RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 MATR3P43243 847 aaKnown RBP eCLIP14.72□□□□□ -0.05
HMGN1-211ENST00000471260 LIG4P49917 911 aa14.72□□□□□ -0.05
HMGN1-211ENST00000471260 TDGQ13569 410 aa14.72□□□□□ -0.05
HMGN1-211ENST00000471260 DHX8Q14562 1220 aaKnown RBP14.72□□□□□ -0.05
HMGN1-211ENST00000471260 PPM1LQ5SGD2 360 aa14.72□□□□□ -0.05
HMGN1-211ENST00000471260 KRI1Q8N9T8 703 aaKnown RBP14.72□□□□□ -0.05
HMGN1-211ENST00000471260 SPRYD3Q8NCJ5 442 aa14.72□□□□□ -0.05
HMGN1-211ENST00000471260 C3orf58Q8NDZ4 430 aa14.72□□□□□ -0.05
HMGN1-211ENST00000471260 LRRC15Q8TF66 581 aa14.72□□□□□ -0.05
HMGN1-211ENST00000471260 NUB1Q9Y5A7 615 aa14.72□□□□□ -0.05
HMGN1-211ENST00000471260 VWA8A3KMH1 1905 aa14.72□□□□□ -0.05
HMGN1-211ENST00000471260 TRIOO75962 3097 aa14.72□□□□□ -0.05
HMGN1-211ENST00000471260 TTC26A0AVF1 554 aa14.71□□□□□ -0.05
HMGN1-211ENST00000471260 H7C4K7 107 aa14.71□□□□□ -0.05
HMGN1-211ENST00000471260 K7ENM7 598 aa14.71□□□□□ -0.05
HMGN1-211ENST00000471260 HNRNPDLO14979 420 aaKnown RBP14.71□□□□□ -0.05
HMGN1-211ENST00000471260 XPOTO43592 962 aaKnown RBP14.71□□□□□ -0.05
HMGN1-211ENST00000471260 XYLBO75191 536 aa14.71□□□□□ -0.05
HMGN1-211ENST00000471260 C8AP07357 584 aa14.71□□□□□ -0.05
HMGN1-211ENST00000471260 MYBP10242 640 aa14.71□□□□□ -0.05
HMGN1-211ENST00000471260 HARSP12081 509 aaKnown RBP14.71□□□□□ -0.05
HMGN1-211ENST00000471260 CYP3A5P20815 502 aa14.71□□□□□ -0.05
HMGN1-211ENST00000471260 TKTP29401 623 aaKnown RBP14.71□□□□□ -0.05
HMGN1-211ENST00000471260 HOXD11P31277 338 aaPredicted RBP14.71□□□□□ -0.05
HMGN1-211ENST00000471260 GBP2P32456 591 aaPredicted RBP14.71□□□□□ -0.05
HMGN1-211ENST00000471260 GTF2BQ00403 316 aa14.71□□□□□ -0.05
HMGN1-211ENST00000471260 KLHL40Q2TBA0 621 aa14.71□□□□□ -0.05
HMGN1-211ENST00000471260 SLC8B1Q6J4K2 584 aa14.71□□□□□ -0.05
HMGN1-211ENST00000471260 CD302Q8IX05 232 aa14.71□□□□□ -0.05
HMGN1-211ENST00000471260 EPSTI1Q96J88 318 aa14.71□□□□□ -0.05
HMGN1-211ENST00000471260 SUSD3Q96L08 255 aa14.71□□□□□ -0.05
HMGN1-211ENST00000471260 IRF2BPLQ9H1B7 796 aa14.71□□□□□ -0.05
HMGN1-211ENST00000471260 ST6GALNAC4Q9H4F1 302 aa14.71□□□□□ -0.05
HMGN1-211ENST00000471260 FBXO2Q9UK22 296 aaPredicted RBP14.71□□□□□ -0.05
HMGN1-211ENST00000471260 DUSP12Q9UNI6 340 aa14.71□□□□□ -0.05
HMGN1-211ENST00000471260 MTMR6Q9Y217 621 aa14.71□□□□□ -0.05
HMGN1-211ENST00000471260 CDY1Q9Y6F8 540 aa14.71□□□□□ -0.05
HMGN1-211ENST00000471260 ZDBF2Q9HCK1 2354 aa14.7□□□□□ -0.06
HMGN1-211ENST00000471260 OGTO15294 1046 aa14.7□□□□□ -0.06
HMGN1-211ENST00000471260 MEFVO15553 781 aaPredicted RBP14.7□□□□□ -0.06
HMGN1-211ENST00000471260 STX6O43752 255 aa14.7□□□□□ -0.06
HMGN1-211ENST00000471260 N4BP1O75113 896 aaKnown RBP14.7□□□□□ -0.06
HMGN1-211ENST00000471260 ADRB2P07550 413 aa14.7□□□□□ -0.06
HMGN1-211ENST00000471260 IGFBP6P24592 240 aaPredicted RBP14.7□□□□□ -0.06
HMGN1-211ENST00000471260 MARCKSP29966 332 aaPredicted RBP14.7□□□□□ -0.06
HMGN1-211ENST00000471260 AVPR2P30518 371 aa14.7□□□□□ -0.06
HMGN1-211ENST00000471260 LRPAP1P30533 357 aa14.7□□□□□ -0.06
HMGN1-211ENST00000471260 BRCC3P46736 316 aa14.7□□□□□ -0.06
HMGN1-211ENST00000471260 PTPN5P54829 565 aa14.7□□□□□ -0.06
HMGN1-211ENST00000471260 POU5F1Q01860 360 aaKnown RBP14.7□□□□□ -0.06
HMGN1-211ENST00000471260 PPP2R3AQ06190 1150 aa14.7□□□□□ -0.06
HMGN1-211ENST00000471260 MRPL58Q14197 206 aaKnown RBP14.7□□□□□ -0.06
HMGN1-211ENST00000471260 SLC39A14Q15043 492 aa14.7□□□□□ -0.06
HMGN1-211ENST00000471260 AXDND1Q5T1B0 1012 aaPredicted RBP14.7□□□□□ -0.06
HMGN1-211ENST00000471260 MAP4K3Q8IVH8 894 aa14.7□□□□□ -0.06
HMGN1-211ENST00000471260 ZNF461Q8TAF7 563 aa14.7□□□□□ -0.06
HMGN1-211ENST00000471260 FIZ1Q96SL8 496 aa14.7□□□□□ -0.06
HMGN1-211ENST00000471260 OXCT2Q9BYC2 517 aaPredicted RBP14.7□□□□□ -0.06
HMGN1-211ENST00000471260 SEL1LQ9UBV2 794 aa14.7□□□□□ -0.06
HMGN1-211ENST00000471260 UBQLN1Q9UMX0 589 aaKnown RBP14.7□□□□□ -0.06
HMGN1-211ENST00000471260 A0A0B4J269 797 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 ADAM12O43184 909 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 TBC1D4O60343 1298 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 ABLIM3O94929 683 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 CXCL8P10145 99 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 LAMP2P13473 410 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 PAX3P23760 479 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 FSHRP23945 695 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 NHLH1Q02575 133 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 ZBTB6Q15916 424 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 SEZ6Q53EL9 994 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 VARS2Q5ST30 1063 aaKnown RBP14.69□□□□□ -0.06
HMGN1-211ENST00000471260 RRAGBQ5VZM2 374 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 SLFN12LQ6IEE8 588 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 CCDC73Q6ZRK6 1079 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 SV2BQ7L1I2 683 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 APPL2Q8NEU8 664 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 SLC7A14Q8TBB6 771 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 C18orf25Q96B23 403 aaPredicted RBP14.69□□□□□ -0.06
HMGN1-211ENST00000471260 HVCN1Q96D96 273 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 MYADMQ96S97 322 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 HAPLN2Q9GZV7 340 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 ZHX3Q9H4I2 956 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 RPF1Q9H9Y2 349 aaKnown RBP14.69□□□□□ -0.06
HMGN1-211ENST00000471260 MAFFQ9ULX9 164 aa14.69□□□□□ -0.06
HMGN1-211ENST00000471260 I3L4J1 428 aa14.68□□□□□ -0.06
HMGN1-211ENST00000471260 FAM189A1O60320 539 aa14.68□□□□□ -0.06
HMGN1-211ENST00000471260 ATF2P15336 505 aa14.68□□□□□ -0.06
HMGN1-211ENST00000471260 ELF1P32519 619 aa14.68□□□□□ -0.06
HMGN1-211ENST00000471260 CLCN5P51795 746 aa14.68□□□□□ -0.06
HMGN1-211ENST00000471260 ROR1Q01973 937 aa14.68□□□□□ -0.06
HMGN1-211ENST00000471260 SPECC1Q5M775 1068 aa14.68□□□□□ -0.06
HMGN1-211ENST00000471260 IER5LQ5T953 404 aa14.68□□□□□ -0.06
HMGN1-211ENST00000471260 TPGS2Q68CL5 300 aa14.68□□□□□ -0.06
HMGN1-211ENST00000471260 FAM173BQ6P4H8 233 aa14.68□□□□□ -0.06
HMGN1-211ENST00000471260 USP49Q70CQ1 688 aa14.68□□□□□ -0.06
HMGN1-211ENST00000471260 ZNF720Q7Z2F6 126 aa14.68□□□□□ -0.06
HMGN1-211ENST00000471260 GRASPQ7Z6J2 395 aaPredicted RBP14.68□□□□□ -0.06
HMGN1-211ENST00000471260 DDX12PQ92771 950 aa14.68□□□□□ -0.06
HMGN1-211ENST00000471260 KIF12Q96FN5 646 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms