RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 SPPL3Q8TCT6 385 aa21.63■■□□□ 1.05
SF1-213ENST00000472725 PARD3BQ8TEW8 1205 aa21.63■■□□□ 1.05
SF1-213ENST00000472725 C18orf25Q96B23 403 aaPredicted RBP21.63■■□□□ 1.05
SF1-213ENST00000472725 ANKRD36BP1Q96IX9 119 aa21.63■■□□□ 1.05
SF1-213ENST00000472725 INTS13Q9NVM9 706 aa21.63■■□□□ 1.05
SF1-213ENST00000472725 MARCH5Q9NX47 278 aa21.63■■□□□ 1.05
SF1-213ENST00000472725 ADAM28Q9UKQ2 775 aa21.63■■□□□ 1.05
SF1-213ENST00000472725 PLXNA4Q9HCM2 1894 aa21.62■■□□□ 1.05
SF1-213ENST00000472725 TRIM49BA6NDI0 452 aa21.62■■□□□ 1.05
SF1-213ENST00000472725 PODXLO00592 558 aa21.62■■□□□ 1.05
SF1-213ENST00000472725 IKBKBO14920 756 aa21.62■■□□□ 1.05
SF1-213ENST00000472725 TRAPPC3O43617 180 aa21.62■■□□□ 1.05
SF1-213ENST00000472725 AKAP3O75969 853 aa21.62■■□□□ 1.05
SF1-213ENST00000472725 KRT13P13646 458 aa21.62■■□□□ 1.05
SF1-213ENST00000472725 CASP4P49662 377 aa21.62■■□□□ 1.05
SF1-213ENST00000472725 CLCNKBP51801 687 aa21.62■■□□□ 1.05
SF1-213ENST00000472725 SPAG1Q07617 926 aa21.62■■□□□ 1.05
SF1-213ENST00000472725 NFKBIBQ15653 356 aa21.62■■□□□ 1.05
SF1-213ENST00000472725 EFCAB13Q8IY85 973 aa21.62■■□□□ 1.05
SF1-213ENST00000472725 GPR65Q8IYL9 337 aa21.62■■□□□ 1.05
SF1-213ENST00000472725 FAM186BQ8IYM0 893 aa21.62■■□□□ 1.05
SF1-213ENST00000472725 GAS2L1Q99501 681 aaPredicted RBP21.62■■□□□ 1.05
SF1-213ENST00000472725 CGRRF1Q99675 332 aa21.62■■□□□ 1.05
SF1-213ENST00000472725 DUSP9Q99956 384 aaKnown RBP21.62■■□□□ 1.05
SF1-213ENST00000472725 METTL14Q9HCE5 456 aaKnown RBP21.62■■□□□ 1.05
SF1-213ENST00000472725 MTMR10Q9NXD2 777 aa21.62■■□□□ 1.05
SF1-213ENST00000472725 DPP3Q9NY33 737 aa21.62■■□□□ 1.05
SF1-213ENST00000472725 TUBGCP4Q9UGJ1 667 aa21.62■■□□□ 1.05
SF1-213ENST00000472725 ITGA11Q9UKX5 1188 aa21.62■■□□□ 1.05
SF1-213ENST00000472725 PRG3Q9Y2Y8 225 aaPredicted RBP21.62■■□□□ 1.05
SF1-213ENST00000472725 MYO9BQ13459 2157 aa21.62■■□□□ 1.05
SF1-213ENST00000472725 COL4A4P53420 1690 aaPredicted RBP21.62■■□□□ 1.05
SF1-213ENST00000472725 EPOPA6NHQ4 379 aa21.61■■□□□ 1.05
SF1-213ENST00000472725 NT5C1B-RDH14C9J2C7 533 aa21.61■■□□□ 1.05
SF1-213ENST00000472725 TADA2AO75478 443 aa21.61■■□□□ 1.05
SF1-213ENST00000472725 B3GAT3O94766 335 aa21.61■■□□□ 1.05
SF1-213ENST00000472725 GNA14O95837 355 aa21.61■■□□□ 1.05
SF1-213ENST00000472725 EFEMP2O95967 443 aa21.61■■□□□ 1.05
SF1-213ENST00000472725 TNNC2P02585 160 aa21.61■■□□□ 1.05
SF1-213ENST00000472725 TMEM191BP0C7N4 346 aa21.61■■□□□ 1.05
SF1-213ENST00000472725 TNNI1P19237 187 aa21.61■■□□□ 1.05
SF1-213ENST00000472725 PBX3P40426 434 aa21.61■■□□□ 1.05
SF1-213ENST00000472725 TFAMQ00059 246 aaKnown RBP21.61■■□□□ 1.05
SF1-213ENST00000472725 STX1AQ16623 288 aa21.61■■□□□ 1.05
SF1-213ENST00000472725 CSGALNACT2Q8N6G5 542 aa21.61■■□□□ 1.05
SF1-213ENST00000472725 MRPL38Q96DV4 380 aaKnown RBP21.61■■□□□ 1.05
SF1-213ENST00000472725 PRDM12Q9H4Q4 367 aa21.61■■□□□ 1.05
SF1-213ENST00000472725 SF3B1O75533 1304 aaKnown RBP eCLIP21.6■■□□□ 1.05
SF1-213ENST00000472725 ANO9A1A5B4 782 aa21.6■■□□□ 1.05
SF1-213ENST00000472725 LPXNO60711 386 aa21.6■■□□□ 1.05
SF1-213ENST00000472725 WNT7BP56706 349 aa21.6■■□□□ 1.05
SF1-213ENST00000472725 BFSP1Q12934 665 aa21.6■■□□□ 1.05
SF1-213ENST00000472725 TMEM173Q86WV6 379 aaPredicted RBP21.6■■□□□ 1.05
SF1-213ENST00000472725 RNF168Q8IYW5 571 aaPredicted RBP21.6■■□□□ 1.05
SF1-213ENST00000472725 POF1BQ8WVV4 589 aa21.6■■□□□ 1.05
SF1-213ENST00000472725 CCDC127Q96BQ5 260 aa21.6■■□□□ 1.05
SF1-213ENST00000472725 PAAF1Q9BRP4 392 aa21.6■■□□□ 1.05
SF1-213ENST00000472725 GOLGA2P5Q9HBQ8 144 aa21.6■■□□□ 1.05
SF1-213ENST00000472725 ALG13Q9NP73 1137 aaKnown RBP21.6■■□□□ 1.05
SF1-213ENST00000472725 NGRNQ9NPE2 291 aaKnown RBP21.6■■□□□ 1.05
SF1-213ENST00000472725 TLR9Q9NR96 1032 aa21.6■■□□□ 1.05
SF1-213ENST00000472725 SSX2IPQ9Y2D8 614 aa21.6■■□□□ 1.05
SF1-213ENST00000472725 PIRO00625 290 aa21.59■■□□□ 1.05
SF1-213ENST00000472725 GRM6O15303 877 aa21.59■■□□□ 1.05
SF1-213ENST00000472725 STX10O60499 249 aa21.59■■□□□ 1.05
SF1-213ENST00000472725 KIF4AO95239 1232 aa21.59■■□□□ 1.05
SF1-213ENST00000472725 DLATP10515 647 aaKnown RBP21.59■■□□□ 1.05
SF1-213ENST00000472725 PNPLA4P41247 253 aa21.59■■□□□ 1.05
SF1-213ENST00000472725 VAMP7P51809 220 aa21.59■■□□□ 1.05
SF1-213ENST00000472725 C9orf57Q5W0N0 161 aa21.59■■□□□ 1.05
SF1-213ENST00000472725 FUT10Q6P4F1 479 aa21.59■■□□□ 1.05
SF1-213ENST00000472725 FRMD5Q7Z6J6 570 aa21.59■■□□□ 1.05
SF1-213ENST00000472725 GDPD5Q8WTR4 605 aa21.59■■□□□ 1.05
SF1-213ENST00000472725 BORCS6Q96GS4 357 aa21.59■■□□□ 1.05
SF1-213ENST00000472725 ARHGEF37A1IGU5 675 aa21.58■■□□□ 1.05
SF1-213ENST00000472725 SOD2P04179 222 aa21.58■■□□□ 1.05
SF1-213ENST00000472725 CCDC192P0DO97 292 aa21.58■■□□□ 1.05
SF1-213ENST00000472725 GTF2H1P32780 548 aa21.58■■□□□ 1.05
SF1-213ENST00000472725 MARSP56192 900 aaKnown RBP21.58■■□□□ 1.05
SF1-213ENST00000472725 STX17P56962 302 aa21.58■■□□□ 1.05
SF1-213ENST00000472725 RBP5P82980 135 aa21.58■■□□□ 1.05
SF1-213ENST00000472725 Q7L0L9 218 aa21.58■■□□□ 1.05
SF1-213ENST00000472725 LRRC52Q8N7C0 313 aa21.58■■□□□ 1.05
SF1-213ENST00000472725 C1orf127Q8N9H9 656 aa21.58■■□□□ 1.05
SF1-213ENST00000472725 BCL7CQ8WUZ0 217 aaPredicted RBP21.58■■□□□ 1.05
SF1-213ENST00000472725 ZNF560Q96MR9 790 aa21.58■■□□□ 1.05
SF1-213ENST00000472725 FAM161BQ96MY7 647 aa21.58■■□□□ 1.05
SF1-213ENST00000472725 CDX2Q99626 313 aaPredicted RBP21.58■■□□□ 1.05
SF1-213ENST00000472725 HERC2P3Q9BVR0 1158 aa21.58■■□□□ 1.05
SF1-213ENST00000472725 MTMR12Q9C0I1 747 aa21.58■■□□□ 1.05
SF1-213ENST00000472725 GZF1Q9H116 711 aaPredicted RBP21.58■■□□□ 1.05
SF1-213ENST00000472725 ARMCX3Q9UH62 379 aaPredicted RBP21.58■■□□□ 1.05
SF1-213ENST00000472725 R3HCC1Q9Y3T6 440 aaKnown RBP21.58■■□□□ 1.05
SF1-213ENST00000472725 NUB1Q9Y5A7 615 aa21.58■■□□□ 1.05
SF1-213ENST00000472725 IRAK3Q9Y616 596 aa21.58■■□□□ 1.05
SF1-213ENST00000472725 CHD9Q3L8U1 2897 aa21.58■■□□□ 1.04
SF1-213ENST00000472725 LRRIQ3A6PVS8 624 aaPredicted RBP21.57■■□□□ 1.04
SF1-213ENST00000472725 CTSAP10619 480 aa21.57■■□□□ 1.04
SF1-213ENST00000472725 AARSP49588 968 aaKnown RBP eCLIP21.57■■□□□ 1.04
SF1-213ENST00000472725 TYRO3Q06418 890 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms