RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 TSC2P49815 1807 aa15.2■□□□□ 0.02
SSR4-207ENST00000471724 CASTOR2A6NHX0 329 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 C5orf67F2Z3F1 127 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 TMEM189-UBE2V1I3L0A0 370 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 TULP1O00294 542 aaPredicted RBP15.19■□□□□ 0.02
SSR4-207ENST00000471724 IKBKBO14920 756 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 RB1P06400 928 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 LINC00271P0C7V0 271 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 LRPAP1P30533 357 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 RPL9P32969 192 aaKnown RBP15.19■□□□□ 0.02
SSR4-207ENST00000471724 OR1G1P47890 313 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 SLC11A1P49279 550 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 ZNF165P49910 485 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 MARSP56192 900 aaKnown RBP15.19■□□□□ 0.02
SSR4-207ENST00000471724 WNT7BP56706 349 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 ERVK-21P61565 698 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 CLDN10P78369 228 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 SPAG1Q07617 926 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 GRIN2CQ14957 1233 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 DUOXA2Q1HG44 320 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 MYLIPQ8WY64 445 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 EEF2KMTQ96G04 330 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 CNOT6LQ96LI5 555 aaKnown RBP15.19■□□□□ 0.02
SSR4-207ENST00000471724 MED15Q96RN5 788 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 C11orf84Q9BUA3 381 aaPredicted RBP15.19■□□□□ 0.02
SSR4-207ENST00000471724 MTMR12Q9C0I1 747 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 GZF1Q9H116 711 aaPredicted RBP15.19■□□□□ 0.02
SSR4-207ENST00000471724 INTS13Q9NVM9 706 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 MAGEC2Q9UBF1 373 aaPredicted RBP15.19■□□□□ 0.02
SSR4-207ENST00000471724 DNAJB4Q9UDY4 337 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 STK39Q9UEW8 545 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 FAN1Q9Y2M0 1017 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 NFE2L3Q9Y4A8 694 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 SCN1AP35498 2009 aa15.19■□□□□ 0.02
SSR4-207ENST00000471724 ATG2AQ2TAZ0 1938 aa15.18■□□□□ 0.02
SSR4-207ENST00000471724 LRRIQ3A6PVS8 624 aaPredicted RBP15.18■□□□□ 0.02
SSR4-207ENST00000471724 B4GALT3O60512 393 aa15.18■□□□□ 0.02
SSR4-207ENST00000471724 ALDH2P05091 517 aa15.18■□□□□ 0.02
SSR4-207ENST00000471724 GALTP07902 379 aa15.18■□□□□ 0.02
SSR4-207ENST00000471724 PAX3P23760 479 aa15.18■□□□□ 0.02
SSR4-207ENST00000471724 BMPR1AP36894 532 aa15.18■□□□□ 0.02
SSR4-207ENST00000471724 SOX4Q06945 474 aaPredicted RBP15.18■□□□□ 0.02
SSR4-207ENST00000471724 DCAF17Q5H9S7 520 aaPredicted RBP15.18■□□□□ 0.02
SSR4-207ENST00000471724 TCERG1LQ5VWI1 586 aa15.18■□□□□ 0.02
SSR4-207ENST00000471724 LRSAM1Q6UWE0 723 aa15.18■□□□□ 0.02
SSR4-207ENST00000471724 SLC39A11Q8N1S5 342 aa15.18■□□□□ 0.02
SSR4-207ENST00000471724 AOPEPQ8N6M6 819 aa15.18■□□□□ 0.02
SSR4-207ENST00000471724 FBXO22Q8NEZ5 403 aa15.18■□□□□ 0.02
SSR4-207ENST00000471724 C18orf25Q96B23 403 aaPredicted RBP15.18■□□□□ 0.02
SSR4-207ENST00000471724 BORCS6Q96GS4 357 aa15.18■□□□□ 0.02
SSR4-207ENST00000471724 TMEM169Q96HH4 297 aa15.18■□□□□ 0.02
SSR4-207ENST00000471724 ZNF560Q96MR9 790 aa15.18■□□□□ 0.02
SSR4-207ENST00000471724 ANP32EQ9BTT0 268 aa15.18■□□□□ 0.02
SSR4-207ENST00000471724 COLEC11Q9BWP8 271 aa15.18■□□□□ 0.02
SSR4-207ENST00000471724 GOLGA2P5Q9HBQ8 144 aa15.18■□□□□ 0.02
SSR4-207ENST00000471724 DPP3Q9NY33 737 aa15.18■□□□□ 0.02
SSR4-207ENST00000471724 SPG21Q9NZD8 308 aa15.18■□□□□ 0.02
SSR4-207ENST00000471724 R3HCC1Q9Y3T6 440 aaKnown RBP15.18■□□□□ 0.02
SSR4-207ENST00000471724 PTPRJQ12913 1337 aa15.17■□□□□ 0.02
SSR4-207ENST00000471724 SMTNL1A8MU46 457 aa15.17■□□□□ 0.02
SSR4-207ENST00000471724 PODXLO00592 558 aa15.17■□□□□ 0.02
SSR4-207ENST00000471724 NRP1O14786 923 aa15.17■□□□□ 0.02
SSR4-207ENST00000471724 ARHGEF15O94989 841 aa15.17■□□□□ 0.02
SSR4-207ENST00000471724 GTF2H1P32780 548 aa15.17■□□□□ 0.02
SSR4-207ENST00000471724 PNPLA4P41247 253 aa15.17■□□□□ 0.02
SSR4-207ENST00000471724 ZNF445P59923 1031 aa15.17■□□□□ 0.02
SSR4-207ENST00000471724 MCCD1P59942 119 aaPredicted RBP15.17■□□□□ 0.02
SSR4-207ENST00000471724 UPP1Q16831 310 aa15.17■□□□□ 0.02
SSR4-207ENST00000471724 EPC2Q52LR7 807 aa15.17■□□□□ 0.02
SSR4-207ENST00000471724 PLEKHO2Q8TD55 490 aa15.17■□□□□ 0.02
SSR4-207ENST00000471724 C17orf80Q9BSJ5 609 aa15.17■□□□□ 0.02
SSR4-207ENST00000471724 TSPY26PQ9H489 355 aa15.17■□□□□ 0.02
SSR4-207ENST00000471724 PRDM12Q9H4Q4 367 aa15.17■□□□□ 0.02
SSR4-207ENST00000471724 PRG3Q9Y2Y8 225 aaPredicted RBP15.17■□□□□ 0.02
SSR4-207ENST00000471724 VWA8A3KMH1 1905 aa15.17■□□□□ 0.02
SSR4-207ENST00000471724 SF3B1O75533 1304 aaKnown RBP eCLIP15.17■□□□□ 0.02
SSR4-207ENST00000471724 MYO9BQ13459 2157 aa15.17■□□□□ 0.02
SSR4-207ENST00000471724 BECN2A8MW95 431 aa15.16■□□□□ 0.02
SSR4-207ENST00000471724 N4BP1O75113 896 aaKnown RBP15.16■□□□□ 0.02
SSR4-207ENST00000471724 B3GAT3O94766 335 aa15.16■□□□□ 0.02
SSR4-207ENST00000471724 KIF4AO95239 1232 aa15.16■□□□□ 0.02
SSR4-207ENST00000471724 ITGB3P05106 788 aa15.16■□□□□ 0.02
SSR4-207ENST00000471724 TRIM49P0CI25 452 aa15.16■□□□□ 0.02
SSR4-207ENST00000471724 TRIM49CP0CI26 452 aa15.16■□□□□ 0.02
SSR4-207ENST00000471724 EEF1GP26641 437 aaKnown RBP15.16■□□□□ 0.02
SSR4-207ENST00000471724 PBX3P40426 434 aa15.16■□□□□ 0.02
SSR4-207ENST00000471724 MXI1P50539 228 aa15.16■□□□□ 0.02
SSR4-207ENST00000471724 CLCNKBP51801 687 aa15.16■□□□□ 0.02
SSR4-207ENST00000471724 TPM4P67936 248 aa15.16■□□□□ 0.02
SSR4-207ENST00000471724 KRT17Q04695 432 aa15.16■□□□□ 0.02
SSR4-207ENST00000471724 UBE3AQ05086 875 aa15.16■□□□□ 0.02
SSR4-207ENST00000471724 ELAVL2Q12926 359 aaKnown RBP15.16■□□□□ 0.02
SSR4-207ENST00000471724 BIRC3Q13489 604 aa15.16■□□□□ 0.02
SSR4-207ENST00000471724 C9orf57Q5W0N0 161 aa15.16■□□□□ 0.02
SSR4-207ENST00000471724 LMBRD2Q68DH5 695 aaPredicted RBP15.16■□□□□ 0.02
SSR4-207ENST00000471724 DCLRE1AQ6PJP8 1040 aa15.16■□□□□ 0.02
SSR4-207ENST00000471724 TRIM59Q8IWR1 403 aa15.16■□□□□ 0.02
SSR4-207ENST00000471724 LRRC52Q8N7C0 313 aa15.16■□□□□ 0.02
SSR4-207ENST00000471724 C1orf127Q8N9H9 656 aa15.16■□□□□ 0.02
SSR4-207ENST00000471724 ANKRD20A12PQ8NF67 263 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms