYW5 571 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-222ENST00000473373 PBXIP1Q96AQ6 731 aa12.53□□□□□ -0.4
CPNE1-222ENST00000473373 ZMAT2Q96NC0 199 aaKnown RBP12.53□□□□□ -0.4
CPNE1-222ENST00000473373 TUBGCP4Q9UGJ1 667 aa12.53□□□□□ -0.4
CPNE1-222ENST00000473373 R3HCC1Q9Y3T6 440 aaKnown RBP12.53□□□□□ -0.4
CPNE1-222ENST00000473373 SCN1AP35498 2009 aa12.53□□□□□ -0.4
CPNE1-222ENST00000473373 WDFY4Q6ZS81 3184 aa12.53□□□□□ -0.4
CPNE1-222ENST00000473373 C5orf42Q9H799 3197 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 TMEM221A6NGB7 291 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 LOC730098B7Z3J9 87 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 ANKRD63C9JTQ0 380 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 M0R296 226 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 ABLIM1O14639 778 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 RFPL2O75678 378 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 PIGRP01833 764 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 OR1D2P34982 312 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 AFMP43652 599 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 TMEM132DQ14C87 1099 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 L1TD1Q5T7N2 865 aaKnown RBP12.52□□□□□ -0.41
CPNE1-222ENST00000473373 JADE1Q6IE81 842 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 ARMCX5Q6P1M9 558 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 SHC4Q6S5L8 630 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 ALKAL1Q6UXT8 129 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 C15orf39Q6ZRI6 1047 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 TRIM67Q6ZTA4 783 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 OTOP3Q7RTS5 596 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 GPR149Q86SP6 731 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 CD302Q8IX05 232 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 GPR65Q8IYL9 337 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 APPL2Q8NEU8 664 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 DNAJC19Q96DA6 116 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 TMEM206Q9H813 350 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 PCDHA7Q9UN72 937 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 CDY1Q9Y6F8 540 aa12.52□□□□□ -0.41
CPNE1-222ENST00000473373 A0A0B4J269 797 aa12.51□□□□□ -0.41
CPNE1-222ENST00000473373 C2CD4DB7Z1M9 353 aa12.51□□□□□ -0.41
CPNE1-222ENST00000473373 TISP43B9A030 160 aa12.51□□□□□ -0.41
CPNE1-222ENST00000473373 PRRG1O14668 218 aa12.51□□□□□ -0.41
CPNE1-222ENST00000473373 SYN3O14994 580 aa12.51□□□□□ -0.41
CPNE1-222ENST00000473373 XYLBO75191 536 aa12.51□□□□□ -0.41
CPNE1-222ENST00000473373 PRPF6O94906 941 aaKnown RBP12.51□□□□□ -0.41
CPNE1-222ENST00000473373 CLSTN1O94985 981 aa12.51□□□□□ -0.41
CPNE1-222ENST00000473373 LDHAP00338 332 aaKnown RBP12.51□□□□□ -0.41
CPNE1-222ENST00000473373 C8AP07357 584 aa12.51□□□□□ -0.41
CPNE1-222ENST00000473373 CPB1P15086 417 aa12.51□□□□□ -0.41
CPNE1-222ENST00000473373 FGFR3P22607 806 aa12.51□□□□□ -0.41
CPNE1-222ENST00000473373 ENOX2Q16206 610 aaKnown RBP12.51□□□□□ -0.41
CPNE1-222ENST00000473373 CTXN3Q4LDR2 81 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms