RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 NOMO3P69849 1222 aa8.84□□□□□ -0.99
SGCE-210ENST00000472326 SNAPC2Q13487 334 aa8.84□□□□□ -0.99
SGCE-210ENST00000472326 PABPC1LQ4VXU2 614 aaKnown RBP8.84□□□□□ -0.99
SGCE-210ENST00000472326 NOMO2Q5JPE7 1267 aa8.84□□□□□ -0.99
SGCE-210ENST00000472326 SPATA31D4Q6ZUB0 917 aa8.84□□□□□ -0.99
SGCE-210ENST00000472326 MRGPREQ86SM8 312 aa8.84□□□□□ -0.99
SGCE-210ENST00000472326 FITM2Q8N6M3 262 aa8.84□□□□□ -0.99
SGCE-210ENST00000472326 MLST8Q9BVC4 326 aa8.84□□□□□ -0.99
SGCE-210ENST00000472326 CALCOCO1Q9P1Z2 691 aa8.84□□□□□ -0.99
SGCE-210ENST00000472326 ELANEP08246 267 aa8.83□□□□□ -1
SGCE-210ENST00000472326 MTHFD1P11586 935 aaKnown RBP8.83□□□□□ -1
SGCE-210ENST00000472326 LAG3P18627 525 aa8.83□□□□□ -1
SGCE-210ENST00000472326 GCSHP23434 173 aa8.83□□□□□ -1
SGCE-210ENST00000472326 PTGS2P35354 604 aa8.83□□□□□ -1
SGCE-210ENST00000472326 ZNF267Q14586 743 aaPredicted RBP8.83□□□□□ -1
SGCE-210ENST00000472326 LRRC41Q15345 812 aa8.83□□□□□ -1
SGCE-210ENST00000472326 FLYWCH1Q4VC44 716 aa8.83□□□□□ -1
SGCE-210ENST00000472326 TIGD2Q4W5G0 525 aa8.83□□□□□ -1
SGCE-210ENST00000472326 SYNE4Q8N205 404 aa8.83□□□□□ -1
SGCE-210ENST00000472326 MARS2Q96GW9 593 aaKnown RBP8.83□□□□□ -1
SGCE-210ENST00000472326 LRGUKQ96M69 825 aa8.83□□□□□ -1
SGCE-210ENST00000472326 NUP88Q99567 741 aaPredicted RBP8.83□□□□□ -1
SGCE-210ENST00000472326 REXO4Q9GZR2 422 aaKnown RBP8.83□□□□□ -1
SGCE-210ENST00000472326 CDH19Q9H159 772 aa8.83□□□□□ -1
SGCE-210ENST00000472326 TMPRSS5Q9H3S3 457 aa8.83□□□□□ -1
SGCE-210ENST00000472326 USP25Q9UHP3 1055 aa8.83□□□□□ -1
SGCE-210ENST00000472326 ING1Q9UK53 422 aaPredicted RBP8.83□□□□□ -1
SGCE-210ENST00000472326 G3BP2Q9UN86 482 aaKnown RBP8.83□□□□□ -1
SGCE-210ENST00000472326 FZD1Q9UP38 647 aa8.83□□□□□ -1
SGCE-210ENST00000472326 PCDHA3Q9Y5H8 950 aa8.83□□□□□ -1
SGCE-210ENST00000472326 FPGT-TNNI3KV9GXZ4 949 aa8.83□□□□□ -1
SGCE-210ENST00000472326 E2F8A0AVK6 867 aa8.82□□□□□ -1
SGCE-210ENST00000472326 HAUS5O94927 633 aa8.82□□□□□ -1
SGCE-210ENST00000472326 MAKP20794 623 aa8.82□□□□□ -1
SGCE-210ENST00000472326 AKAP5P24588 427 aa8.82□□□□□ -1
SGCE-210ENST00000472326 MCM7P33993 719 aa8.82□□□□□ -1
SGCE-210ENST00000472326 ACVRL1P37023 503 aa8.82□□□□□ -1
SGCE-210ENST00000472326 GDF5P43026 501 aa8.82□□□□□ -1
SGCE-210ENST00000472326 ABHD18Q0P651 414 aa8.82□□□□□ -1
SGCE-210ENST00000472326 KLF10Q13118 480 aa8.82□□□□□ -1
SGCE-210ENST00000472326 PGS1Q32NB8 556 aa8.82□□□□□ -1
SGCE-210ENST00000472326 BEAN1Q3B7T3 259 aa8.82□□□□□ -1
SGCE-210ENST00000472326 IFIT1BQ5T764 474 aaKnown RBP8.82□□□□□ -1
SGCE-210ENST00000472326 LRRC55Q6ZSA7 311 aa8.82□□□□□ -1
SGCE-210ENST00000472326 RHOUQ7L0Q8 258 aa8.82□□□□□ -1
SGCE-210ENST00000472326 MAPKAPK5Q8IW41 473 aa8.82□□□□□ -1
SGCE-210ENST00000472326 GRAMD1CQ8IYS0 662 aa8.82□□□□□ -1
SGCE-210ENST00000472326 CPEB3Q8NE35 698 aaKnown RBP8.82□□□□□ -1
SGCE-210ENST00000472326 NEU4Q8WWR8 484 aaPredicted RBP8.82□□□□□ -1
SGCE-210ENST00000472326 RGMAQ96B86 450 aa8.82□□□□□ -1
SGCE-210ENST00000472326 MVB12AQ96EY5 273 aa8.82□□□□□ -1
SGCE-210ENST00000472326 SLC45A2Q9UMX9 530 aa8.82□□□□□ -1
SGCE-210ENST00000472326 CENPVL1A0A0U1RR11 272 aa8.81□□□□□ -1
SGCE-210ENST00000472326 A0A1B0GTW7 788 aa8.81□□□□□ -1
SGCE-210ENST00000472326 UNC119BA6NIH7 251 aa8.81□□□□□ -1
SGCE-210ENST00000472326 FTLP02792 175 aaPredicted RBP8.81□□□□□ -1
SGCE-210ENST00000472326 VCAM1P19320 739 aa8.81□□□□□ -1
SGCE-210ENST00000472326 FGFR4P22455 802 aa8.81□□□□□ -1
SGCE-210ENST00000472326 MAP2K6P52564 334 aa8.81□□□□□ -1
SGCE-210ENST00000472326 HSD11B2P80365 405 aa8.81□□□□□ -1
SGCE-210ENST00000472326 OCA2Q04671 838 aa8.81□□□□□ -1
SGCE-210ENST00000472326 UTP14CQ5TAP6 766 aaKnown RBP8.81□□□□□ -1
SGCE-210ENST00000472326 SLC4A10Q6U841 1118 aa8.81□□□□□ -1
SGCE-210ENST00000472326 C3orf20Q8ND61 904 aa8.81□□□□□ -1
SGCE-210ENST00000472326 NLGN4YQ8NFZ3 816 aaPredicted RBP8.81□□□□□ -1
SGCE-210ENST00000472326 PROKR1Q8TCW9 393 aa8.81□□□□□ -1
SGCE-210ENST00000472326 JDP2Q8WYK2 163 aa8.81□□□□□ -1
SGCE-210ENST00000472326 LARP4BQ92615 738 aaKnown RBP8.81□□□□□ -1
SGCE-210ENST00000472326 LENG9Q96B70 501 aa8.81□□□□□ -1
SGCE-210ENST00000472326 MYEOVQ96EZ4 313 aa8.81□□□□□ -1
SGCE-210ENST00000472326 PACSIN1Q9BY11 444 aa8.81□□□□□ -1
SGCE-210ENST00000472326 ANKFY1Q9P2R3 1169 aa8.81□□□□□ -1
SGCE-210ENST00000472326 GAGE12BA1L429 117 aa8.8□□□□□ -1
SGCE-210ENST00000472326 GAGE12HA6NDE8 117 aa8.8□□□□□ -1
SGCE-210ENST00000472326 NT5C1B-RDH14C9J2C7 533 aa8.8□□□□□ -1
SGCE-210ENST00000472326 F2RL2O00254 374 aa8.8□□□□□ -1
SGCE-210ENST00000472326 AKAP8O43823 692 aaKnown RBP8.8□□□□□ -1
SGCE-210ENST00000472326 AGFG2O95081 481 aa8.8□□□□□ -1
SGCE-210ENST00000472326 ABHD16AO95870 558 aa8.8□□□□□ -1
SGCE-210ENST00000472326 ADH4P08319 380 aa8.8□□□□□ -1
SGCE-210ENST00000472326 CKBP12277 381 aa8.8□□□□□ -1
SGCE-210ENST00000472326 SLFN5Q08AF3 891 aa8.8□□□□□ -1
SGCE-210ENST00000472326 NOGQ13253 232 aa8.8□□□□□ -1
SGCE-210ENST00000472326 KCNV1Q6PIU1 500 aa8.8□□□□□ -1
SGCE-210ENST00000472326 USP51Q70EK9 711 aa8.8□□□□□ -1
SGCE-210ENST00000472326 IL17RDQ8NFM7 739 aa8.8□□□□□ -1
SGCE-210ENST00000472326 HPS3Q969F9 1004 aa8.8□□□□□ -1
SGCE-210ENST00000472326 TLR10Q9BXR5 811 aa8.8□□□□□ -1
SGCE-210ENST00000472326 SLC12A5Q9H2X9 1139 aa8.8□□□□□ -1
SGCE-210ENST00000472326 RNPEPQ9H4A4 650 aa8.8□□□□□ -1
SGCE-210ENST00000472326 MAN1C1Q9NR34 630 aa8.8□□□□□ -1
SGCE-210ENST00000472326 PNMA8BQ9ULN7 279 aaPredicted RBP8.8□□□□□ -1
SGCE-210ENST00000472326 NOB1Q9ULX3 412 aaKnown RBP8.8□□□□□ -1
SGCE-210ENST00000472326 PPM1GO15355 546 aaPredicted RBP8.79□□□□□ -1
SGCE-210ENST00000472326 AP1G1O43747 822 aa8.79□□□□□ -1
SGCE-210ENST00000472326 CFIP05156 583 aa8.79□□□□□ -1
SGCE-210ENST00000472326 FCER1AP12319 257 aa8.79□□□□□ -1
SGCE-210ENST00000472326 SMARCA1P28370 1054 aa8.79□□□□□ -1
SGCE-210ENST00000472326 RESTQ13127 1097 aa8.79□□□□□ -1
SGCE-210ENST00000472326 B3GNTL1Q67FW5 361 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms