RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-208ENST00000471438 LPIN2Q92539 896 aa4.03□□□□□ -1.76
CSMD2-208ENST00000471438 ANKS1AQ92625 1134 aa4.03□□□□□ -1.76
CSMD2-208ENST00000471438 PHKBQ93100 1093 aa4.03□□□□□ -1.76
CSMD2-208ENST00000471438 IQCDQ96DY2 449 aa4.03□□□□□ -1.76
CSMD2-208ENST00000471438 DNAJC7Q99615 494 aa4.03□□□□□ -1.76
CSMD2-208ENST00000471438 CSRNP2Q9H175 543 aa4.03□□□□□ -1.76
CSMD2-208ENST00000471438 RNF41Q9H4P4 317 aaPredicted RBP4.03□□□□□ -1.76
CSMD2-208ENST00000471438 HAUS4Q9H6D7 363 aa4.03□□□□□ -1.76
CSMD2-208ENST00000471438 RBM28Q9NW13 759 aaKnown RBP4.03□□□□□ -1.76
CSMD2-208ENST00000471438 PODXL2Q9NZ53 605 aa4.03□□□□□ -1.76
CSMD2-208ENST00000471438 ST6GALNAC2Q9UJ37 374 aa4.03□□□□□ -1.76
CSMD2-208ENST00000471438 ING1Q9UK53 422 aaPredicted RBP4.03□□□□□ -1.76
CSMD2-208ENST00000471438 HDAC9Q9UKV0 1011 aa4.03□□□□□ -1.76
CSMD2-208ENST00000471438 CAPN11Q9UMQ6 739 aa4.03□□□□□ -1.76
CSMD2-208ENST00000471438 GPR55Q9Y2T6 319 aaPredicted RBP4.03□□□□□ -1.76
CSMD2-208ENST00000471438 PCDHB6Q9Y5E3 794 aa4.03□□□□□ -1.76
CSMD2-208ENST00000471438 SLC12A7Q9Y666 1083 aa4.03□□□□□ -1.76
CSMD2-208ENST00000471438 COL5A3P25940 1745 aaPredicted RBP4.03□□□□□ -1.76
CSMD2-208ENST00000471438 ADAMTSL1Q8N6G6 1762 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 ZNF804BA4D1E1 1349 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 ZDBF2Q9HCK1 2354 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 LY75O60449 1722 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 MYH4Q9Y623 1939 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 A0A087X0B3 334 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 A0A1W2PPC1 479 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 ANO9A1A5B4 782 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 IQCA1LA6NCM1 817 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 TRIM75PA6NK02 468 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 SRRM3A6NNA2 597 aaPredicted RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 H3BQF6 201 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 IFIT3O14879 490 aaKnown RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 ZNF205O95201 554 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 SYF2O95926 243 aaKnown RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 RECKO95980 971 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 AMHP03971 560 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 VAV1P15498 845 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 XBP1P17861 261 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 EEF1GP26641 437 aaKnown RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 TNFRSF8P28908 595 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 GUCY1A2P33402 732 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 PPP1R2P41236 205 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 MAGEA9P43362 315 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 NOP2P46087 812 aaKnown RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 COPB1P53618 953 aaKnown RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 ZNF200P98182 395 aaPredicted RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 GRIN1Q05586 938 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 HNRNPA0Q13151 305 aaKnown RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 CBX2Q14781 532 aaPredicted RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 CASP8Q14790 479 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 MTF1Q14872 753 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 KIR3DS1Q14943 382 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 WTAPQ15007 396 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 SART3Q15020 963 aaKnown RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 PUM3Q15397 648 aaKnown RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 SMN1Q16637 294 aaKnown RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 HSF5Q4G112 596 aaPredicted RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 TBC1D10BQ4KMP7 808 aaPredicted RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 DALRD3Q5D0E6 543 aaKnown RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 TCP11X2Q5H9J9 407 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 METTL24Q5JXM2 366 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 NOL9Q5SY16 702 aaKnown RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 HLA-DQA1Q5Y7H0 255 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 ISM2Q6H9L7 571 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 FBXO46Q6PJ61 603 aaPredicted RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 ZC3H14Q6PJT7 736 aaKnown RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 RPTNQ6XPR3 784 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 LDHAL6AQ6ZMR3 332 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 MFSD6Q6ZSS7 791 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 USP49Q70CQ1 688 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 TMEM192Q8IY95 271 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 CCDC170Q8IYT3 715 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 CARFQ8N187 725 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 MMGT1Q8N4V1 131 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 SPATA5Q8NB90 893 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 NUP43Q8NFH3 380 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 CCDC12Q8WUD4 166 aaPredicted RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 FERD3LQ96RJ6 166 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 PNKPQ96T60 521 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 NAPGQ99747 312 aaPredicted RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 NUP58Q9BVL2 599 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 BRIP1Q9BX63 1249 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 C1QTNF1Q9BXJ1 281 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 SLC26A6Q9BXS9 759 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 EDEM3Q9BZQ6 932 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 PRO3102Q9H379 93 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 ACBD3Q9H3P7 528 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 THAP9Q9H5L6 903 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 YY1AP1Q9H869 796 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 SH3GLB2Q9NR46 395 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 METTL5Q9NRN9 209 aaKnown RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 ABHD10Q9NUJ1 306 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 RMND1Q9NWS8 449 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 SAGE1Q9NXZ1 904 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 SUCOQ9UBS9 1254 aaKnown RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 DENND2AQ9ULE3 1009 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 ZNRF3Q9ULT6 936 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 MYO6Q9UM54 1294 aa4.02□□□□□ -1.77
CSMD2-208ENST00000471438 REXO2Q9Y3B8 237 aaKnown RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 EPN1Q9Y6I3 576 aaPredicted RBP4.02□□□□□ -1.77
CSMD2-208ENST00000471438 MYH14Q7Z406 1995 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms